Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 9.4e-68 260.0 125 100.0
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 2.9e-24 115.5 129 49.6
Sopen06g032370 Solanum pennellii HOM05D017346 ORTHO05D011266 3.9e-21 105.1 81 59.3
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 9.8e-17 90.5 125 42.4
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 6.4e-16 87.8 131 39.7
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 8.3e-16 87.4 123 39.0
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 1.1e-15 87.0 123 38.2
Sopen06g032270 Solanum pennellii HOM05D017346 ORTHO05D024760 1.1e-15 87.0 130 37.7
Solyc06g075840.1 Solanum lycopersicum HOM05D017346 ORTHO05D024760 1.4e-15 86.7 130 39.2
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 1.3e-13 80.1 115 40.0
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.5e-12 76.6 106 38.7
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.5e-12 76.6 134 35.8
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 7.3e-12 74.3 134 35.1
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 1.2e-11 73.6 126 38.1
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.8e-11 72.4 83 44.6
CAN.G394.42 Capsicum annuum HOM05D017346 ORTHO05D024760 3.6e-11 72.0 133 30.8
PGSC0003DMG400040747 Solanum tuberosum HOM05D012723 ORTHO05D011266 3.6e-11 72.0 126 37.3
PGSC0003DMG400045401 Solanum tuberosum HOM05D008565 ORTHO05D017126 3.6e-11 72.0 118 34.7
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 4.7e-11 71.6 91 42.9
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 1.4e-10 70.1 105 37.1
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 8.9e-10 67.4 116 37.9
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 1.2e-09 67.0 123 37.4
Solyc06g075890.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 1.5e-09 66.6 132 31.1
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.5e-09 66.6 101 35.6
Solyc06g075700.2 Solanum lycopersicum HOM05D012723 ORTHO05D011266 2.6e-09 65.9 125 31.2
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 2.6e-09 65.9 129 34.9
Sopen06g032100 Solanum pennellii HOM05D012723 ORTHO05D011266 2.6e-09 65.9 125 31.2
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 2.6e-09 65.9 121 30.6
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 3.4e-09 65.5 101 36.6
Solyc06g075860.3 Solanum lycopersicum HOM05D008565 ORTHO05D011266 5.8e-09 64.7 80 45.0
Solyc06g075900.1 Solanum lycopersicum HOM05D035698 ORTHO05D011266 7.5e-09 64.3 130 34.6
Solyc06g075430.3 Solanum lycopersicum HOM05D039704 ORTHO05D024760 9.9e-09 63.9 136 28.7
Sopen06g032300 Solanum pennellii HOM05D035698 ORTHO05D011266 9.9e-09 63.9 130 33.8
PGSC0003DMG400045349 Solanum tuberosum HOM05D008565 ORTHO05D011266 9.9e-09 63.9 123 36.6
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.7e-08 63.2 152 32.2
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 2.2e-08 62.8 99 36.4
Migut.D02120 Erythranthe guttata HOM05D000553 ORTHO05D011290 1.9e-07 59.7 79 43.0
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 7.1e-07 57.8 116 33.6
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 9.2e-07 57.4 106 34.0
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 1.2e-06 57.0 130 33.8
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 1.2e-06 57.0 130 33.8
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 2.1e-06 56.2 124 33.1
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 2.7e-06 55.8 92 39.1
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 2.7e-06 55.8 124 33.1
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 3.5e-06 55.5 91 35.2
CiPaw.14G071500 Carya illinoinensis HOM05D010595 ORTHO05D011290 4.6e-06 55.1 87 33.3
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 4.6e-06 55.1 82 37.8
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 4.6e-06 55.1 86 37.2
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 6.0e-06 54.7 96 30.2
TAR623G0400 Trochodendron aralioides HOM05D000553 ORTHO05D000460 6.0e-06 54.7 118 30.5
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 7.8e-06 54.3 59 44.1


User provided reference genes

Program Settings