Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040698 Solanum tuberosum HOM05D002441 ORTHO05D002376 8.5e-82 307.0 159 100.0
PGSC0003DMG400010868 Solanum tuberosum HOM05D002441 ORTHO05D002376 2.8e-69 265.4 176 82.4
PGSC0003DMG400010936 Solanum tuberosum HOM05D002441 ORTHO05D002376 4.4e-54 214.9 146 78.8
Nitab4.5_0003378g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.4e-29 131.3 195 42.6
CAN.G125.10 Capsicum annuum HOM05D000010 ORTHO05D002376 2.1e-27 126.3 153 47.1
CAN.G411.8 Capsicum annuum HOM05D002441 ORTHO05D002376 2.7e-27 125.9 90 60.0
CAN.G651.11 Capsicum annuum HOM05D002441 ORTHO05D002376 3.0e-26 122.5 90 57.8
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.9e-26 122.1 196 39.8
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.6e-26 120.9 196 39.8
CAN.G206.110 Capsicum annuum HOM05D002441 ORTHO05D002376 1.5e-25 120.2 90 58.9
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 2.5e-25 119.4 93 60.2
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 2.1e-24 116.3 89 57.3
CAN.G426.17 Capsicum annuum HOM05D002441 ORTHO05D002376 2.1e-24 116.3 90 57.8
Nitab4.5_0004100g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.8e-24 115.9 100 56.0
Nitab4.5_0005910g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.2e-24 114.8 98 55.1
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.1e-24 114.4 190 38.9
Nitab4.5_0000448g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.8e-23 113.2 100 54.0
CAN.G1139.20 Capsicum annuum HOM05D002441 ORTHO05D002376 3.1e-23 112.5 145 43.4
Nitab4.5_0003964g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.4e-22 108.6 100 52.0
CAN.G1181.26 Capsicum annuum HOM05D002441 ORTHO05D002376 7.6e-22 107.8 156 42.3
PGSC0003DMG401018748 Solanum tuberosum HOM05D002441 ORTHO05D002376 2.9e-21 105.9 125 52.0
Nitab4.5_0002025g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.4e-21 104.8 97 52.6
Nitab4.5_0007294g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.6e-19 100.1 88 53.4
Nitab4.5_0002391g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-18 96.7 89 50.6
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-18 96.7 88 52.3
Nitab4.5_0000167g0330 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.6e-18 94.7 101 45.5
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 8.7e-18 94.4 156 36.5
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-17 94.0 171 36.8
Nitab4.5_0001818g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.3e-17 92.0 167 36.5
Nitab4.5_0005864g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.6e-17 90.9 171 36.8
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 9.6e-17 90.9 165 33.3
Peaxi162Scf00706g00120 Petunia axillaris HOM05D002441 ORTHO05D002376 1.3e-16 90.5 165 33.9
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 1.6e-16 90.1 165 33.9
Nitab4.5_0001070g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.6e-16 89.0 86 51.2
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 4.8e-16 88.6 156 37.8
Nitab4.5_0003355g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.2e-16 88.2 184 38.0
Nitab4.5_0026131g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.2e-16 88.2 105 41.9
Peaxi162Scf00103g00815 Petunia axillaris HOM05D002441 ORTHO05D002376 1.4e-15 87.0 165 33.9
Peaxi162Scf00261g00059 Petunia axillaris HOM05D002441 ORTHO05D002376 1.4e-15 87.0 165 31.5
Peaxi162Scf00602g00313 Petunia axillaris HOM05D002441 ORTHO05D002376 1.8e-15 86.7 166 33.1
CAN.G1212.9 Capsicum annuum HOM05D002441 ORTHO05D002376 3.1e-15 85.9 168 32.7
Nitab4.5_0004197g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.1e-15 85.9 105 41.9
Nitab4.5_0000928g0130 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.2e-14 84.0 88 45.5
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-14 84.0 69 56.5
Nitab4.5_0002544g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.5e-14 83.6 97 42.3
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 2.6e-14 82.8 174 29.9
Nitab4.5_0003263g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.4e-14 82.4 161 36.0
Nitab4.5_0009530g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.4e-14 82.4 88 46.6
Nitab4.5_0015899g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.4e-14 82.0 96 40.6
Nitab4.5_0011018g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.8e-14 81.6 157 35.7
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.3e-13 80.5 166 32.5
Nitab4.5_0002907g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-13 79.7 100 41.0
Nitab4.5_0001878g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.4e-13 78.2 90 44.4
CAN.G1537.11 Capsicum annuum HOM05D002441 ORTHO05D002376 8.4e-13 77.8 171 31.0
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-12 77.4 166 30.7
CAN.G849.8 Capsicum annuum HOM05D002441 ORTHO05D002376 1.9e-12 76.6 159 31.4
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 5.4e-12 75.1 150 32.0
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 7.1e-12 74.7 173 34.1
Nitab4.5_0000365g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.1e-12 74.7 157 35.7
Nitab4.5_0008258g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.3e-12 74.3 153 35.3
Nitab4.5_0000187g0280 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.1e-11 73.2 90 41.1
Nitab4.5_0002735g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.7e-11 72.8 87 42.5
Nitab4.5_0014949g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.5e-11 72.4 96 41.7
Nitab4.5_0010449g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.6e-11 72.0 158 34.2
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 7.9e-11 71.2 155 35.5
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 7.9e-11 71.2 155 35.5
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.0e-10 70.9 155 35.5
CAN.G358.51 Capsicum annuum HOM05D002441 ORTHO05D002376 1.3e-10 70.5 167 34.7
Peaxi162Scf00588g00038 Petunia axillaris HOM05D002441 ORTHO05D002376 1.7e-10 70.1 125 34.4
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-10 69.3 85 40.0
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 3.9e-10 68.9 85 40.0
Nitab4.5_0002175g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.1e-10 68.6 101 36.6
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.1e-10 68.6 120 33.3
Nitab4.5_0026297g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.1e-10 68.6 91 44.0
CAN.G505.25 Capsicum annuum HOM05D002441 ORTHO05D002376 1.1e-09 67.4 156 28.2
Peaxi162Scf00774g00217 Petunia axillaris HOM05D002441 ORTHO05D002376 1.9e-09 66.6 204 26.5
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 1.9e-09 66.6 168 29.2
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-09 65.9 120 32.5
Nitab4.5_0008207g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.3e-09 65.5 86 39.5
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 5.6e-09 65.1 166 30.7
CAN.G681.71 Capsicum annuum HOM05D002441 ORTHO05D002376 5.6e-09 65.1 70 38.6
Nitab4.5_0009190g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.6e-09 64.3 91 40.7
CAN.G182.27 Capsicum annuum HOM05D002441 ORTHO05D002376 1.6e-08 63.5 160 30.0
arahy.Tifrunner.gnm1.ann1.D5SYT8 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.1e-08 63.2 82 34.1
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.8e-08 62.8 158 31.0
Nitab4.5_0013831g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.8e-08 62.8 129 31.8
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 6.2e-08 61.6 155 32.3
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 8.1e-08 61.2 128 28.9
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 60.8 84 33.3
arahy.Tifrunner.gnm1.ann1.K3U0KS Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 60.8 81 33.3
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 60.8 86 38.4
Peaxi162Scf00156g00109 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-07 60.8 119 31.9
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.8e-07 60.1 123 34.1
Peaxi162Scf00221g01114 Petunia axillaris HOM05D002441 ORTHO05D002376 1.8e-07 60.1 125 30.4
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 2.4e-07 59.7 86 38.4
Nitab4.5_0000681g0200 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.1e-07 59.3 62 43.5
Peaxi162Scf00070g00086 Petunia axillaris HOM05D002441 ORTHO05D002376 3.1e-07 59.3 126 32.5
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.D8EMDP Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 162 25.9
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
arahy.Tifrunner.gnm1.ann1.M437Z4 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 80 36.2
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-07 58.9 158 27.2
Nitab4.5_0000216g0290 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.3e-07 58.5 69 40.6
arahy.Tifrunner.gnm1.ann1.G9S7AV Arachis hypogaea HOM05D002441 ORTHO05D002376 6.9e-07 58.2 158 27.2
Nitab4.5_0001960g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.9e-07 58.2 57 45.6
arahy.Tifrunner.gnm1.ann1.BSJS1T Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-06 57.4 83 32.5
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-06 57.4 158 26.6
CAN.G193.15 Capsicum annuum HOM05D002441 ORTHO05D002376 1.2e-06 57.4 126 30.2
arahy.Tifrunner.gnm1.ann1.HC104Q Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-06 57.0 83 33.7
arahy.Tifrunner.gnm1.ann1.VXHT09 Arachis hypogaea HOM05D002689 ORTHO05D002376 2.0e-06 56.6 81 32.1
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.6e-06 56.2 83 33.7
Nitab4.5_0000090g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.6e-06 56.2 93 34.4
arahy.Tifrunner.gnm1.ann1.33R3MR Arachis hypogaea HOM05D002441 ORTHO05D002376 4.5e-06 55.5 84 33.3
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 4.5e-06 55.5 67 40.3
arahy.Tifrunner.gnm1.ann1.6U7VQG Arachis hypogaea HOM05D002441 ORTHO05D002376 4.5e-06 55.5 102 31.4
CAN.G628.5 Capsicum annuum HOM05D002441 ORTHO05D002376 4.5e-06 55.5 163 27.6
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 5.8e-06 55.1 123 27.6
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 5.8e-06 55.1 123 27.6
Nitab4.5_0000070g0310 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.9e-06 54.3 63 38.1


User provided reference genes

Program Settings