Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.2e-51 203.8 98 100.0
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 2.0e-36 155.6 161 55.3
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-35 150.6 92 72.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-33 145.2 97 69.1
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-33 144.8 78 79.5
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-33 144.4 92 68.5
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-33 143.7 97 67.0
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-30 136.3 84 70.2
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-30 133.7 77 72.7
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-28 128.6 97 60.8
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 1.3e-27 126.3 85 65.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-27 125.9 97 59.8
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-27 124.4 85 62.4
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 2.0e-25 119.0 69 72.5
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-25 117.5 71 67.6
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-24 116.7 130 47.7
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-24 115.9 63 76.2
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-24 115.2 97 56.7
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 5.0e-24 114.4 76 60.5
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-21 104.4 78 57.7
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-20 103.2 60 70.0
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.7e-20 100.9 58 70.7
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-18 96.7 79 55.7
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-17 93.2 71 59.2
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 2.0e-17 92.4 70 58.6
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-16 90.1 84 52.4
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-16 89.7 54 70.4
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.5e-16 87.4 94 44.7
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 6.5e-16 87.4 73 67.1
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.5e-16 87.0 106 48.1
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 1.9e-15 85.9 64 62.5
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.1e-14 80.9 83 47.0
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 6.8e-13 77.4 64 56.2
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 8.8e-13 77.0 64 53.1
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.2e-12 76.6 98 40.8
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.4e-12 75.1 79 44.3
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.7e-11 72.8 56 57.1
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.1e-10 70.1 89 38.2
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-10 69.3 57 54.4
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-10 68.9 57 52.6
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 4.1e-10 68.2 73 47.9
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 5.4e-10 67.8 79 40.5
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 7.0e-10 67.4 77 42.9
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 7.0e-10 67.4 79 40.5
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 3.5e-09 65.1 77 42.9
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 7.7e-09 63.9 77 41.6
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 7.7e-09 63.9 77 41.6
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 7.7e-09 63.9 77 41.6
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 7.7e-09 63.9 77 41.6
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.7e-09 63.9 67 47.8
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-08 63.2 124 33.1
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 1.7e-08 62.8 124 33.1
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 6.5e-08 60.8 52 53.8
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 8.5e-08 60.5 76 39.5
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 8.5e-08 60.5 52 53.8
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-07 59.7 83 36.1
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.9e-07 59.3 94 40.4
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-07 58.9 73 41.1
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-07 58.9 39 59.0
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 4.2e-07 58.2 77 37.7
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 4.2e-07 58.2 97 38.1
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.5e-07 57.8 88 38.6
AUR62040068 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.4e-07 57.0 78 37.2
AUR62024081 Chenopodium quinoa HOM05D003888 ORTHO05D003213 1.6e-06 56.2 73 38.4
AUR62037452 Chenopodium quinoa HOM05D000039 ORTHO05D007163 2.7e-06 55.5 73 38.4
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 4.7e-06 54.7 54 50.0
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 6.1e-06 54.3 63 41.3


User provided reference genes

Program Settings