Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-133 479.9 229 100.0
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.2e-62 243.0 167 63.5
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.8e-61 240.0 167 64.1
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.0e-61 238.0 167 62.9
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.5e-60 235.7 161 64.0
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-53 214.2 163 60.1
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 3.5e-52 209.1 166 56.0
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 5.0e-51 205.3 169 54.4
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.2e-50 201.4 160 56.9
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 2.1e-49 199.9 161 50.3
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 8.0e-49 198.0 168 51.2
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.2e-48 195.3 191 48.2
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 6.8e-48 194.9 162 53.1
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.8e-48 194.9 167 51.5
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-47 194.1 166 51.2
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 2.0e-47 193.4 161 52.8
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 2.6e-47 193.0 161 53.4
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 3.4e-47 192.6 161 52.2
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 5.7e-47 191.8 177 49.7
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.7e-47 191.8 163 50.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 7.5e-47 191.4 155 54.2
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.5e-47 191.4 161 52.2
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 9.8e-47 191.0 163 54.0
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-46 190.7 161 50.9
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-46 190.7 161 54.0
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.8e-46 189.5 168 50.6
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.3e-46 188.3 161 52.2
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.3e-42 175.6 164 50.0
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 5.2e-40 168.7 175 45.7
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.6e-39 166.4 140 53.6
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 5.8e-39 165.2 132 53.0
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 2.2e-38 163.3 164 47.0
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.3e-38 161.4 130 55.4
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.6e-36 157.1 162 46.3
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.7e-35 153.7 117 56.4
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.5e-34 150.6 125 52.8
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.9e-34 150.2 152 48.7
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.5e-34 149.8 169 38.5
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.4e-30 135.2 103 55.3
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.3e-30 134.8 131 46.6
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.6e-28 130.6 132 41.7
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 3.0e-27 126.3 165 35.2
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 6.6e-27 125.2 165 37.6
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 9.5e-26 121.3 167 34.7
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.0e-24 115.9 151 38.4
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.6e-23 113.2 119 44.5
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.3e-22 110.9 142 39.4
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-22 110.9 117 47.0
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.7e-22 110.5 151 38.4
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 6.4e-22 108.6 162 36.4
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.9e-21 107.1 151 38.4
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.1e-20 103.6 121 41.3
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.7e-20 103.2 125 44.0
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.5e-18 96.7 134 38.8
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 7.3e-18 95.1 161 31.7
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-17 94.4 119 42.9
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 3.6e-17 92.8 74 54.1
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 8.1e-17 91.7 70 51.4
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 1.1e-16 91.3 156 32.7
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.8e-16 90.5 170 32.4
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.0e-15 87.0 117 41.9
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.6e-15 86.7 179 30.2
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-15 85.9 198 30.8
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 5.8e-15 85.5 197 26.9
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 7.6e-15 85.1 134 35.1
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.9e-14 83.2 134 34.3
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.2e-13 79.3 62 58.1
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.2e-12 77.8 126 34.9
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 1.2e-12 77.8 88 40.9
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 1.5e-10 70.9 128 33.6
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 9.6e-10 68.2 153 29.4
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.8e-09 65.9 84 36.9
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 3.1e-08 63.2 155 25.8
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.0e-07 60.5 66 43.9
PGSC0003DMG400036095 Solanum tuberosum HOM05D000004 ORTHO05D000002 5.8e-07 58.9 56 58.9
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 6.4e-06 55.5 161 28.0


User provided reference genes

Program Settings