Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040356 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.2e-34 147.9 76 100.0
PGSC0003DMG400047047 Solanum tuberosum HOM05D006181 ORTHO05D008560 9.9e-20 99.8 75 73.3
PGSC0003DMG400038736 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.3e-19 96.7 59 84.7
PGSC0003DMG400042962 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.1e-18 96.3 65 80.0
PGSC0003DMG400035219 Solanum tuberosum HOM05D000004 ORTHO05D003926 7.1e-18 93.6 92 60.9
PGSC0003DMG400045079 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.1e-18 93.6 63 77.8
PGSC0003DMG400030756 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.5e-17 91.3 66 74.2
PGSC0003DMG400035604 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.8e-17 90.1 57 82.5
Sopen08g017680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-16 88.6 71 71.8
PGSC0003DMG400038749 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.0e-16 88.2 60 75.0
Sopen11g011940 Solanum pennellii HOM05D000004 ORTHO05D000034 3.9e-16 87.8 60 78.3
PGSC0003DMG400037281 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.9e-16 87.8 62 75.8
PGSC0003DMG400045687 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.9e-16 87.8 61 77.0
Sopen04g018540 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-16 87.0 60 75.0
PGSC0003DMG400035041 Solanum tuberosum HOM05D000004 ORTHO05D000034 6.6e-16 87.0 60 76.7
PGSC0003DMG400037408 Solanum tuberosum HOM05D000004 ORTHO05D000034 6.6e-16 87.0 56 82.1
Sopen02g010460 Solanum pennellii HOM05D000004 ORTHO05D003926 1.1e-15 86.3 60 71.7
Sopen03g019270 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-15 85.9 60 75.0
Sopen07g008620 Solanum pennellii HOM05D000004 ORTHO05D000034 2.5e-15 85.1 60 75.0
PGSC0003DMG400034641 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.5e-15 85.1 63 71.4
Sopen10g014560 Solanum pennellii HOM05D000004 ORTHO05D000034 3.3e-15 84.7 60 70.0
PGSC0003DMG400034941 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.3e-15 84.7 65 67.7
Sopen04g018590 Solanum pennellii HOM05D000004 ORTHO05D000034 9.5e-15 83.2 60 73.3
Sopen05g011460 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-14 82.8 60 71.7
Sopen01g026010 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-14 82.0 60 70.0
Sopen07g007150 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-14 82.0 60 71.7
Sopen07g008310 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-14 82.0 60 73.3
PGSC0003DMG400046682 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.1e-14 82.0 57 73.7
PGSC0003DMG400039765 Solanum tuberosum HOM05D000004 ORTHO05D003926 2.8e-14 81.6 60 70.0
PGSC0003DMG400047335 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.6e-14 81.3 60 71.7
Sopen01g021260 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-14 80.5 59 72.9
Sopen04g015410 Solanum pennellii HOM05D000004 ORTHO05D000034 8.1e-14 80.1 58 75.9
Sopen04g020600 Solanum pennellii HOM05D000004 ORTHO05D000034 8.1e-14 80.1 60 73.3
Sopen05g014060 Solanum pennellii HOM05D000004 ORTHO05D000034 8.1e-14 80.1 62 69.4
PGSC0003DMG400044773 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.1e-14 80.1 64 67.2
PGSC0003DMG400046629 Solanum tuberosum HOM05D015884 ORTHO05D000034 8.1e-14 80.1 63 68.3
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 1.1e-13 79.7 63 66.7
Sopen12g017190 Solanum pennellii HOM05D000004 ORTHO05D000034 1.1e-13 79.7 75 61.3
Sopen12g024600 Solanum pennellii HOM05D000004 ORTHO05D000034 1.1e-13 79.7 60 73.3
PGSC0003DMG400043807 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.1e-13 79.7 53 81.1
Sopen07g018540 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-13 79.3 62 69.4
Sopen04g015450 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-13 79.0 63 71.4
PGSC0003DMG400040912 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.4e-13 78.6 61 70.5
PGSC0003DMG400044926 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.4e-13 78.6 70 61.4
Sopen03g021240 Solanum pennellii HOM05D000014 ORTHO05D000016 3.1e-13 78.2 55 78.2
Sopen06g010950 Solanum pennellii HOM05D000004 ORTHO05D000034 3.1e-13 78.2 54 74.1
Sopen08g018840 Solanum pennellii HOM05D000004 ORTHO05D000034 3.1e-13 78.2 60 63.3
Sopen12g017980 Solanum pennellii HOM05D031357 ORTHO05D000034 3.1e-13 78.2 59 71.2
Sopen04g020570 Solanum pennellii HOM05D000004 ORTHO05D000034 4.0e-13 77.8 61 63.9
Sopen07g007270 Solanum pennellii HOM05D000004 ORTHO05D000034 4.0e-13 77.8 52 78.8
Sopen07g008570 Solanum pennellii HOM05D000004 ORTHO05D000034 4.0e-13 77.8 60 68.3
PGSC0003DMG400041900 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.0e-13 77.8 58 74.1
PGSC0003DMG400045438 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.0e-13 77.8 58 75.9
Sopen04g011870 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-13 77.4 60 73.3
Sopen04g015350 Solanum pennellii HOM05D000004 ORTHO05D000034 5.2e-13 77.4 60 73.3
Sopen09g021060 Solanum pennellii HOM05D000004 ORTHO05D000034 5.2e-13 77.4 57 75.4
PGSC0003DMG400010854 Solanum tuberosum HOM05D000004 ORTHO05D000034 6.8e-13 77.0 62 74.2
Sopen04g024080 Solanum pennellii HOM05D000004 ORTHO05D000034 8.9e-13 76.6 58 74.1
Sopen04g015420 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-12 76.3 47 83.0
PGSC0003DMG400035997 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-12 76.3 70 60.0
PGSC0003DMG400041196 Solanum tuberosum HOM05D006181 ORTHO05D000034 1.2e-12 76.3 62 69.4
Sopen11g019870 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-12 75.9 60 66.7
Sopen12g017310 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-12 75.9 60 68.3
Sopen03g014710 Solanum pennellii HOM05D000004 ORTHO05D000034 2.0e-12 75.5 56 71.4
Sopen05g022820 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-12 75.5 58 69.0
Sopen05g027020 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-12 75.5 64 68.8
Sopen11g014260 Solanum pennellii HOM05D000014 ORTHO05D000093 2.0e-12 75.5 57 70.2
Sopen11g020920 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-12 75.1 67 59.7
PGSC0003DMG400009680 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.6e-12 75.1 60 70.0
Sopen11g019920 Solanum pennellii HOM05D000014 ORTHO05D000016 3.4e-12 74.7 63 65.1
Sopen03g012640 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-12 74.3 49 81.6
Sopen01g007260 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-12 73.9 64 62.5
Sopen07g021040 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-12 73.9 60 68.3
Sopen01g007250 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-12 73.6 67 58.2
Sopen02g010850 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-12 73.6 54 72.2
Sopen04g019800 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-12 73.6 58 65.5
Sopen10g007550 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-12 73.6 54 74.1
Sopen12g016730 Solanum pennellii HOM05D000014 ORTHO05D000016 7.6e-12 73.6 54 72.2
Sopen03g017110 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-11 72.8 57 68.4
PGSC0003DMG400045926 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.3e-11 72.8 53 73.6
Sopen00g007670 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-11 72.4 52 75.0
Sopen09g024020 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-11 72.4 52 75.0
Sopen11g019900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-11 72.4 55 69.1
Sopen12g012740 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-11 72.4 60 65.0
Sopen08g018290 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-11 72.0 62 62.9
Sopen04g020070 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-11 71.6 47 78.7
Sopen07g013210 Solanum pennellii HOM05D000004 ORTHO05D003926 2.9e-11 71.6 57 68.4
Sopen07g005880 Solanum pennellii HOM05D000004 ORTHO05D003926 3.8e-11 71.2 60 65.0
PGSC0003DMG400034451 Solanum tuberosum HOM05D000004 ORTHO05D003926 3.8e-11 71.2 47 78.7
Sopen07g019380 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-11 70.5 48 77.1
Sopen05g016300 Solanum pennellii HOM05D000004 ORTHO05D000034 8.4e-11 70.1 52 71.2
Sopen09g009630 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 70.1 75 53.3
PGSC0003DMG400035149 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.4e-11 70.1 59 69.5
Sopen01g010950 Solanum pennellii HOM05D000004 ORTHO05D003926 1.1e-10 69.7 58 65.5
Sopen01g007140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-10 69.3 61 59.0
Sopen01g013230 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-10 69.3 60 61.7
Sopen03g011250 Solanum pennellii HOM05D000004 ORTHO05D003926 1.4e-10 69.3 59 66.1
PGSC0003DMG400037849 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.4e-10 69.3 64 57.8
PGSC0003DMG400038788 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.4e-10 69.3 61 63.9
Sopen10g015100 Solanum pennellii HOM05D000004 ORTHO05D000034 1.9e-10 68.9 60 65.0
Sopen02g009670 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-10 68.6 59 62.7
PGSC0003DMG400046893 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.4e-10 68.6 77 57.1
Sopen07g015720 Solanum pennellii HOM05D000047 ORTHO05D000044 5.4e-10 67.4 62 64.5
PGSC0003DMG400046603 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.4e-10 67.4 49 73.5
Sopen04g011730 Solanum pennellii HOM05D000014 ORTHO05D000093 7.1e-10 67.0 56 66.1
Sopen12g024760 Solanum pennellii HOM05D000004 ORTHO05D000034 7.1e-10 67.0 48 68.8
PGSC0003DMG400036388 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.1e-10 67.0 61 62.3
Sopen12g012640 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-10 66.6 52 67.3
PGSC0003DMG400040330 Solanum tuberosum HOM05D000004 ORTHO05D003926 9.2e-10 66.6 50 74.0
PGSC0003DMG400046383 Solanum tuberosum HOM05D000004 ORTHO05D003926 9.2e-10 66.6 62 61.3
Sopen01g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-09 66.2 60 63.3
Sopen03g015760 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-09 66.2 60 61.7
Sopen12g012760 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-09 66.2 47 72.3
Sopen08g009020 Solanum pennellii HOM05D000004 ORTHO05D000034 1.6e-09 65.9 61 63.9
Sopen01g021240 Solanum pennellii HOM05D000014 ORTHO05D000016 2.1e-09 65.5 60 61.7
Sopen09g013730 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-09 65.5 44 77.3
Sopen08g012050 Solanum pennellii HOM05D002038 ORTHO05D002165 2.7e-09 65.1 44 77.3
PGSC0003DMG400039996 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.7e-09 65.1 68 60.3
Sopen05g016490 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-09 64.7 60 63.3
Sopen07g017860 Solanum pennellii HOM05D000004 ORTHO05D000034 3.5e-09 64.7 54 63.0
Sopen10g007520 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-09 64.7 83 48.2
Sopen02g003160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-09 64.3 55 65.5
Sopen09g021240 Solanum pennellii HOM05D000004 ORTHO05D000034 4.6e-09 64.3 60 63.3
Sopen10g017890 Solanum pennellii HOM05D000004 ORTHO05D000034 6.0e-09 63.9 58 60.3
Sopen11g010620 Solanum pennellii HOM05D000004 ORTHO05D000034 6.0e-09 63.9 56 62.5
Sopen10g008680 Solanum pennellii HOM05D009548 ORTHO05D003926 7.8e-09 63.5 39 82.1
Sopen09g011240 Solanum pennellii HOM05D000004 ORTHO05D000034 1.0e-08 63.2 64 54.7
PGSC0003DMG400037955 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.7e-08 62.4 44 72.7
PGSC0003DMG400037751 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.3e-08 62.0 58 60.3
Sopen05g014960 Solanum pennellii HOM05D000014 ORTHO05D000016 3.9e-08 61.2 47 68.1
Sopen11g013250 Solanum pennellii HOM05D000004 ORTHO05D000034 3.9e-08 61.2 49 73.5
Sopen01g013020 Solanum pennellii HOM05D000004 ORTHO05D000034 5.1e-08 60.8 50 62.0
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 5.1e-08 60.8 46 69.6
Sopen11g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-08 60.8 43 74.4
Sopen01g011510 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-07 59.7 57 57.9
PGSC0003DMG400044646 Solanum tuberosum HOM05D008793 ORTHO05D000034 1.1e-07 59.7 39 76.9
Sopen03g013700 Solanum pennellii HOM05D001133 ORTHO05D000034 1.5e-07 59.3 60 56.7
PGSC0003DMG400035576 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.5e-07 59.3 41 75.6
PGSC0003DMG400041168 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.5e-07 58.5 51 62.7
Sopen01g016340 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-07 58.2 44 75.0
Sopen01g024630 Solanum pennellii HOM05D000004 ORTHO05D003926 3.3e-07 58.2 50 58.0
Sopen09g008800 Solanum pennellii HOM05D000004 ORTHO05D000034 3.3e-07 58.2 55 65.5
Sopen11g013650 Solanum pennellii HOM05D000004 ORTHO05D000034 4.3e-07 57.8 39 71.8
Sopen05g009960 Solanum pennellii HOM05D000004 ORTHO05D000034 5.6e-07 57.4 60 53.3
Sopen12g011770 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-07 57.4 47 63.8
Sopen05g017340 Solanum pennellii HOM05D000004 ORTHO05D000034 7.3e-07 57.0 44 68.2
Sopen12g014530 Solanum pennellii HOM05D000004 ORTHO05D000034 7.3e-07 57.0 50 60.0
PGSC0003DMG400046029 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.6e-07 56.6 43 74.4
Sopen03g015640 Solanum pennellii HOM05D000004 ORTHO05D003926 1.2e-06 56.2 47 66.0
Sopen12g019190 Solanum pennellii HOM05D000004 ORTHO05D003926 1.2e-06 56.2 49 61.2
PGSC0003DMG400041274 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.2e-06 56.2 51 62.7
PGSC0003DMG400013191 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.6e-06 55.8 55 60.0
Sopen04g024100 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.5 50 68.0
PGSC0003DMG400046274 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.1e-06 55.5 97 42.3
Sopen03g017580 Solanum pennellii HOM05D000004 ORTHO05D000034 3.6e-06 54.7 42 64.3
Sopen11g012500 Solanum pennellii HOM05D000014 ORTHO05D000016 3.6e-06 54.7 39 71.8
Sopen08g008390 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-06 53.9 45 62.2
Sopen03g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-06 53.5 46 58.7
PGSC0003DMG400034705 Solanum tuberosum HOM05D011937 ORTHO05D000034 8.1e-06 53.5 39 69.2


User provided reference genes

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