Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400042038 Solanum tuberosum HOM05D000222 ORTHO05D004962 4.5e-80 301.2 153 100.0
PGSC0003DMG400002391 Solanum tuberosum HOM05D000222 ORTHO05D004962 7.4e-75 283.9 152 94.7
PGSC0003DMG400022774 Solanum tuberosum HOM05D000222 ORTHO05D004962 3.7e-58 228.4 188 68.1
Sopen01g001160 Solanum pennellii HOM05D000222 ORTHO05D004962 4.5e-56 221.5 186 67.7
PGSC0003DMG400022773 Solanum tuberosum HOM05D000222 ORTHO05D004962 6.1e-53 211.1 188 64.4
Nitab4.5_0003878g0010 Nicotiana tabacum HOM05D000222 ORTHO05D004962 1.2e-27 127.1 143 54.5
Nitab4.5_0013820g0010 Nicotiana tabacum HOM05D000222 ORTHO05D004962 1.5e-27 126.7 142 54.9
Dinv14377 Davidia involucrata HOM05D000222 ORTHO05D004962 2.0e-27 126.3 137 54.0
Peaxi162Scf00937g00112 Petunia axillaris HOM05D000222 ORTHO05D004962 4.4e-27 125.2 109 66.1
Prupe.1G336600 Prunus persica HOM05D000222 ORTHO05D004962 9.8e-27 124.0 136 54.4
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 1.7e-26 123.2 132 56.8
Actinidia38426 Actinidia chinensis HOM05D000222 ORTHO05D004962 2.2e-26 122.9 137 52.6
CSS0002438 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D004962 2.9e-26 122.5 137 51.1
Hma1.2p1_0037F.1_g023820 Hydrangea macrophylla HOM05D000222 ORTHO05D004962 8.3e-26 120.9 142 52.8
Thecc.02G305400 Theobroma cacao HOM05D000222 ORTHO05D004962 8.3e-26 120.9 132 53.8
COL.COLO4_27597 Corchorus olitorius HOM05D000222 ORTHO05D004962 1.4e-25 120.2 126 57.1
Cc11_g05940 Coffea canephora HOM05D000222 ORTHO05D004962 3.2e-25 119.0 113 61.1
Hma1.2p1_1450F.1_g284240 Hydrangea macrophylla HOM05D000222 ORTHO05D004962 7.0e-25 117.9 139 54.7
Gohir.D13G027800 Gossypium hirsutum HOM05D000222 ORTHO05D004962 1.6e-24 116.7 118 55.9
Gorai.013G031700 Gossypium raimondii HOM05D000222 ORTHO05D004962 1.6e-24 116.7 118 55.9
Gohir.A13G029500 Gossypium hirsutum HOM05D000222 ORTHO05D004962 3.5e-24 115.5 144 50.7
Oeu054230.1 Olea europaea HOM05D000222 ORTHO05D004962 6.0e-24 114.8 132 51.5
DCAR_023547 Daucus carota HOM05D000222 ORTHO05D004962 7.8e-24 114.4 135 48.1
Dinv05676 Davidia involucrata HOM05D000222 ORTHO05D004962 7.8e-24 114.4 107 60.7
Duzib248G1586 Durio zibethinus HOM05D000222 ORTHO05D004962 1.0e-23 114.0 142 50.0
Manes.17G086800 Manihot esculenta HOM05D000222 ORTHO05D004962 1.0e-23 114.0 129 50.4
FAN12G2155 Fragaria x ananassa HOM05D000222 ORTHO05D004962 1.3e-23 113.6 132 53.8
FAN22G0304 Fragaria x ananassa HOM05D000222 ORTHO05D004962 1.3e-23 113.6 132 53.8
RcHm_v2.0_Chr4g0442161 Rosa chinensis HOM05D000222 ORTHO05D004962 1.3e-23 113.6 126 56.3
Atru.chr11.750 Acer truncatum HOM05D000222 ORTHO05D004962 1.7e-23 113.2 109 56.0
Ciclev10014296m.g Citrus clementina HOM05D000222 ORTHO05D004962 2.3e-23 112.8 109 56.0
Lj6A732T72 Lonicera japonica HOM05D000222 ORTHO05D004962 2.3e-23 112.8 108 62.0
FvH4_4g33110 Fragaria vesca HOM05D000222 ORTHO05D004962 8.6e-23 110.9 132 53.8
FAN07G1810 Fragaria x ananassa HOM05D000222 ORTHO05D004962 1.1e-22 110.5 132 53.0
FAN17G0744 Fragaria x ananassa HOM05D000222 ORTHO05D004962 1.5e-22 110.2 132 53.0
Potri.010G102600 Populus trichocarpa HOM05D000222 ORTHO05D004962 1.5e-22 110.2 126 52.4
Cpa.g.sc2.140 Carica papaya HOM05D000222 ORTHO05D004962 1.9e-22 109.8 132 50.0
Duzib251G0369 Durio zibethinus HOM05D000222 ORTHO05D004962 1.9e-22 109.8 132 51.5
DCAR_030303 Daucus carota HOM05D000222 ORTHO05D004962 2.5e-22 109.4 108 54.6
Rhsim09G0086600 Rhododendron simsii HOM05D000222 ORTHO05D004962 4.3e-22 108.6 110 56.4
Actinidia12434 Actinidia chinensis HOM05D000222 ORTHO05D004962 5.6e-22 108.2 137 48.2
MD13G1016800 Malus domestica HOM05D000222 ORTHO05D004962 5.6e-22 108.2 145 49.0
Sabra10G0075300 Salix brachista HOM05D000222 ORTHO05D004962 7.3e-22 107.8 126 51.6
Glyma.05G138900 Glycine max HOM05D000222 ORTHO05D004962 2.8e-21 105.9 109 54.1
Manes.15G137700 Manihot esculenta HOM05D000222 ORTHO05D004962 4.7e-21 105.1 110 55.5
CAN.G647.5 Capsicum annuum HOM05D000222 ORTHO05D004962 6.2e-21 104.8 110 56.4
Potri.008G138100 Populus trichocarpa HOM05D000222 ORTHO05D004962 6.2e-21 104.8 125 51.2
Phvul.002G182200 Phaseolus vulgaris HOM05D000222 ORTHO05D004962 1.1e-20 104.0 109 53.2
Sabra08G0105200 Salix brachista HOM05D000222 ORTHO05D004962 1.1e-20 104.0 125 50.4
Actinidia20114 Actinidia chinensis HOM05D000222 ORTHO05D004962 1.4e-20 103.6 128 48.4
Lalb_Chr12g0209391 Lupinus albus HOM05D000222 ORTHO05D004962 1.4e-20 103.6 109 51.4
VMungo0251G0007 Vigna mungo HOM05D000222 ORTHO05D004962 1.4e-20 103.6 109 52.3
MD16G1014700 Malus domestica HOM05D000222 ORTHO05D004962 2.3e-20 102.8 145 48.3
TAR374G0583 Trochodendron aralioides HOM05D000222 ORTHO05D004962 2.3e-20 102.8 137 46.7
Lj4g0012229 Lotus japonicus HOM05D000222 ORTHO05D004962 6.8e-20 101.3 142 45.1
Nn4g24491 Nelumbo nucifera HOM05D000222 ORTHO05D004962 6.8e-20 101.3 143 46.9
arahy.Tifrunner.gnm1.ann1.EPT9JX Arachis hypogaea HOM05D000222 ORTHO05D004962 8.9e-20 100.9 110 50.9
arahy.Tifrunner.gnm1.ann1.J9EPM7 Arachis hypogaea HOM05D000222 ORTHO05D004962 8.9e-20 100.9 110 50.9
CiPaw.05G188400 Carya illinoinensis HOM05D000222 ORTHO05D004962 1.5e-19 100.1 146 45.2
Eucgr.B02662 Eucalyptus grandis HOM05D000222 ORTHO05D004962 9.8e-19 97.4 142 47.2
Lalb_Chr07g0187811 Lupinus albus HOM05D000222 ORTHO05D004962 1.3e-18 97.1 109 49.5
Glyma.08G094100 Glycine max HOM05D000222 ORTHO05D004962 1.7e-18 96.7 104 52.9
PSO063G5028 Papaver somniferum HOM05D000222 ORTHO05D004962 2.2e-18 96.3 109 49.5
PSO782G4980 Papaver somniferum HOM05D000222 ORTHO05D004962 2.2e-18 96.3 109 49.5
Cfa015061 Carpinus fangiana HOM05D000222 ORTHO05D004962 2.9e-18 95.9 146 43.8
TWI74G1486 Tripterygium wilfordii HOM05D000222 ORTHO05D004962 3.7e-18 95.5 126 47.6
Aqoxy3G04105 Aquilegia oxysepala HOM05D000222 ORTHO05D004962 4.9e-18 95.1 110 51.8
MSTRG.13646 Avicennia marina HOM05D000222 ORTHO05D004962 6.4e-18 94.7 142 44.4
MSTRG.2110 Avicennia marina HOM05D000222 ORTHO05D004962 6.4e-18 94.7 141 45.4
ECA246G4790 Erigeron canadensis HOM05D000222 ORTHO05D004962 6.4e-18 94.7 103 51.5
CAN.G74.43 Capsicum annuum HOM05D000222 ORTHO05D004962 8.3e-18 94.4 135 46.7
VMungo1215G2627 Vigna mungo HOM05D000222 ORTHO05D004962 8.3e-18 94.4 110 50.0
Haze_10830 Corylus avellana HOM05D000222 ORTHO05D004962 1.1e-17 94.0 146 43.8
Phvul.003G014700 Phaseolus vulgaris HOM05D000222 ORTHO05D004962 1.9e-17 93.2 110 50.9
TPR.G5124 Trifolium pratense HOM05D000222 ORTHO05D004962 2.4e-17 92.8 108 49.1
Lj3A861T64 Lonicera japonica HOM05D000222 ORTHO05D004962 3.2e-17 92.4 173 40.5
Sc14g0006780 Simmondsia chinensis HOM05D000222 ORTHO05D004962 4.1e-17 92.0 144 41.0
Migut.E00527 Erythranthe guttata HOM05D000222 ORTHO05D004962 2.1e-16 89.7 142 43.7
Lsat_1_v5_gn_2_36420 Lactuca sativa HOM05D000222 ORTHO05D004962 2.7e-16 89.4 160 40.6
Psat7g083280 Pisum sativum HOM05D000222 ORTHO05D004962 2.7e-16 89.4 109 47.7
QL03p038766 Quercus lobata HOM05D000222 ORTHO05D004962 2.7e-16 89.4 123 47.2
Ca_11582_v3 Cicer arietinum L. HOM05D000222 ORTHO05D004962 3.5e-16 89.0 143 41.3
HanXRQChr15g0471771 Helianthus annuus HOM05D000222 ORTHO05D004962 2.3e-15 86.3 87 54.0
Glyma.20G012600 Glycine max HOM05D000222 ORTHO05D004962 3.0e-15 85.9 106 49.1
Sc14g0006790 Simmondsia chinensis HOM05D000222 ORTHO05D004962 3.0e-15 85.9 144 38.9
MELO3C005247.2 Cucumis melo HOM05D000222 ORTHO05D004962 3.9e-15 85.5 106 48.1
Sopen04g003340 Solanum pennellii HOM05D000222 ORTHO05D004962 3.9e-15 85.5 108 49.1
CiPaw.06G056800 Carya illinoinensis HOM05D000222 ORTHO05D004962 5.1e-15 85.1 146 38.4
ClCG01G006740 Citrullus lanatus HOM05D000222 ORTHO05D004962 5.1e-15 85.1 106 48.1
MBI19_g10908_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D004962 5.1e-15 85.1 113 47.8
Lalb_Chr13g0293651 Lupinus albus HOM05D000222 ORTHO05D004962 8.6e-15 84.3 113 42.5
CANSAT78G2041 Cannabis sativa HOM05D000222 ORTHO05D004962 1.1e-14 84.0 102 49.0
TAR622G0644 Trochodendron aralioides HOM05D000222 ORTHO05D004962 1.5e-14 83.6 140 38.6
Glyma.07G174100 Glycine max HOM05D000222 ORTHO05D004962 1.9e-14 83.2 106 49.1
CsaV3_5G027810 Cucumis sativus L. HOM05D000222 ORTHO05D004962 5.6e-14 81.6 142 40.1
Sed0000815 Sechium edule HOM05D000222 ORTHO05D004962 1.2e-13 80.5 106 48.1
Lj2g0002621 Lotus japonicus HOM05D000222 ORTHO05D004962 1.6e-13 80.1 108 48.1
PGSC0003DMG400027429 Solanum tuberosum HOM05D000222 ORTHO05D004962 3.6e-13 79.0 133 45.1
Peaxi162Scf00337g00413 Petunia axillaris HOM05D000222 ORTHO05D004962 4.7e-13 78.6 136 43.4
Solyc05g018500.3 Solanum lycopersicum HOM05D000222 ORTHO05D004962 4.7e-13 78.6 133 45.1
Sopen05g015580 Solanum pennellii HOM05D000222 ORTHO05D004962 4.7e-13 78.6 133 45.1
EL10Ac6g14203 Beta vulgaris HOM05D000222 ORTHO05D004962 6.2e-13 78.2 126 38.9
PGSC0003DMG400029488 Solanum tuberosum HOM05D000222 ORTHO05D004962 8.1e-13 77.8 109 46.8
Sopen04g003510 Solanum pennellii HOM05D000222 ORTHO05D004962 2.3e-12 76.3 109 45.9
Sed0022559 Sechium edule HOM05D000222 ORTHO05D004962 3.1e-12 75.9 106 46.2
PGSC0003DMG400029502 Solanum tuberosum HOM05D000222 ORTHO05D004962 5.2e-12 75.1 108 44.4
SGA_v2.0_scaffold65G22111 Striga asiatica HOM05D000222 ORTHO05D004962 1.5e-11 73.6 142 40.8
HanXRQChr12g0380691 Helianthus annuus HOM05D000222 ORTHO05D004962 7.6e-11 71.2 88 47.7
AUR62024692 Chenopodium quinoa HOM05D000222 ORTHO05D004962 9.9e-11 70.9 126 38.9
THA.LOC104805095 Tarenaya hassleriana HOM05D000222 ORTHO05D004962 9.9e-11 70.9 131 36.6
AUR62011848 Chenopodium quinoa HOM05D000222 ORTHO05D004962 1.7e-10 70.1 109 40.4
AUR62024691 Chenopodium quinoa HOM05D000222 ORTHO05D004962 2.9e-10 69.3 132 36.4
Sp1g13180 Schrenkiella parvula HOM05D000222 ORTHO05D004962 1.9e-09 66.6 112 39.3
AT1G14740 Arabidopsis thaliana HOM05D000222 ORTHO05D004962 2.4e-09 66.2 107 41.1
Carub.0001s1452 Capsella rubella HOM05D000222 ORTHO05D004962 2.4e-09 66.2 107 41.1
AL1G26750 Arabidopsis lyrata HOM05D000222 ORTHO05D004962 3.2e-09 65.9 107 41.1
unitig_52.g17291 Utricularia gibba HOM05D000222 ORTHO05D004962 4.1e-09 65.5 105 39.0
BcaB02g06545 Brassica carinata HOM05D000222 ORTHO05D004962 5.4e-09 65.1 107 41.1
Thhalv10006891m.g Eutrema salsugineum HOM05D000222 ORTHO05D004962 7.1e-09 64.7 107 38.3
BcaC05g25393 Brassica carinata HOM05D000222 ORTHO05D004962 9.2e-09 64.3 108 44.4
A06p10790 Brassica napus HOM05D000222 ORTHO05D004962 9.2e-09 64.3 107 41.1
C05p12690 Brassica napus HOM05D000222 ORTHO05D004962 9.2e-09 64.3 108 44.4
BolC5t30012H Brassica oleracea HOM05D000222 ORTHO05D004962 9.2e-09 64.3 108 44.4
BraA06t24257Z Brassica rapa HOM05D000222 ORTHO05D004962 9.2e-09 64.3 107 41.1
Hund22722 Selenicereus undatus HOM05D000222 ORTHO05D004962 9.2e-09 64.3 139 34.5
CDE05G0510 Ceratophyllum demersum HOM05D000222 ORTHO05D004962 6.0e-08 61.6 109 39.4
ECA234G2546 Erigeron canadensis HOM05D000222 ORTHO05D004962 6.0e-08 61.6 137 37.2
HPP92_004255 Vanilla planifolia HOM05D000222 ORTHO05D004962 6.0e-08 61.6 66 51.5
CAN.G282.107 Capsicum annuum HOM05D000222 ORTHO05D004962 8.6e-07 57.8 41 73.2
BcaC07g38759 Brassica carinata HOM05D000222 ORTHO05D004962 1.1e-06 57.4 107 38.3
C08p16900 Brassica napus HOM05D000222 ORTHO05D004962 1.1e-06 57.4 107 38.3
BolC8t49317H Brassica oleracea HOM05D000222 ORTHO05D004962 1.1e-06 57.4 107 38.3
ATR0598G336 Amborella trichopoda HOM05D000222 ORTHO05D004962 1.5e-06 57.0 115 33.0
BcaB03g13083 Brassica carinata HOM05D000222 ORTHO05D004962 2.5e-06 56.2 108 36.1
Zm00001eb010160 Zea mays HOM05D000222 ORTHO05D004962 9.6e-06 54.3 144 30.6


User provided reference genes

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