Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 3.0e-139 498.4 240 100.0
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 2.8e-68 262.7 195 62.6
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 2.8e-68 262.7 195 62.6
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 1.5e-61 240.4 177 62.7
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 9.9e-58 227.6 189 56.6
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.7e-57 226.9 114 97.4
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.2e-56 222.6 173 60.7
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 1.6e-52 210.3 172 57.0
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 4.0e-51 205.7 172 53.5
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.3e-51 205.3 170 58.2
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 5.3e-51 205.3 175 54.3
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 5.3e-51 205.3 175 54.3
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 2.6e-50 203.0 172 53.5
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 4.5e-50 202.2 179 53.1
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.4e-48 197.2 173 54.9
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 3.0e-46 189.5 170 50.0
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 8.7e-46 188.0 174 52.9
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 3.7e-44 182.6 167 54.5
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 3.7e-44 182.6 167 54.5
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-43 179.9 109 81.7
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-42 176.8 231 44.6
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-42 176.8 136 58.8
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.5e-42 175.6 137 62.0
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 7.6e-42 174.9 185 47.6
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.8e-41 172.6 131 61.1
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-40 170.6 172 50.0
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 1.9e-40 170.2 155 49.0
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-39 166.0 143 58.0
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.0e-39 165.2 232 44.4
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 3.3e-37 159.5 134 57.5
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 1.3e-36 157.5 188 48.9
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.8e-35 153.7 128 62.5
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.1e-35 152.9 114 63.2
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 4.5e-34 149.1 188 38.3
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 2.2e-33 146.7 167 38.3
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 9.3e-32 141.4 201 36.8
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 1.2e-31 141.0 169 42.6
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 2.7e-31 139.8 165 43.6
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.8e-30 137.1 201 41.3
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.7e-30 134.8 117 54.7
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 9.7e-29 131.3 128 50.0
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.6e-28 130.6 104 68.3
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 4.8e-28 129.0 110 54.5
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 8.2e-28 128.3 118 52.5
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.1e-27 127.9 65 96.9
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.4e-27 127.5 194 33.0
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 9.0e-27 124.8 110 55.5
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.3e-25 120.9 121 51.2
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 2.2e-25 120.2 117 48.7
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 2.9e-25 119.8 109 53.2
Sopen04g009160 Solanum pennellii HOM05D045494 ORTHO05D026150 1.9e-24 117.1 172 43.6
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 3.2e-24 116.3 174 31.0
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.2e-24 116.3 129 51.2
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 7.2e-24 115.2 147 41.5
Solyc04g018050.1 Solanum lycopersicum HOM05D045494 ORTHO05D026150 7.2e-24 115.2 172 43.0
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-23 114.4 118 51.7
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 2.7e-23 113.2 99 56.6
Solyc05g018860.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.6e-23 112.5 112 52.7
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.6e-23 112.5 94 47.9
CANSAT25G3758 Cannabis sativa HOM05D002907 ORTHO05D005554 7.9e-23 111.7 110 49.1
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 7.9e-23 111.7 122 41.8
Sopen10g024080 Solanum pennellii HOM05D028602 ORTHO05D005554 1.8e-22 110.5 87 63.2
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 3.0e-22 109.8 231 28.6
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 3.0e-22 109.8 195 29.7
Solyc02g014410.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.1e-22 109.0 74 74.3
Sopen10g024140 Solanum pennellii HOM05D028602 ORTHO05D005554 8.7e-22 108.2 87 62.1
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 3.3e-21 106.3 159 35.2
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.3e-21 105.9 167 35.9
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.3e-21 105.9 167 35.9
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 1.3e-20 104.4 102 47.1
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 3.7e-20 102.8 189 29.1
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 6.3e-20 102.1 131 35.9
Nitab4.5_0000051g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.2e-20 101.7 121 43.8
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 1.1e-19 101.3 116 40.5
DCAR_030300 Daucus carota HOM05D002907 ORTHO05D005554 2.4e-19 100.1 124 37.1
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-19 100.1 81 63.0
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 6.9e-19 98.6 77 53.2
DCAR_009226 Daucus carota HOM05D000033 ORTHO05D000913 6.9e-19 98.6 114 40.4
DCAR_015940 Daucus carota HOM05D002907 ORTHO05D005554 1.5e-18 97.4 118 37.3
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 3.4e-18 96.3 171 33.3
Aqoxy7G01297 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 4.5e-18 95.9 175 33.7
Aqoxy7G01312 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 4.5e-18 95.9 175 33.7
Nitab4.5_0000037g0120 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.9e-17 93.2 72 66.7
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 5.0e-17 92.4 193 34.2
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-16 91.3 105 49.5
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.2e-16 89.4 170 30.6
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.5e-16 89.0 62 61.3
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 2.1e-15 87.0 205 28.8
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.7e-15 86.7 182 30.2
TWI60G0328 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 2.7e-15 86.7 170 30.0
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 4.7e-15 85.9 81 53.1
TWI73G0686 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.7e-15 85.9 179 30.2
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 7.9e-15 85.1 162 31.5
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 7.9e-15 85.1 162 31.5
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.0e-14 84.7 189 31.7
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.0e-14 84.7 220 34.5
Aqoxy1G02051 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.4e-14 84.3 181 29.8
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 1.8e-14 84.0 146 32.9
Aqoxy109s001 Aquilegia oxysepala HOM05D000494 ORTHO05D005554 2.3e-14 83.6 182 29.1
Aqoxy4G01036 Aquilegia oxysepala HOM05D000100 ORTHO05D000052 2.3e-14 83.6 205 28.3
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 3.9e-14 82.8 77 53.2
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.9e-14 82.8 74 59.5
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 5.1e-14 82.4 74 55.4
Aqoxy3G02886 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 8.8e-14 81.6 191 32.5
TWI79G1688 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 5.7e-13 79.0 131 32.8
Potri.001G165480 Populus trichocarpa HOM05D018388 ORTHO05D003348 1.3e-12 77.8 169 30.2
Nitab4.5_0005521g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.2e-12 77.0 72 54.2
Aqoxy5G02850 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 2.8e-12 76.6 160 31.9
DCAR_007005 Daucus carota HOM05D002907 ORTHO05D014614 2.8e-12 76.6 176 29.0
PSO447G0118 Papaver somniferum HOM05D002907 ORTHO05D013727 2.8e-12 76.6 173 30.1
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 6.3e-12 75.5 222 26.1
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 2.4e-11 73.6 45 71.1
PSO675G3596 Papaver somniferum HOM05D002907 ORTHO05D013727 2.4e-11 73.6 180 31.1
TWI32G0226 Tripterygium wilfordii HOM05D002907 ORTHO05D003348 6.9e-11 72.0 168 27.4
TWI63G1232 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 9.1e-11 71.6 170 26.5
TWI38G1001 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.5e-10 70.9 167 29.3
Solyc11g044605.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-10 70.5 90 40.0
Sopen05g016270 Solanum pennellii HOM05D004229 ORTHO05D026150 2.6e-10 70.1 54 63.0
Nitab4.5_0000488g0190 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.0e-09 68.2 105 40.0
Thecc.09G096600 Theobroma cacao HOM05D000096 ORTHO05D000045 1.3e-09 67.8 148 28.4
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-09 67.4 175 24.0
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-09 67.4 175 24.0
Thecc.03G185000 Theobroma cacao HOM05D007876 ORTHO05D000065 1.7e-09 67.4 148 29.1
COL.COLO4_26649 Corchorus olitorius HOM05D007876 ORTHO05D007430 2.2e-09 67.0 168 28.0
Thecc.04G155200 Theobroma cacao HOM05D000096 ORTHO05D000045 2.2e-09 67.0 148 29.1
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 2.9e-09 66.6 187 25.1
Carub.0001s3398 Capsella rubella HOM05D000353 ORTHO05D000174 3.8e-09 66.2 214 24.3
DCAR_028338 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-09 66.2 171 24.6
Aqoxy5G02593 Aquilegia oxysepala HOM05D021967 ORTHO05D005554 6.5e-09 65.5 145 24.8
PSO339G4386 Papaver somniferum HOM05D002907 ORTHO05D000065 6.5e-09 65.5 138 25.4
TPR.G15228 Trifolium pratense HOM05D000305 ORTHO05D000065 6.5e-09 65.5 145 24.8
DCAR_032122 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-09 65.1 180 22.8
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.5e-09 65.1 62 54.8
Nitab4.5_0001878g0070 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-08 64.7 148 31.8
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 1.1e-08 64.7 156 26.3
Thecc.04G012000 Theobroma cacao HOM05D000096 ORTHO05D000045 1.4e-08 64.3 148 28.4
PSO063G7297 Papaver somniferum HOM05D017418 ORTHO05D000065 2.5e-08 63.5 159 25.2
TWI36G0416 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 4.2e-08 62.8 145 29.7
Carub.0076s0001 Capsella rubella HOM05D000353 ORTHO05D000174 9.4e-08 61.6 178 24.7
Duzib160G0267 Durio zibethinus HOM05D002907 ORTHO05D000065 9.4e-08 61.6 166 24.7
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 9.4e-08 61.6 124 29.0
Aqoxy6G00840 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 1.2e-07 61.2 176 26.7
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 1.2e-07 61.2 171 23.4
Carub.0016s0007 Capsella rubella HOM05D000353 ORTHO05D000174 1.6e-07 60.8 178 24.2
DCAR_010474 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-07 60.8 172 24.4
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-07 60.1 167 23.4
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 2.7e-07 60.1 95 28.4
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 2.7e-07 60.1 95 28.4
Carub.0006s2622 Capsella rubella HOM05D000353 ORTHO05D000174 3.6e-07 59.7 178 24.2
PSO832G3413 Papaver somniferum HOM05D002907 ORTHO05D013727 3.6e-07 59.7 180 26.7
DCAR_004276 Daucus carota HOM05D002907 ORTHO05D000065 1.0e-06 58.2 239 21.3
COL.COLO4_32842 Corchorus olitorius HOM05D007876 ORTHO05D007430 1.4e-06 57.8 130 25.4
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 3.0e-06 56.6 117 31.6
Carub.0004s0702 Capsella rubella HOM05D000353 ORTHO05D000174 3.0e-06 56.6 178 23.6
PSO801G0386 Papaver somniferum HOM05D002907 ORTHO05D013727 3.0e-06 56.6 181 25.4
PSO801G0439 Papaver somniferum HOM05D002907 ORTHO05D013727 3.0e-06 56.6 181 25.4
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 5.2e-06 55.8 124 27.4
SGA_v2.0_scaffold28G11887 Striga asiatica HOM05D002441 ORTHO05D000174 5.2e-06 55.8 181 26.5
Aqoxy2G00023 Aquilegia oxysepala HOM05D002907 ORTHO05D013727 8.8e-06 55.1 117 29.1


User provided reference genes

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