Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400042400 Solanum tuberosum HOM05D013904 ORTHO05D000034 3.0e-93 345.1 172 100.0
PGSC0003DMG400046051 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.5e-19 97.8 78 73.1
PGSC0003DMG400041819 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.7e-17 92.0 83 63.9
PGSC0003DMG400023037 Solanum tuberosum HOM05D008583 ORTHO05D000017 1.8e-16 90.1 116 47.4
PGSC0003DMG400041217 Solanum tuberosum HOM05D007862 ORTHO05D003926 1.1e-15 87.4 117 51.3
PGSC0003DMG400042116 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.7e-15 85.1 76 63.2
PGSC0003DMG400043881 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.7e-15 84.3 67 64.2
Sopen01g014670 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-14 82.4 78 56.4
Sopen11g015700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-13 80.9 76 60.5
PGSC0003DMG400043979 Solanum tuberosum HOM05D008583 ORTHO05D395714 1.1e-13 80.9 64 65.6
PGSC0003DMG400045061 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.8e-13 80.1 57 77.2
Sopen05g025230 Solanum pennellii HOM05D000004 ORTHO05D000034 2.4e-13 79.7 73 58.9
PGSC0003DMG400043804 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.4e-13 79.7 52 76.9
PGSC0003DMG400041207 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.3e-13 78.6 57 73.7
PGSC0003DMG400036459 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-12 77.4 53 71.7
PGSC0003DMG400045957 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-12 77.4 68 66.2
PGSC0003DMG400042923 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.5e-12 77.0 56 67.9
PGSC0003DMG400043066 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.5e-12 77.0 51 74.5
PGSC0003DMG400042195 Solanum tuberosum HOM05D009555 ORTHO05D000034 2.0e-12 76.6 72 59.7
PGSC0003DMG400001949 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.4e-12 75.9 75 57.3
PGSC0003DMG400039651 Solanum tuberosum HOM05D013904 ORTHO05D000034 3.4e-12 75.9 70 61.4
PGSC0003DMG400047177 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.4e-12 75.9 51 70.6
PGSC0003DMG400037192 Solanum tuberosum HOM05D018243 ORTHO05D000034 5.9e-12 75.1 51 74.5
Sopen06g017100 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-11 74.3 73 53.4
PGSC0003DMG400004450 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.3e-11 73.9 52 73.1
PGSC0003DMG400037261 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.3e-11 73.9 68 60.3
PGSC0003DMG400035000 Solanum tuberosum HOM05D010676 ORTHO05D000034 1.7e-11 73.6 60 60.0
PGSC0003DMG400037125 Solanum tuberosum HOM05D033001 ORTHO05D398289 1.7e-11 73.6 75 52.0
PGSC0003DMG400036035 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.2e-11 73.2 50 74.0
PGSC0003DMG400040385 Solanum tuberosum HOM05D008583 ORTHO05D010950 2.9e-11 72.8 67 61.2
PGSC0003DMG400045566 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.9e-11 72.8 58 63.8
PGSC0003DMG400042713 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.8e-11 72.4 52 71.2
Sopen01g013780 Solanum pennellii HOM05D000004 ORTHO05D000034 5.0e-11 72.0 50 70.0
PGSC0003DMG400035546 Solanum tuberosum HOM05D000004 ORTHO05D000034 6.5e-11 71.6 60 65.0
PGSC0003DMG400045047 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.5e-11 71.2 51 72.5
PGSC0003DMG400045596 Solanum tuberosum HOM05D008583 ORTHO05D017134 8.5e-11 71.2 53 69.8
Sopen01g013730 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-10 70.5 53 66.0
Sopen04g013250 Solanum pennellii HOM05D000004 ORTHO05D000034 1.9e-10 70.1 49 71.4
PGSC0003DMG400041295 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.9e-10 70.1 52 71.2
Sopen03g014770 Solanum pennellii HOM05D000004 ORTHO05D000034 3.2e-10 69.3 69 53.6
PGSC0003DMG400040796 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.2e-10 69.3 56 64.3
Sopen02g009680 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-10 68.6 49 69.4
Sopen07g019770 Solanum pennellii HOM05D000004 ORTHO05D000034 5.5e-10 68.6 49 71.4
Sopen08g006070 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-10 68.6 54 64.8
PGSC0003DMG400038935 Solanum tuberosum HOM05D005093 ORTHO05D000034 5.5e-10 68.6 48 72.9
PGSC0003DMG400045091 Solanum tuberosum HOM05D010676 ORTHO05D012196 5.5e-10 68.6 130 40.0
PGSC0003DMG400009616 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.2e-10 68.2 60 61.7
PGSC0003DMG400037198 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.4e-10 67.8 69 56.5
Sopen09g015880 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-09 67.4 49 71.4
Sopen01g027000 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-09 67.0 49 69.4
PGSC0003DMG400042934 Solanum tuberosum HOM05D010988 ORTHO05D000034 1.6e-09 67.0 61 60.7
Sopen01g015130 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-09 66.6 49 65.3
Sopen09g023490 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-09 66.6 49 65.3
Sopen12g009440 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-09 66.6 48 70.8
PGSC0003DMG400041566 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.7e-09 66.2 61 63.9
Sopen10g019300 Solanum pennellii HOM05D000004 ORTHO05D000034 4.7e-09 65.5 51 66.7
Sopen08g005740 Solanum pennellii HOM05D000004 ORTHO05D000034 6.1e-09 65.1 49 67.3
Sopen10g024100 Solanum pennellii HOM05D000004 ORTHO05D000034 6.1e-09 65.1 48 68.8
Sopen12g009470 Solanum pennellii HOM05D000004 ORTHO05D000002 8.0e-09 64.7 52 63.5
PGSC0003DMG400042105 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.0e-09 64.7 46 73.9
Sopen01g024020 Solanum pennellii HOM05D000004 ORTHO05D000034 1.0e-08 64.3 49 65.3
Sopen06g012850 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 64.3 49 65.3
Sopen10g026670 Solanum pennellii HOM05D000004 ORTHO05D000034 1.0e-08 64.3 50 64.0
Sopen11g021060 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 64.3 48 68.8
PGSC0003DMG400034506 Solanum tuberosum HOM05D008531 ORTHO05D010921 1.0e-08 64.3 46 73.9
Sopen08g010370 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-08 63.9 48 68.8
Sopen08g012240 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-08 63.9 48 66.7
Sopen10g013930 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-08 63.9 56 62.5
Sopen05g023720 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.5 49 67.3
PGSC0003DMG400040451 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.8e-08 63.5 60 61.7
Sopen09g023450 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-08 63.2 49 63.3
Sopen01g014810 Solanum pennellii HOM05D000004 ORTHO05D000034 3.0e-08 62.8 49 67.3
PGSC0003DMG400042572 Solanum tuberosum HOM05D013904 ORTHO05D397237 3.0e-08 62.8 60 58.3
Sopen03g016550 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-08 62.4 49 63.3
Sopen06g005500 Solanum pennellii HOM05D000004 ORTHO05D000034 3.9e-08 62.4 52 61.5
Sopen07g018660 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-08 62.4 51 64.7
Sopen09g023610 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-08 61.6 49 63.3
PGSC0003DMG400038132 Solanum tuberosum HOM05D010676 ORTHO05D000034 6.7e-08 61.6 51 62.7
Sopen04g009670 Solanum pennellii HOM05D000004 ORTHO05D000034 8.8e-08 61.2 48 64.6
Sopen05g012120 Solanum pennellii HOM05D000004 ORTHO05D000034 8.8e-08 61.2 49 65.3
Sopen10g008870 Solanum pennellii HOM05D000004 ORTHO05D011078 8.8e-08 61.2 50 64.0
Sopen10g006970 Solanum pennellii HOM05D000004 ORTHO05D000034 1.1e-07 60.8 48 60.4
Sopen11g015820 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-07 60.8 70 52.9
Sopen03g020900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.5 49 63.3
Sopen07g006960 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.5 50 62.0
Sopen07g017710 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-07 60.5 54 59.3
PGSC0003DMG400040933 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.5e-07 60.5 63 57.1
Sopen04g009550 Solanum pennellii HOM05D022806 ORTHO05D030645 2.0e-07 60.1 49 65.3
Sopen03g019500 Solanum pennellii HOM05D000004 ORTHO05D000034 2.6e-07 59.7 49 63.3
Sopen05g011960 Solanum pennellii HOM05D000004 ORTHO05D000034 2.6e-07 59.7 45 66.7
Sopen05g016610 Solanum pennellii HOM05D000004 ORTHO05D000034 2.6e-07 59.7 48 62.5
PGSC0003DMG400036988 Solanum tuberosum HOM05D000303 ORTHO05D000034 2.6e-07 59.7 63 57.1
PGSC0003DMG400045837 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.6e-07 59.7 50 64.0
Sopen07g007080 Solanum pennellii HOM05D000004 ORTHO05D000034 3.3e-07 59.3 58 53.4
Sopen07g018150 Solanum pennellii HOM05D000004 ORTHO05D000034 3.3e-07 59.3 49 59.2
Sopen10g018140 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 59.3 52 59.6
PGSC0003DMG400038108 Solanum tuberosum HOM05D008583 ORTHO05D000034 3.3e-07 59.3 139 36.7
PGSC0003DMG400043643 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.3e-07 59.3 50 60.0
PGSC0003DMG400046065 Solanum tuberosum HOM05D013904 ORTHO05D397004 3.3e-07 59.3 87 46.0
Sopen04g009540 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-07 58.9 49 59.2
Sopen09g023620 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-07 58.9 49 61.2
Sopen12g020340 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-07 58.9 49 61.2
Sopen07g008060 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-07 58.5 50 62.0
Sopen09g019580 Solanum pennellii HOM05D000004 ORTHO05D000034 5.7e-07 58.5 49 65.3
Sopen10g024040 Solanum pennellii HOM05D000004 ORTHO05D000034 5.7e-07 58.5 48 62.5
Sopen02g002130 Solanum pennellii HOM05D000004 ORTHO05D000034 7.4e-07 58.2 45 66.7
Sopen12g012450 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-07 58.2 48 62.5
Sopen01g014480 Solanum pennellii HOM05D000004 ORTHO05D000034 9.7e-07 57.8 49 61.2
Sopen05g024190 Solanum pennellii HOM05D000014 ORTHO05D000093 9.7e-07 57.8 63 54.0
Sopen01g017840 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 57.4 58 55.2
Sopen02g012190 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-06 57.0 51 56.9
Sopen05g024220 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-06 57.0 49 63.3
Sopen09g015320 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-06 57.0 47 63.8
PGSC0003DMG400009609 Solanum tuberosum HOM05D013904 ORTHO05D396882 1.7e-06 57.0 48 60.4
Sopen01g014960 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 56.6 49 59.2
Sopen05g018340 Solanum pennellii HOM05D000004 ORTHO05D000034 2.2e-06 56.6 52 59.6
Sopen08g009820 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 56.6 48 64.6
Sopen11g015650 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 56.6 49 59.2
PGSC0003DMG400037285 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.2e-06 56.6 49 61.2
Sopen03g023850 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 56.2 49 61.2
Sopen04g009570 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 56.2 49 57.1
Sopen04g009610 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 56.2 48 60.4
Sopen07g017070 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 56.2 50 58.0
Sopen09g011270 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 56.2 49 61.2
Sopen09g023410 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 56.2 49 57.1
Sopen11g019090 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 56.2 50 56.0
Sopen11g019770 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-06 56.2 51 58.8
PGSC0003DMG400040608 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.8e-06 56.2 62 51.6
PGSC0003DMG400046436 Solanum tuberosum HOM05D008583 ORTHO05D010950 2.8e-06 56.2 137 39.4
Sopen06g010430 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.8 60 55.0
Sopen08g011930 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.8 49 61.2
Sopen11g019480 Solanum pennellii HOM05D000004 ORTHO05D000034 3.7e-06 55.8 49 63.3
Sopen12g022150 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.8 49 61.2
Sopen03g011200 Solanum pennellii HOM05D000014 ORTHO05D000016 4.8e-06 55.5 45 64.4
Sopen04g009530 Solanum pennellii HOM05D000004 ORTHO05D000034 4.8e-06 55.5 48 58.3
Sopen07g009180 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 55.5 51 58.8
Sopen11g023320 Solanum pennellii HOM05D000004 ORTHO05D000034 4.8e-06 55.5 49 57.1
PGSC0003DMG400044702 Solanum tuberosum HOM05D021948 ORTHO05D000137 4.8e-06 55.5 61 54.1
Sopen01g008950 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.1 52 57.7
Sopen05g011770 Solanum pennellii HOM05D000004 ORTHO05D000034 6.3e-06 55.1 49 59.2
Sopen06g008760 Solanum pennellii HOM05D000004 ORTHO05D000034 6.3e-06 55.1 45 64.4
Sopen11g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.1 49 59.2
Sopen01g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-06 54.7 49 59.2
Sopen08g009060 Solanum pennellii HOM05D000004 ORTHO05D000034 8.2e-06 54.7 49 57.1
PGSC0003DMG400037918 Solanum tuberosum HOM05D013904 ORTHO05D398785 8.2e-06 54.7 48 60.4
PGSC0003DMG400045740 Solanum tuberosum HOM05D000004 ORTHO05D017134 8.2e-06 54.7 47 61.7
PGSC0003DMG400046769 Solanum tuberosum HOM05D013904 ORTHO05D398266 8.2e-06 54.7 47 63.8


User provided reference genes

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