Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400039552 Solanum tuberosum HOM05D000047 ORTHO05D001383 7.3e-65 250.4 123 100.0
PGSC0003DMG400037395 Solanum tuberosum HOM05D000047 ORTHO05D001383 7.1e-60 233.8 117 97.4
PGSC0003DMG400040496 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.0e-47 191.4 117 82.9
PGSC0003DMG400037468 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.2e-46 189.9 117 82.1
PGSC0003DMG400046074 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.3e-42 176.4 117 78.6
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-29 131.0 121 54.5
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-28 130.2 121 53.7
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-28 129.0 121 53.7
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 7.1e-28 127.5 121 52.9
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-28 127.5 121 52.9
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-28 127.1 121 52.9
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-28 127.1 121 52.9
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-28 127.1 121 52.9
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-28 127.1 121 52.9
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-28 127.1 121 52.9
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-27 126.3 121 52.9
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-27 126.3 119 53.8
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-27 125.9 121 52.1
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-27 125.9 121 52.1
Sopen08g016370 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-27 125.9 122 52.5
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 2.7e-27 125.6 121 52.1
Sopen02g004180 Solanum pennellii HOM05D000047 ORTHO05D001383 2.7e-27 125.6 118 52.5
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-27 125.2 121 52.1
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-27 125.2 121 51.2
PGSC0003DMG400036667 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.5e-27 125.2 87 70.1
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 4.6e-27 124.8 121 52.1
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 7.9e-27 124.0 121 52.9
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 7.9e-27 124.0 121 52.9
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 7.9e-27 124.0 121 52.9
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 7.9e-27 124.0 121 52.9
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-27 124.0 121 51.2
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-26 123.6 121 50.4
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 2.3e-26 122.5 121 52.1
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 2.3e-26 122.5 121 52.1
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 2.3e-26 122.5 121 52.1
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 3.0e-26 122.1 94 61.7
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 5.1e-26 121.3 94 60.6
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 5.1e-26 121.3 121 52.1
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 5.1e-26 121.3 118 51.7
Sopen03g024900 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-26 120.9 121 51.2
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-26 120.9 119 52.1
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-26 120.9 119 51.3
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 8.7e-26 120.6 121 50.4
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 8.7e-26 120.6 121 49.6
Sopen10g006090 Solanum pennellii HOM05D000047 ORTHO05D001383 8.7e-26 120.6 121 50.4
PGSC0003DMG400013969 Solanum tuberosum HOM05D008291 ORTHO05D012653 1.9e-25 119.4 86 67.4
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-25 119.0 113 52.2
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-25 118.6 116 50.0
CAN.G1180.13 Capsicum annuum HOM05D000047 ORTHO05D001383 4.3e-25 118.2 92 62.0
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 4.3e-25 118.2 110 54.5
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 5.7e-25 117.9 98 57.1
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 7.4e-25 117.5 102 55.9
Sopen01g028390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-24 116.7 118 50.0
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-24 116.7 121 47.9
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-24 116.7 96 58.3
Sopen11g022540 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-24 116.3 119 48.7
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 4.8e-24 114.8 121 49.6
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 6.3e-24 114.4 121 47.1
PGSC0003DMG400042901 Solanum tuberosum HOM05D000047 ORTHO05D001383 8.2e-24 114.0 103 57.3
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 1.4e-23 113.2 109 50.5
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.4e-23 112.5 121 47.9
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 3.1e-23 112.1 118 50.0
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 5.3e-23 111.3 103 56.3
Sopen02g008380 Solanum pennellii HOM05D000047 ORTHO05D001383 9.0e-23 110.5 102 54.9
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-22 110.2 106 50.9
PGSC0003DMG400042708 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.2e-22 110.2 114 51.8
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 1.5e-22 109.8 109 50.5
Sopen02g001620 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-21 107.1 106 50.0
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 1.3e-21 106.7 109 49.5
PGSC0003DMG400040056 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.3e-21 106.7 69 79.7
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 2.2e-21 105.9 100 52.0
FvH4_7g04126 Fragaria vesca HOM05D000047 ORTHO05D001383 2.2e-21 105.9 98 53.1
Hund00991 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.2e-21 105.9 82 58.5
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-21 105.5 94 57.4
Hund00874 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.0e-21 104.8 106 49.1
ClCG01G012050 Citrullus lanatus HOM05D000047 ORTHO05D000044 8.5e-21 104.0 119 48.7
Sopen08g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 8.5e-21 104.0 118 47.5
Dinv19964 Davidia involucrata HOM05D000047 ORTHO05D001383 1.1e-20 103.6 103 51.5
Hund24526 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-20 103.6 82 57.3
ClCG09G014410 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.4e-20 103.2 114 49.1
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.4e-20 103.2 78 59.0
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-20 103.2 78 62.8
Hund17824 Selenicereus undatus HOM05D008791 ORTHO05D001383 2.5e-20 102.4 96 51.0
FvH4_3g07261 Fragaria vesca HOM05D000047 ORTHO05D001383 3.2e-20 102.1 100 51.0
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.2e-20 102.1 102 51.0
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.5e-20 101.3 102 52.0
Hund22313 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.2e-19 100.1 82 54.9
Sopen04g015000 Solanum pennellii HOM05D000047 ORTHO05D001383 4.6e-19 98.2 81 60.5
Hund08836 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.1e-19 97.8 118 41.5
Hund04095 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.0e-18 97.1 82 54.9
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.0e-18 97.1 77 55.8
ClCG04G001620 Citrullus lanatus HOM05D000047 ORTHO05D001383 2.3e-18 95.9 114 43.0
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-18 95.1 96 50.0
Hund14969 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.1e-18 94.7 84 51.2
Hund17001 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.1e-18 94.7 82 54.9
Sopen05g014380 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-17 93.6 97 53.6
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.1e-17 93.6 102 44.1
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.1e-17 93.6 102 44.1
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 6.3e-16 87.8 52 82.7
Hund04643 Selenicereus undatus HOM05D000047 ORTHO05D001383 8.2e-16 87.4 102 45.1
Gohir.D04G055325 Gossypium hirsutum HOM05D000047 ORTHO05D001383 1.8e-15 86.3 84 48.8
Hund10081 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.9e-15 84.3 75 50.7
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-15 84.3 105 43.8
Hund02341 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.5e-14 83.2 67 56.7
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 2.0e-14 82.8 105 43.8
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 4.5e-14 81.6 103 44.7
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 7.7e-14 80.9 65 60.0
Sopen09g024340 Solanum pennellii HOM05D000047 ORTHO05D001383 8.5e-13 77.4 49 79.6
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 3.2e-12 75.5 94 43.6
PGSC0003DMG400039242 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.6e-11 73.2 76 48.7
Sopen09g025410 Solanum pennellii HOM05D000047 ORTHO05D001383 2.7e-11 72.4 76 48.7
ClCG07G005810 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.6e-11 72.0 56 57.1
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 6.1e-11 71.2 49 67.3
ClCG08G004400 Citrullus lanatus HOM05D000047 ORTHO05D001383 7.9e-11 70.9 98 41.8
Sopen03g024220 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-10 67.8 49 63.3
Sopen04g012410 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-10 67.8 62 56.5
Hund12310 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-09 67.0 54 55.6
Sopen05g014910 Solanum pennellii HOM05D000047 ORTHO05D010949 5.7e-09 64.7 62 54.8
Hund17818 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.8e-08 62.4 44 63.6
Sopen12g027080 Solanum pennellii HOM05D000047 ORTHO05D012839 3.7e-08 62.0 51 58.8
PGSC0003DMG400037910 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.8e-08 61.6 43 65.1
MBI15_g35001_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 8.2e-08 60.8 77 36.4
Sopen04g021440 Solanum pennellii HOM05D000309 ORTHO05D001383 8.2e-08 60.8 71 42.3
Hund01998 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-07 60.5 46 58.7
ClCG07G003040 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.4e-07 60.1 52 48.1
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 1.8e-07 59.7 47 55.3
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-07 59.7 71 43.7
PGSC0003DMG400045406 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.1e-07 58.5 76 43.4
Sopen03g007040 Solanum pennellii HOM05D000047 ORTHO05D001383 5.3e-07 58.2 71 43.7
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 7.0e-07 57.8 99 32.3
Hund01999 Selenicereus undatus HOM05D000047 ORTHO05D001383 7.0e-07 57.8 47 53.2
CANSAT54G2851 Cannabis sativa HOM05D008471 ORTHO05D002579 9.1e-07 57.4 83 32.5
MBI19_g26465_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 9.1e-07 57.4 76 34.2
TAR626G0941 Trochodendron aralioides HOM05D063036 ORTHO05D001383 1.5e-06 56.6 75 33.3
PGSC0003DMG400035959 Solanum tuberosum HOM05D000047 ORTHO05D001383 2.0e-06 56.2 69 47.8
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 2.6e-06 55.8 44 59.1
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 2.6e-06 55.8 99 28.3
FAN25G3794 Fragaria x ananassa HOM05D002894 ORTHO05D002579 2.6e-06 55.8 106 28.3
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-06 55.8 46 56.5
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 3.4e-06 55.5 66 47.0
FAN23G0867 Fragaria x ananassa HOM05D002894 ORTHO05D002579 4.5e-06 55.1 105 27.6


User provided reference genes

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