Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400041568 Solanum tuberosum HOM05D000158 ORTHO05D000197 3.0e-196 688.3 346 100.0
PGSC0003DMG400046308 Solanum tuberosum HOM05D000158 ORTHO05D003614 1.9e-65 253.8 196 63.8
PGSC0003DMG400014583 Solanum tuberosum HOM05D000158 ORTHO05D000197 2.7e-64 250.0 308 48.4
Sopen12g001100 Solanum pennellii HOM05D000158 ORTHO05D000197 3.5e-64 249.6 310 46.8
PGSC0003DMG400001860 Solanum tuberosum HOM05D000158 ORTHO05D000197 3.4e-51 206.5 125 80.8
PGSC0003DMG400031431 Solanum tuberosum HOM05D000158 ORTHO05D000197 1.3e-47 194.5 135 72.6
Sopen01g020000 Solanum pennellii HOM05D000158 ORTHO05D000197 6.4e-42 175.6 127 65.4
Sopen01g016730 Solanum pennellii HOM05D000158 ORTHO05D000197 1.8e-36 157.5 228 41.2
Sopen01g014030 Solanum pennellii HOM05D000158 ORTHO05D000197 7.6e-35 152.1 228 40.8
Sopen04g015620 Solanum pennellii HOM05D000158 ORTHO05D002858 1.7e-34 151.0 228 40.4
Sopen06g008750 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-34 149.4 228 39.9
PGSC0003DMG400029041 Solanum tuberosum HOM05D000158 ORTHO05D000197 1.4e-33 147.9 115 67.8
Sopen01g030040 Solanum pennellii HOM05D000158 ORTHO05D000197 3.2e-33 146.7 176 44.3
Sopen11g016230 Solanum pennellii HOM05D000158 ORTHO05D000197 1.5e-30 137.9 205 42.0
Sopen02g001730 Solanum pennellii HOM05D000158 ORTHO05D000197 1.4e-25 121.3 190 42.6
Sopen03g014160 Solanum pennellii HOM05D000004 ORTHO05D000197 2.7e-24 117.1 145 42.1
Sopen09g015120 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-23 113.6 228 29.4
Sopen03g016650 Solanum pennellii HOM05D000158 ORTHO05D000197 1.2e-19 101.7 162 39.5
Sopen06g007050 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-19 101.7 133 45.1
Sopen09g015100 Solanum pennellii HOM05D000158 ORTHO05D000197 1.9e-17 94.4 114 46.5
Sopen12g009660 Solanum pennellii HOM05D000158 ORTHO05D000197 1.6e-16 91.3 149 38.3
Sopen06g012420 Solanum pennellii HOM05D000158 ORTHO05D000197 6.1e-16 89.4 102 43.1
Sopen09g015640 Solanum pennellii HOM05D000158 ORTHO05D000197 1.0e-15 88.6 157 39.5
PGSC0003DMG400019381 Solanum tuberosum HOM05D000158 ORTHO05D000197 3.0e-15 87.0 144 37.5
Sopen02g001740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-14 85.1 146 41.1
Sopen09g015630 Solanum pennellii HOM05D000158 ORTHO05D002858 2.0e-14 84.3 79 54.4
PGSC0003DMG400041437 Solanum tuberosum HOM05D010819 ORTHO05D010408 3.3e-14 83.6 54 77.8
Sopen10g026700 Solanum pennellii HOM05D000158 ORTHO05D000197 7.4e-14 82.4 102 42.2
PGSC0003DMG400041123 Solanum tuberosum HOM05D010819 ORTHO05D010408 1.7e-13 81.3 109 48.6
PGSC0003DMG400036273 Solanum tuberosum HOM05D010819 ORTHO05D010408 4.1e-12 76.6 49 73.5
PGSC0003DMG400036915 Solanum tuberosum HOM05D000158 ORTHO05D000197 5.3e-12 76.3 36 88.9
PGSC0003DMG400039342 Solanum tuberosum HOM05D010819 ORTHO05D010408 7.7e-11 72.4 49 67.3
PGSC0003DMG400031385 Solanum tuberosum HOM05D000351 ORTHO05D000250 1.0e-10 72.0 50 70.0
PGSC0003DMG400038497 Solanum tuberosum HOM05D000158 ORTHO05D010408 2.9e-10 70.5 47 70.2
PGSC0003DMG400022758 Solanum tuberosum HOM05D000158 ORTHO05D010408 5.0e-10 69.7 50 66.0
PGSC0003DMG400034799 Solanum tuberosum HOM05D000158 ORTHO05D010408 5.0e-10 69.7 50 66.0
TPR.G25318 Trifolium pratense HOM05D000158 ORTHO05D003614 6.5e-10 69.3 203 26.6
PGSC0003DMG400045112 Solanum tuberosum HOM05D000158 ORTHO05D000197 1.4e-09 68.2 34 79.4
arahy.Tifrunner.gnm1.ann1.PDU7VZ Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-09 67.0 228 25.4
PGSC0003DMG400042426 Solanum tuberosum HOM05D000158 ORTHO05D011832 3.2e-09 67.0 36 77.8
PGSC0003DMG400040289 Solanum tuberosum HOM05D010819 ORTHO05D010408 5.5e-09 66.2 34 79.4
PGSC0003DMG400036524 Solanum tuberosum HOM05D000158 ORTHO05D010408 1.6e-08 64.7 34 73.5
TPR.G28228 Trifolium pratense HOM05D000158 ORTHO05D000197 2.7e-08 63.9 166 27.7
Solyc00g500003.1 Solanum lycopersicum HOM05D000158 ORTHO05D000197 3.6e-08 63.5 113 42.5
Manes.09G089621 Manihot esculenta HOM05D000158 ORTHO05D000002 1.0e-07 62.0 77 42.9
PGSC0003DMG400040799 Solanum tuberosum HOM05D000158 ORTHO05D010408 1.8e-07 61.2 39 74.4
TPR.G8016 Trifolium pratense HOM05D000158 ORTHO05D000197 3.9e-07 60.1 158 27.8
TPR.G20471 Trifolium pratense HOM05D000004 ORTHO05D000002 6.7e-07 59.3 98 37.8
Sopen09g009750 Solanum pennellii HOM05D010819 ORTHO05D010408 8.8e-07 58.9 75 46.7
Sopen12g027710 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 58.5 63 42.9
Sopen09g009730 Solanum pennellii HOM05D010819 ORTHO05D010408 1.5e-06 58.2 85 38.8
CiPaw.03G092700 Carya illinoinensis HOM05D000158 ORTHO05D002858 2.6e-06 57.4 194 24.2
Thhalv10023798m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 2.6e-06 57.4 186 26.9
Manes.17G045701 Manihot esculenta HOM05D000158 ORTHO05D000197 2.6e-06 57.4 32 65.6
Hund15556 Selenicereus undatus HOM05D000158 ORTHO05D009844 3.3e-06 57.0 197 22.8
Sopen06g013940 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-06 57.0 43 55.8
Glyma.14G141100 Glycine max HOM05D000158 ORTHO05D000197 4.4e-06 56.6 168 24.4
Manes.17G011766 Manihot esculenta HOM05D000158 ORTHO05D000197 5.7e-06 56.2 86 39.5
Atru.chr4.1438 Acer truncatum HOM05D000158 ORTHO05D000197 9.7e-06 55.5 86 38.4


User provided reference genes

Program Settings