Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400040083 Solanum tuberosum HOM05D014661 ORTHO05D018081 6.2e-94 347.4 175 100.0
PGSC0003DMG400010934 Solanum tuberosum HOM05D014661 ORTHO05D018081 1.5e-79 299.7 175 86.9
PGSC0003DMG400010932 Solanum tuberosum HOM05D014661 ORTHO05D018081 2.5e-79 298.9 175 86.9
Sopen01g022350 Solanum pennellii HOM05D014661 ORTHO05D018081 2.0e-76 289.3 172 82.6
PGSC0003DMG400010933 Solanum tuberosum HOM05D014661 ORTHO05D018081 3.4e-55 218.8 129 83.7
PGSC0003DMG400047259 Solanum tuberosum HOM05D014661 ORTHO05D018081 4.1e-53 211.8 175 60.0
PGSC0003DMG400037953 Solanum tuberosum HOM05D014661 ORTHO05D018081 3.8e-51 205.3 175 59.4
Sopen01g022890 Solanum pennellii HOM05D014661 ORTHO05D018081 2.8e-41 172.6 142 59.9
Solyc03g112170.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.1e-16 90.9 155 31.6
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 1.8e-16 90.1 158 32.9
Sopen03g031260 Solanum pennellii HOM05D003146 ORTHO05D001819 4.0e-16 89.0 155 31.0
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 8.9e-16 87.8 156 33.3
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 2.6e-15 86.3 168 32.1
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 9.9e-15 84.3 168 31.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.4e-13 80.5 164 28.0
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 1.4e-13 80.5 178 30.3
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.0e-11 74.3 175 28.0
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-11 73.6 127 30.7
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-11 73.6 127 30.7
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 1.7e-11 73.6 165 32.7
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.3e-11 73.2 169 28.4
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 1.1e-10 70.9 124 30.6
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.5e-10 70.5 122 34.4
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 4.3e-10 68.9 137 29.9
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 5.6e-10 68.6 141 28.4
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 5.6e-10 68.6 141 28.4
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 2.1e-09 66.6 174 30.5
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 2.8e-09 66.2 141 22.7
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 3.6e-09 65.9 137 22.6
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 4.7e-09 65.5 150 27.3
Sabra14G0032000 Salix brachista HOM05D001445 ORTHO05D001261 1.1e-08 64.3 170 27.1
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.4e-08 63.9 129 25.6
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 1.8e-08 63.5 137 22.6
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.8e-08 63.5 124 29.8
Aqoxy5G03637 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 5.2e-08 62.0 152 28.3
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 6.8e-08 61.6 138 27.5
CSS0020469 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 8.9e-08 61.2 124 29.0
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 8.9e-08 61.2 146 26.7
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 8.9e-08 61.2 138 26.1
SHI15103 Sapria himalayana HOM05D003556 ORTHO05D003404 1.5e-07 60.5 137 27.0
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.0e-07 60.1 86 34.9
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 2.0e-07 60.1 134 23.9
MD07G1088700 Malus domestica HOM05D001445 ORTHO05D001261 3.4e-07 59.3 145 27.6
Actinidia30953 Actinidia chinensis HOM05D001445 ORTHO05D001261 4.4e-07 58.9 130 28.5
MD02G1225200 Malus domestica HOM05D001445 ORTHO05D001261 5.8e-07 58.5 167 26.3
THA.LOC104824471 Tarenaya hassleriana HOM05D001445 ORTHO05D001261 5.8e-07 58.5 125 28.0
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 7.6e-07 58.2 138 27.5
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 1.3e-06 57.4 125 29.6
Cfa014665 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.7e-06 57.0 153 29.4
RcHm_v2.0_Chr1g0344001 Rosa chinensis HOM05D001445 ORTHO05D001261 2.2e-06 56.6 161 24.2
C02p47650 Brassica napus HOM05D001445 ORTHO05D001261 2.9e-06 56.2 145 28.3
BolC2t10801H Brassica oleracea HOM05D001445 ORTHO05D001261 2.9e-06 56.2 145 28.3
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 2.9e-06 56.2 103 29.1
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 2.9e-06 56.2 121 27.3
Peaxi162Scf00000g59010 Petunia axillaris HOM05D014661 ORTHO05D018081 2.9e-06 56.2 83 39.8
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.9e-06 56.2 177 25.4
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 3.8e-06 55.8 145 24.8
CDE04G0621 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 3.8e-06 55.8 152 25.0
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 4.9e-06 55.5 121 27.3
Prupe.2G115600 Prunus persica HOM05D001445 ORTHO05D001261 4.9e-06 55.5 145 24.8
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 4.9e-06 55.5 164 24.4
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 6.4e-06 55.1 145 27.6
Cfa014668 Carpinus fangiana HOM05D003556 ORTHO05D003404 6.4e-06 55.1 153 28.8
Cfa006651 Carpinus fangiana HOM05D003556 ORTHO05D003404 8.4e-06 54.7 154 28.6
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 8.4e-06 54.7 134 26.1


User provided reference genes

Program Settings