Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040359 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.5e-175 619.4 302 100.0
Sopen12g011460 Solanum pennellii HOM05D010553 ORTHO05D000034 1.3e-83 313.9 251 64.9
PGSC0003DMG400037635 Solanum tuberosum HOM05D010553 ORTHO05D000034 5.0e-75 285.4 345 47.8
PGSC0003DMG400009723 Solanum tuberosum HOM05D003808 ORTHO05D008840 3.6e-73 279.3 367 46.3
PGSC0003DMG400040935 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.4e-69 267.3 303 51.2
PGSC0003DMG400042649 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.6e-65 253.8 157 75.8
PGSC0003DMG400036702 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.4e-64 250.8 302 51.7
Sopen05g027980 Solanum pennellii HOM05D010553 ORTHO05D000034 7.1e-61 238.4 157 71.3
Sopen03g011580 Solanum pennellii HOM05D000004 ORTHO05D000034 3.5e-60 236.1 267 47.9
Sopen12g010150 Solanum pennellii HOM05D000004 ORTHO05D000034 4.3e-58 229.2 327 43.1
Sopen08g012020 Solanum pennellii HOM05D010553 ORTHO05D000034 9.5e-58 228.0 157 68.8
Sopen11g016350 Solanum pennellii HOM05D010553 ORTHO05D000034 1.1e-56 224.6 152 70.4
Sopen11g016470 Solanum pennellii HOM05D010553 ORTHO05D000034 5.8e-55 218.8 360 39.4
Sopen06g013690 Solanum pennellii HOM05D010553 ORTHO05D000034 2.2e-54 216.9 157 65.0
Sopen09g023530 Solanum pennellii HOM05D010553 ORTHO05D000034 2.5e-50 203.4 157 64.3
PGSC0003DMG400035681 Solanum tuberosum HOM05D010553 ORTHO05D000034 3.6e-49 199.5 125 73.6
PGSC0003DMG400042540 Solanum tuberosum HOM05D010553 ORTHO05D000034 7.6e-47 191.8 128 71.9
PGSC0003DMG400035603 Solanum tuberosum HOM05D010553 ORTHO05D000034 6.6e-43 178.7 116 69.8
PGSC0003DMG400043417 Solanum tuberosum HOM05D010553 ORTHO05D000034 4.8e-41 172.6 268 38.8
Sopen07g019250 Solanum pennellii HOM05D000004 ORTHO05D000034 3.8e-38 162.9 233 44.2
Sopen12g020490 Solanum pennellii HOM05D010553 ORTHO05D000034 1.4e-37 161.0 224 45.1
Sopen12g013830 Solanum pennellii HOM05D010553 ORTHO05D000034 1.2e-36 157.9 172 51.7
Sopen12g027490 Solanum pennellii HOM05D000014 ORTHO05D000016 2.4e-32 143.7 329 35.3
Sopen10g012740 Solanum pennellii HOM05D010553 ORTHO05D000034 6.9e-32 142.1 84 78.6
Sopen05g020230 Solanum pennellii HOM05D010553 ORTHO05D000034 1.3e-30 137.9 246 39.4
Sopen04g014330 Solanum pennellii HOM05D000014 ORTHO05D000016 3.5e-28 129.8 108 54.6
Sopen11g016480 Solanum pennellii HOM05D010553 ORTHO05D000034 3.5e-28 129.8 100 63.0
PGSC0003DMG400047000 Solanum tuberosum HOM05D000004 ORTHO05D000002 2.8e-25 120.2 69 84.1
SHI50774 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-14 83.2 138 37.7
SHI51461 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-14 83.2 138 37.7
SHI53605 Sapria himalayana HOM05D000004 ORTHO05D000002 6.5e-14 82.4 138 37.0
SHI47577 Sapria himalayana HOM05D000004 ORTHO05D000002 8.4e-14 82.0 138 37.0
SHI50214 Sapria himalayana HOM05D000004 ORTHO05D000002 8.4e-14 82.0 138 36.2
SHI51991 Sapria himalayana HOM05D000004 ORTHO05D000002 8.4e-14 82.0 138 36.2
SHI37684 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-13 81.6 136 37.5
SHI53900 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-13 81.6 138 37.0
SHI54189 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-13 81.3 138 37.0
SHI42770 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-13 80.1 137 38.0
SHI42953 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-13 80.1 137 38.0
SHI38968 Sapria himalayana HOM05D000004 ORTHO05D000002 7.2e-13 79.0 138 36.2
SHI53379 Sapria himalayana HOM05D000004 ORTHO05D000002 7.2e-13 79.0 138 36.2
SHI44390 Sapria himalayana HOM05D000004 ORTHO05D000002 4.6e-12 76.3 136 33.8
SHI34683 Sapria himalayana HOM05D000004 ORTHO05D000034 7.9e-12 75.5 136 33.1
SHI37742 Sapria himalayana HOM05D000004 ORTHO05D000002 7.9e-12 75.5 294 25.5
SHI43801 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-11 75.1 135 33.3
SHI46232 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-11 73.2 136 34.6
MELO3C033340.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.1e-11 72.8 84 35.7
SHI38740 Sapria himalayana HOM05D000004 ORTHO05D000002 5.1e-11 72.8 131 33.6
SHI48165 Sapria himalayana HOM05D000004 ORTHO05D000002 5.1e-11 72.8 136 34.6
Oeu022994.1 Olea europaea HOM05D008284 ORTHO05D000224 1.5e-10 71.2 62 45.2
SHI40336 Sapria himalayana HOM05D000004 ORTHO05D000002 1.9e-10 70.9 136 33.1
Oeu018629.1 Olea europaea HOM05D008284 ORTHO05D000224 2.5e-10 70.5 74 40.5
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.3e-10 70.1 91 36.3
MELO3C029128.2 Cucumis melo HOM05D000004 ORTHO05D000224 1.3e-09 68.2 82 37.8
Sopen11g012830 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-09 68.2 256 26.2
FvH4_2g08031 Fragaria vesca HOM05D000004 ORTHO05D012516 1.6e-09 67.8 268 24.3
MELO3C028093.2 Cucumis melo HOM05D000004 ORTHO05D000034 2.2e-09 67.4 95 34.7
MELO3C032168.2 Cucumis melo HOM05D007786 ORTHO05D000224 2.2e-09 67.4 73 37.0
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 4.8e-09 66.2 95 34.7
ClCG04G003440 Citrullus lanatus HOM05D000004 ORTHO05D000034 6.3e-09 65.9 113 33.6
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 6.3e-09 65.9 73 37.0
Oeu047484.1 Olea europaea HOM05D008284 ORTHO05D000034 6.3e-09 65.9 77 40.3
Hma1.2p1_0142F.1_g064210 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 8.2e-09 65.5 67 38.8
Sabra16G0105500 Salix brachista HOM05D011124 ORTHO05D000224 8.2e-09 65.5 201 27.9
ClCG08G003900 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.1e-08 65.1 68 39.7
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.1e-08 65.1 63 39.7
MELO3C032614.2 Cucumis melo HOM05D007786 ORTHO05D000224 1.4e-08 64.7 73 35.6
Hma1.2p1_1167F.1_g263020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.4e-08 64.7 80 36.2
MELO3C029662.2 Cucumis melo HOM05D007786 ORTHO05D009980 1.8e-08 64.3 60 40.0
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.8e-08 64.3 63 39.7
Oeu018768.1 Olea europaea HOM05D008284 ORTHO05D000224 1.8e-08 64.3 50 50.0
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 1.8e-08 64.3 83 37.3
Oeu064005.1 Olea europaea HOM05D000004 ORTHO05D000034 2.4e-08 63.9 65 43.1
Oeu011745.1 Olea europaea HOM05D000004 ORTHO05D000224 3.1e-08 63.5 58 43.1
Oeu050910.1 Olea europaea HOM05D000004 ORTHO05D000224 6.9e-08 62.4 58 41.4
FvH4_4g15585 Fragaria vesca HOM05D000004 ORTHO05D000002 9.0e-08 62.0 139 32.4
Oeu032736.1 Olea europaea HOM05D000004 ORTHO05D000224 9.0e-08 62.0 58 41.4
Oeu051746.1 Olea europaea HOM05D000004 ORTHO05D000224 9.0e-08 62.0 58 41.4
Oeu060665.1 Olea europaea HOM05D008284 ORTHO05D000224 9.0e-08 62.0 74 39.2
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.2e-07 61.6 63 36.5
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.2e-07 61.6 87 33.3
Oeu047631.1 Olea europaea HOM05D000004 ORTHO05D000224 1.2e-07 61.6 58 41.4
Oeu048099.1 Olea europaea HOM05D008284 ORTHO05D000034 1.2e-07 61.6 65 41.5
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 1.5e-07 61.2 58 41.4
Oeu051352.1 Olea europaea HOM05D000004 ORTHO05D000224 1.5e-07 61.2 58 41.4
Oeu054402.1 Olea europaea HOM05D000004 ORTHO05D000224 1.5e-07 61.2 58 39.7
SHI49998 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-07 60.8 69 40.6
BcaC01g03214 Brassica carinata HOM05D012295 ORTHO05D000224 2.6e-07 60.5 126 31.0
ClCG02G010440 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.6e-07 60.5 108 30.6
Oeu013930.1 Olea europaea HOM05D008284 ORTHO05D000034 2.6e-07 60.5 62 43.5
Oeu023218.1 Olea europaea HOM05D008284 ORTHO05D000034 2.6e-07 60.5 70 40.0
Sed0000778 Sechium edule HOM05D000004 ORTHO05D000034 2.6e-07 60.5 90 30.0
Oeu026329.1 Olea europaea HOM05D008284 ORTHO05D000034 3.4e-07 60.1 62 41.9
Oeu045530.1 Olea europaea HOM05D008284 ORTHO05D000224 3.4e-07 60.1 62 40.3
FvH4_4g09243 Fragaria vesca HOM05D000004 ORTHO05D000002 4.5e-07 59.7 151 31.1
FvH4_4g15292 Fragaria vesca HOM05D000004 ORTHO05D000002 4.5e-07 59.7 149 30.2
FvH4_7g07581 Fragaria vesca HOM05D000004 ORTHO05D000002 4.5e-07 59.7 261 23.0
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 4.5e-07 59.7 58 39.7
SHI41336 Sapria himalayana HOM05D000004 ORTHO05D000002 4.5e-07 59.7 138 33.3
SHI54165 Sapria himalayana HOM05D000004 ORTHO05D000002 4.5e-07 59.7 69 42.0
Manes.12G118805 Manihot esculenta HOM05D000004 ORTHO05D000034 5.9e-07 59.3 66 43.9
Manes.14G148397 Manihot esculenta HOM05D000004 ORTHO05D000034 5.9e-07 59.3 66 43.9
Manes.14G148419 Manihot esculenta HOM05D000004 ORTHO05D000034 5.9e-07 59.3 66 43.9
Oeu027955.1 Olea europaea HOM05D008284 ORTHO05D000224 5.9e-07 59.3 74 36.5
Oeu061980.1 Olea europaea HOM05D000004 ORTHO05D000224 5.9e-07 59.3 58 39.7
Rhsim02G0115700 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.9e-07 59.3 59 44.1
Manes.08G134411 Manihot esculenta HOM05D000004 ORTHO05D000034 7.7e-07 58.9 92 35.9
Manes.18G144913 Manihot esculenta HOM05D000004 ORTHO05D000034 7.7e-07 58.9 92 34.8
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-06 58.5 61 39.3
Rhsim03G0130600 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.0e-06 58.5 59 42.4
CANSAT11G1617 Cannabis sativa HOM05D000004 ORTHO05D000034 1.3e-06 58.2 60 33.3
Manes.07G081133 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 58.2 74 37.8
Manes.15G183710 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 58.2 66 42.4
Manes.16G051801 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 58.2 66 42.4
Manes.18G145815 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 58.2 74 37.8
Ca_19726_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.7e-06 57.8 80 38.8
Manes.01G066666 Manihot esculenta HOM05D000004 ORTHO05D000034 1.7e-06 57.8 66 42.4
Manes.07G076922 Manihot esculenta HOM05D000004 ORTHO05D000034 1.7e-06 57.8 66 42.4
Manes.16G075950 Manihot esculenta HOM05D000004 ORTHO05D000034 1.7e-06 57.8 66 42.4
Manes.18G139308 Manihot esculenta HOM05D000004 ORTHO05D000034 1.7e-06 57.8 66 42.4
Manes.18G140597 Manihot esculenta HOM05D000004 ORTHO05D000034 1.7e-06 57.8 66 42.4
Rhsim02G0020600 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 57.8 59 42.4
Rhsim04G0149400 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 57.8 59 42.4
Rhsim06G0134400 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.7e-06 57.8 59 42.4
Rhsim11G0017800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 57.8 59 42.4
RcHm_v2.0_Chr4g0403481 Rosa chinensis HOM05D000004 ORTHO05D000224 1.7e-06 57.8 83 34.9
RcHm_v2.0_Chr7g0237801 Rosa chinensis HOM05D000004 ORTHO05D000034 1.7e-06 57.8 93 31.2
RcHm_v2.0_Chr7g0237821 Rosa chinensis HOM05D000004 ORTHO05D000034 1.7e-06 57.8 93 31.2
BcaC05g26456 Brassica carinata HOM05D012295 ORTHO05D000224 2.2e-06 57.4 56 44.6
BcaC09g49308 Brassica carinata HOM05D012295 ORTHO05D000224 2.2e-06 57.4 80 37.5
PGR031G1649 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-06 57.4 196 26.0
MELO3C033978.2 Cucumis melo HOM05D008649 ORTHO05D000034 2.9e-06 57.0 91 33.0
Oeu000946.1 Olea europaea HOM05D000004 ORTHO05D000224 2.9e-06 57.0 58 37.9
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 2.9e-06 57.0 59 40.7
Oeu047013.1 Olea europaea HOM05D008284 ORTHO05D000034 2.9e-06 57.0 78 35.9
Ca_12432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 3.8e-06 56.6 199 24.1
Manes.10G099101 Manihot esculenta HOM05D000004 ORTHO05D000034 3.8e-06 56.6 66 40.9
Rhsim07G0206500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.8e-06 56.6 59 40.7
Oeu045669.1 Olea europaea HOM05D008284 ORTHO05D000224 5.0e-06 56.2 70 38.6
Oeu054732.1 Olea europaea HOM05D008284 ORTHO05D000224 5.0e-06 56.2 74 35.1
Rhsim11G0061300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.0e-06 56.2 59 40.7
RcHm_v2.0_Chr4g0397711 Rosa chinensis HOM05D000004 ORTHO05D000224 5.0e-06 56.2 73 34.2
Sopen01g018040 Solanum pennellii HOM05D000004 ORTHO05D000034 5.0e-06 56.2 36 72.2
MELO3C035074.2 Cucumis melo HOM05D008649 ORTHO05D009980 6.5e-06 55.8 69 34.8
ECA247G0057 Erigeron canadensis HOM05D010708 ORTHO05D011331 6.5e-06 55.8 62 37.1
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 6.5e-06 55.8 84 32.1
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 6.5e-06 55.8 48 41.7
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 8.5e-06 55.5 62 35.5
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 8.5e-06 55.5 62 35.5
ECA232G2839 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.5e-06 55.5 63 34.9
Oeu009202.1 Olea europaea HOM05D008284 ORTHO05D000224 8.5e-06 55.5 62 38.7
Oeu018971.1 Olea europaea HOM05D008284 ORTHO05D000224 8.5e-06 55.5 62 38.7


User provided reference genes

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