Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040405 Solanum tuberosum HOM05D014983 ORTHO05D014445 8.1e-52 206.8 107 100.0
PGSC0003DMG400034844 Solanum tuberosum HOM05D014983 ORTHO05D014445 9.9e-50 199.9 107 96.3
PGSC0003DMG400041979 Solanum tuberosum HOM05D014983 ORTHO05D014445 9.9e-50 199.9 107 96.3
PGSC0003DMG400046316 Solanum tuberosum HOM05D014983 ORTHO05D014445 9.9e-50 199.9 107 96.3
PGSC0003DMG400043095 Solanum tuberosum HOM05D014983 ORTHO05D014445 3.7e-49 198.0 107 95.3
PGSC0003DMG400043823 Solanum tuberosum HOM05D014983 ORTHO05D014445 4.9e-49 197.6 107 95.3
PGSC0003DMG400035227 Solanum tuberosum HOM05D014983 ORTHO05D014445 1.2e-47 193.0 107 93.5
PGSC0003DMG400035826 Solanum tuberosum HOM05D014983 ORTHO05D014445 1.6e-47 192.6 107 93.5
PGSC0003DMG400042121 Solanum tuberosum HOM05D014983 ORTHO05D014445 7.8e-47 190.3 107 92.5
PGSC0003DMG400041171 Solanum tuberosum HOM05D014983 ORTHO05D014445 8.6e-46 186.8 107 90.7
Nitab4.5_0012488g0010 Nicotiana tabacum HOM05D000344 ORTHO05D000934 1.5e-29 132.9 108 69.4
Nitab4.5_0000131g0390 Nicotiana tabacum HOM05D000344 ORTHO05D000934 1.5e-26 122.9 87 78.2
CAN.G475.43 Capsicum annuum HOM05D000344 ORTHO05D000934 7.6e-26 120.6 97 71.1
Sopen00g005850 Solanum pennellii HOM05D000344 ORTHO05D000934 1.2e-23 113.2 67 88.1
Sopen04g029990 Solanum pennellii HOM05D000344 ORTHO05D014445 1.2e-23 113.2 67 88.1
Cc10_g15790 Coffea canephora HOM05D000344 ORTHO05D000934 3.2e-16 88.6 79 59.5
Dinv44850 Davidia involucrata HOM05D000344 ORTHO05D000934 5.1e-14 81.3 66 69.7
Dinv42624 Davidia involucrata HOM05D000344 ORTHO05D000934 4.3e-13 78.2 66 63.6
Actinidia19637 Actinidia chinensis HOM05D000344 ORTHO05D000934 1.8e-11 72.8 69 60.9
Hma1.2p1_0125F.1_g058980 Hydrangea macrophylla HOM05D000344 ORTHO05D000934 2.4e-11 72.4 66 60.6
TAR376G0948 Trochodendron aralioides HOM05D000344 ORTHO05D000934 2.4e-11 72.4 67 62.7
Actinidia29620 Actinidia chinensis HOM05D000344 ORTHO05D000934 3.1e-11 72.0 69 60.9
CANSAT25G0490 Cannabis sativa HOM05D000344 ORTHO05D000934 3.1e-11 72.0 68 55.9
Oeu049763.1 Olea europaea HOM05D000344 ORTHO05D000934 6.9e-11 70.9 104 41.3
vmacro21330 Vaccinium macrocarpon HOM05D000963 ORTHO05D014445 6.9e-11 70.9 63 60.3
Duzib093G0972 Durio zibethinus HOM05D000344 ORTHO05D000934 1.5e-10 69.7 67 56.7
Duzib041G0213 Durio zibethinus HOM05D000344 ORTHO05D000934 2.6e-10 68.9 67 55.2
Manes.02G145700 Manihot esculenta HOM05D000344 ORTHO05D000934 2.6e-10 68.9 67 59.7
Oeu061180.3 Olea europaea HOM05D000344 ORTHO05D000934 2.6e-10 68.9 63 55.6
Potri.005G156900 Populus trichocarpa HOM05D000344 ORTHO05D000934 4.5e-10 68.2 67 56.7
Rhsim06G0072600 Rhododendron simsii HOM05D000344 ORTHO05D000934 5.8e-10 67.8 63 55.6
COL.COLO4_35217 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.0e-09 67.0 67 58.2
EL10Ac1g01066 Beta vulgaris HOM05D000344 ORTHO05D000934 1.3e-09 66.6 68 57.4
Cpa.g.sc21.3 Carica papaya HOM05D000344 ORTHO05D000934 1.3e-09 66.6 77 53.2
Glyma.04G091700 Glycine max HOM05D000344 ORTHO05D000934 1.3e-09 66.6 67 58.2
Atru.chr13.1030 Acer truncatum HOM05D000344 ORTHO05D000934 1.7e-09 66.2 85 50.6
Gohir.D06G032100 Gossypium hirsutum HOM05D000344 ORTHO05D000934 1.7e-09 66.2 67 55.2
Gohir.A06G032616 Gossypium hirsutum HOM05D000344 ORTHO05D000934 2.2e-09 65.9 67 55.2
Gohir.D02G085800 Gossypium hirsutum HOM05D000344 ORTHO05D000934 2.2e-09 65.9 67 56.7
Gorai.005G096600 Gossypium raimondii HOM05D000344 ORTHO05D000934 2.2e-09 65.9 67 56.7
Gorai.010G035400 Gossypium raimondii HOM05D000344 ORTHO05D000934 2.2e-09 65.9 67 55.2
CiPaw.07G166700 Carya illinoinensis HOM05D000344 ORTHO05D000934 2.9e-09 65.5 62 54.8
Sabra02G0082300 Salix brachista HOM05D000344 ORTHO05D000934 2.9e-09 65.5 85 48.2
Hund16862 Selenicereus undatus HOM05D000344 ORTHO05D000934 2.9e-09 65.5 66 57.6
Gohir.A02G078600 Gossypium hirsutum HOM05D000344 ORTHO05D000934 3.8e-09 65.1 67 56.7
Actinidia10378 Actinidia chinensis HOM05D000344 ORTHO05D000934 6.5e-09 64.3 63 57.1
MD08G1196200 Malus domestica HOM05D000344 ORTHO05D000934 6.5e-09 64.3 68 55.9
Sabra05G0120400 Salix brachista HOM05D000344 ORTHO05D000934 6.5e-09 64.3 67 55.2
Actinidia30822 Actinidia chinensis HOM05D000344 ORTHO05D000934 8.4e-09 63.9 63 60.3
Ca_15995_v3 Cicer arietinum L. HOM05D000344 ORTHO05D000934 8.4e-09 63.9 78 48.7
Nn1g05539 Nelumbo nucifera HOM05D000344 ORTHO05D000934 8.4e-09 63.9 67 50.7
Potri.002G104800 Populus trichocarpa HOM05D000344 ORTHO05D000934 8.4e-09 63.9 66 56.1
CSS0024089 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D000934 1.1e-08 63.5 63 58.7
Thecc.08G069400 Theobroma cacao HOM05D000344 ORTHO05D000934 1.1e-08 63.5 67 53.7
Ciclev10000079m.g Citrus clementina HOM05D000344 ORTHO05D000934 1.9e-08 62.8 68 54.4
TPR.G26069 Trifolium pratense HOM05D000344 ORTHO05D000934 1.9e-08 62.8 63 52.4
TAR625G1132 Trochodendron aralioides HOM05D000344 ORTHO05D000934 1.9e-08 62.8 67 52.2
GSVIVG01009158001 Vitis vinifera HOM05D000344 ORTHO05D000934 1.9e-08 62.8 63 54.0
Duzib116G0675 Durio zibethinus HOM05D000344 ORTHO05D000934 2.5e-08 62.4 67 53.7
Lsat_1_v5_gn_9_76000 Lactuca sativa HOM05D000344 ORTHO05D000934 3.2e-08 62.0 66 50.0
Manes.18G059900 Manihot esculenta HOM05D000344 ORTHO05D000934 3.2e-08 62.0 78 52.6
Ah.05g170780 Amaranthus hybridus HOM05D000344 ORTHO05D000934 4.2e-08 61.6 78 46.2
ClCG08G011730 Citrullus lanatus HOM05D000344 ORTHO05D000934 4.2e-08 61.6 68 54.4
Medtr5g066000 Medicago truncatula HOM05D000344 ORTHO05D000934 4.2e-08 61.6 68 48.5
Lj4C735T7 Lonicera japonica HOM05D000344 ORTHO05D000934 5.5e-08 61.2 82 46.3
Lalb_Chr08g0242461 Lupinus albus HOM05D000344 ORTHO05D000934 5.5e-08 61.2 68 47.1
MELO3C011097.2 Cucumis melo HOM05D000344 ORTHO05D000934 7.1e-08 60.8 63 57.1
LjContig00408g0026735 Lotus japonicus HOM05D000344 ORTHO05D000934 7.1e-08 60.8 67 49.3
TPR.G16004 Trifolium pratense HOM05D000344 ORTHO05D000934 7.1e-08 60.8 68 50.0
Hund27014 Selenicereus undatus HOM05D000344 ORTHO05D000934 9.3e-08 60.5 70 52.9
Aqoxy5G01314 Aquilegia oxysepala HOM05D000344 ORTHO05D000934 1.2e-07 60.1 70 41.4
AUR62027875 Chenopodium quinoa HOM05D000344 ORTHO05D000934 1.2e-07 60.1 72 54.2
Lj1g0002541 Lotus japonicus HOM05D000344 ORTHO05D000934 1.2e-07 60.1 67 53.7
TWI12G0547 Tripterygium wilfordii HOM05D000344 ORTHO05D000934 1.2e-07 60.1 67 55.2
TWI56G1435 Tripterygium wilfordii HOM05D000344 ORTHO05D000934 1.2e-07 60.1 67 53.7
Prupe.1G530100 Prunus persica HOM05D000344 ORTHO05D000934 1.6e-07 59.7 67 53.7
Cfa013689 Carpinus fangiana HOM05D000344 ORTHO05D000934 2.1e-07 59.3 60 53.3
DCAR_012860 Daucus carota HOM05D000344 ORTHO05D000934 2.1e-07 59.3 67 52.2
MD15G1384000 Malus domestica HOM05D000344 ORTHO05D000934 2.1e-07 59.3 67 49.3
Medtr3g100480 Medicago truncatula HOM05D000344 ORTHO05D000934 2.1e-07 59.3 67 49.3
BcaNung04965 Brassica carinata HOM05D000344 ORTHO05D000934 2.7e-07 58.9 68 50.0
CSS0017298 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D000934 2.7e-07 58.9 69 53.6
CSS0032567 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D000934 2.7e-07 58.9 69 53.6
Aa31LG4G9660 Aethionema arabicum HOM05D000344 ORTHO05D000934 3.5e-07 58.5 77 46.8
CiPaw.08G054800 Carya illinoinensis HOM05D000344 ORTHO05D000934 3.5e-07 58.5 73 50.7
Glyma.06G093500 Glycine max HOM05D000344 ORTHO05D000934 3.5e-07 58.5 67 47.8
Lalb_Chr04g0252901 Lupinus albus HOM05D000344 ORTHO05D000934 4.6e-07 58.2 67 53.7
arahy.Tifrunner.gnm1.ann1.14BCP7 Arachis hypogaea HOM05D000344 ORTHO05D014445 6.0e-07 57.8 66 47.0
arahy.Tifrunner.gnm1.ann1.V86AIC Arachis hypogaea HOM05D000344 ORTHO05D000934 6.0e-07 57.8 66 47.0
BcaC09g50853 Brassica carinata HOM05D000344 ORTHO05D000934 6.0e-07 57.8 68 45.6
A01p15920 Brassica napus HOM05D000344 ORTHO05D000934 6.0e-07 57.8 68 45.6
C01p19890 Brassica napus HOM05D000344 ORTHO05D000934 6.0e-07 57.8 68 45.6
BolC1t01917H Brassica oleracea HOM05D000344 ORTHO05D000934 6.0e-07 57.8 68 45.6
Ca_05424_v3 Cicer arietinum L. HOM05D000344 ORTHO05D000934 6.0e-07 57.8 63 50.8
Haze_22330 Corylus avellana HOM05D000344 ORTHO05D000934 6.0e-07 57.8 60 51.7
Psat2g066240 Pisum sativum HOM05D000344 ORTHO05D000934 6.0e-07 57.8 69 53.6
QL09p017563 Quercus lobata HOM05D000344 ORTHO05D000934 6.0e-07 57.8 61 52.5
BraA01t01526Z Brassica rapa HOM05D000344 ORTHO05D000934 7.9e-07 57.4 68 45.6
Sc01g0001120 Simmondsia chinensis HOM05D000344 ORTHO05D000934 7.9e-07 57.4 68 50.0
BcaC06g32875 Brassica carinata HOM05D000344 ORTHO05D000934 1.0e-06 57.0 78 47.4
ClCG11G014530 Citrullus lanatus HOM05D000344 ORTHO05D000934 1.0e-06 57.0 66 50.0
PGR042G3569 Punica granatum HOM05D000344 ORTHO05D000934 1.0e-06 57.0 62 53.2
THA.LOC104799803 Tarenaya hassleriana HOM05D000344 ORTHO05D000934 1.0e-06 57.0 77 45.5
vmacro04658 Vaccinium macrocarpon HOM05D000344 ORTHO05D000934 1.0e-06 57.0 66 48.5
CsaV3_2G030350 Cucumis sativus L. HOM05D000344 ORTHO05D000934 1.3e-06 56.6 63 52.4
Sed0001827 Sechium edule HOM05D000344 ORTHO05D000934 1.3e-06 56.6 66 57.6
Hund11611 Selenicereus undatus HOM05D006468 ORTHO05D006908 1.3e-06 56.6 67 55.2
TAR628G1265 Trochodendron aralioides HOM05D000344 ORTHO05D000934 1.3e-06 56.6 67 50.7
Eucgr.F00414 Eucalyptus grandis HOM05D000344 ORTHO05D000934 1.8e-06 56.2 77 46.8
Psat5g046280 Pisum sativum HOM05D000344 ORTHO05D000934 1.8e-06 56.2 62 54.8
AUR62019038 Chenopodium quinoa HOM05D000344 ORTHO05D000934 2.3e-06 55.8 72 52.8
arahy.Tifrunner.gnm1.ann1.YU5GZ6 Arachis hypogaea HOM05D000344 ORTHO05D000934 3.0e-06 55.5 68 48.5
CsaV3_3G047940 Cucumis sativus L. HOM05D000344 ORTHO05D000934 3.0e-06 55.5 66 47.0
Lalb_Chr10g0102701 Lupinus albus HOM05D000344 ORTHO05D000934 3.0e-06 55.5 66 51.5
Lalb_Chr17g0344471 Lupinus albus HOM05D000344 ORTHO05D000934 3.0e-06 55.5 66 51.5
Nn5g29911 Nelumbo nucifera HOM05D000344 ORTHO05D000934 3.0e-06 55.5 46 54.3
arahy.Tifrunner.gnm1.ann1.6IR4P8 Arachis hypogaea HOM05D000344 ORTHO05D000934 3.9e-06 55.1 68 48.5
Sed0005755 Sechium edule HOM05D000344 ORTHO05D000934 3.9e-06 55.1 78 42.3
Sed0015689 Sechium edule HOM05D000344 ORTHO05D000934 5.1e-06 54.7 62 53.2
THA.LOC104803423 Tarenaya hassleriana HOM05D000344 ORTHO05D000934 6.7e-06 54.3 66 48.5
Aqoxy6G01449 Aquilegia oxysepala HOM05D000344 ORTHO05D000934 8.7e-06 53.9 66 45.5
PGR031G2385 Punica granatum HOM05D000344 ORTHO05D000934 8.7e-06 53.9 62 51.6


User provided reference genes

Program Settings