Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 5.8e-269 930.2 452 100.0
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 5.1e-249 864.0 446 93.9
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 3.1e-177 625.5 457 70.9
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.2e-176 623.6 457 70.7
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.5e-160 568.5 471 64.3
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.4e-137 493.8 297 83.2
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-99 367.5 308 63.6
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.1e-39 166.4 271 41.3
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.0e-31 142.1 260 38.1
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 1.6e-24 118.2 187 40.6
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-24 118.2 146 47.3
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 1.0e-23 115.5 146 46.6
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.0e-23 114.0 144 46.5
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 8.7e-23 112.5 163 43.6
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.4e-22 109.4 144 46.5
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.8e-21 107.5 144 39.6
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 6.3e-21 106.3 164 37.8
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.3e-21 106.3 132 45.5
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-20 105.5 164 37.8
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.1e-20 105.5 160 41.9
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-20 105.5 142 45.8
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 1.8e-20 104.8 198 33.8
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-20 104.4 124 47.6
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.1e-20 104.0 136 46.3
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 3.4e-19 100.5 160 36.9
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.0e-18 99.0 134 40.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 1.3e-18 98.6 125 47.2
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.0e-18 96.7 102 52.9
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.0e-18 96.7 111 48.6
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.0e-18 96.7 133 38.3
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.5e-18 96.3 161 34.2
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 6.5e-18 96.3 135 40.7
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.5e-18 96.3 181 35.4
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.5e-18 95.9 164 36.0
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 7.2e-17 92.8 144 35.4
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.4e-17 92.4 122 45.1
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-16 91.7 120 43.3
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 2.1e-16 91.3 143 35.7
PGSC0003DMG400007039 Solanum tuberosum HOM05D018142 ORTHO05D010544 2.1e-16 91.3 70 64.3
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.4e-15 88.6 142 39.4
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.8e-15 88.2 163 31.9
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.8e-15 85.9 134 35.1
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 1.5e-14 85.1 161 29.8
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 3.3e-14 84.0 135 34.8
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.3e-14 84.0 125 38.4
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 3.7e-13 80.5 148 33.8
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 8.2e-13 79.3 132 35.6
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 5.3e-12 76.6 112 45.5
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 6.9e-12 76.3 172 29.7
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.1e-12 75.9 83 51.8
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 2.0e-11 74.7 132 30.3
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.8e-10 70.5 137 29.2
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 5.5e-09 66.6 129 30.2
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 5.5e-09 66.6 118 33.9
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 7.2e-09 66.2 126 30.2
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 1.2e-08 65.5 110 36.4
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.6e-08 63.9 115 33.9
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.1e-08 63.2 88 43.2
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.8e-07 61.6 116 31.9
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 3.0e-07 60.8 73 39.7
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 3.9e-07 60.5 132 31.8
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.9e-07 60.5 73 46.6
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.7e-07 59.7 98 36.7
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 2.0e-06 58.2 87 36.8
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 2.6e-06 57.8 165 26.7
Haze_08778 Corylus avellana HOM05D001713 ORTHO05D001669 4.4e-06 57.0 125 31.2
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.4e-06 56.2 56 48.2


User provided reference genes

Program Settings