Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400039259 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.3e-192 673.7 337 100.0
PGSC0003DMG400041544 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.9e-153 545.0 403 71.7
PGSC0003DMG400041853 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-143 513.5 518 56.2
PGSC0003DMG400046799 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.1e-138 496.1 393 65.9
PGSC0003DMG400034750 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.7e-122 442.6 361 65.1
PGSC0003DMG400042387 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-105 386.3 342 63.7
PGSC0003DMG400042701 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.2e-94 347.8 353 55.5
PGSC0003DMG400047115 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.1e-86 321.6 324 58.3
PGSC0003DMG400042063 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.7e-71 273.9 341 45.7
Sopen10g026280 Solanum pennellii HOM05D003150 ORTHO05D003532 1.5e-67 260.8 257 53.7
PGSC0003DMG400045170 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.3e-67 259.6 239 52.7
PGSC0003DMG400035852 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-66 257.3 206 65.5
PGSC0003DMG400038538 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.4e-65 253.4 412 40.0
PGSC0003DMG400034407 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-63 246.1 317 44.8
PGSC0003DMG400047088 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-61 240.7 334 41.9
PGSC0003DMG400035949 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-59 233.8 287 42.5
PGSC0003DMG400039734 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.8e-58 229.2 271 44.3
PGSC0003DMG400036448 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.2e-58 228.8 278 45.0
PGSC0003DMG400037471 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.9e-57 225.3 139 82.0
PGSC0003DMG400037949 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.9e-55 219.2 265 44.9
PGSC0003DMG400041052 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.2e-54 216.5 279 41.9
Sopen10g009330 Solanum pennellii HOM05D003150 ORTHO05D003532 8.7e-52 208.4 259 43.6
PGSC0003DMG400034761 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.6e-51 204.9 339 35.7
Sopen07g014940 Solanum pennellii HOM05D003150 ORTHO05D003532 1.3e-50 204.5 138 71.0
Sopen09g025550 Solanum pennellii HOM05D003150 ORTHO05D003532 4.1e-49 199.5 141 66.7
PGSC0003DMG400035013 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.5e-48 197.6 226 46.0
PGSC0003DMG400046215 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.5e-46 189.1 207 43.0
PGSC0003DMG400041578 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.3e-44 183.7 171 54.4
PGSC0003DMG400047234 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.1e-44 182.6 235 40.4
PGSC0003DMG400039562 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.7e-44 182.2 382 30.9
PGSC0003DMG400040023 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.5e-43 181.0 262 41.6
PGSC0003DMG400040678 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.3e-43 179.9 250 38.8
PGSC0003DMG400041453 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-42 177.6 250 39.2
PGSC0003DMG400040908 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.3e-42 175.6 227 45.4
PGSC0003DMG400037716 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.2e-42 175.3 181 45.3
PGSC0003DMG400042805 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.2e-42 175.3 235 40.0
PGSC0003DMG400038090 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.0e-41 171.8 251 38.6
PGSC0003DMG400037818 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.7e-40 168.7 330 36.4
PGSC0003DMG400039577 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-39 168.3 201 40.8
PGSC0003DMG400034976 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.9e-39 166.8 205 42.0
PGSC0003DMG400034543 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-38 164.9 404 30.0
PGSC0003DMG400044186 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-38 164.1 246 37.4
PGSC0003DMG400037847 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.2e-38 162.2 205 38.5
Sopen03g009020 Solanum pennellii HOM05D003150 ORTHO05D003532 2.1e-37 160.6 216 42.6
PGSC0003DMG400043679 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.7e-37 160.2 325 32.3
PGSC0003DMG400039545 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.6e-37 159.8 181 40.3
PGSC0003DMG400045642 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-36 158.3 283 32.9
PGSC0003DMG400041530 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.3e-33 146.0 180 39.4
PGSC0003DMG400038274 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-32 144.8 157 42.7
PGSC0003DMG400034945 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.7e-32 142.1 90 84.4
PGSC0003DMG400039928 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-31 141.7 237 35.0
PGSC0003DMG400047132 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.2e-31 140.6 161 42.2
PGSC0003DMG400038519 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-31 139.8 82 81.7
PGSC0003DMG400042345 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-31 139.8 234 36.3
Sopen05g022430 Solanum pennellii HOM05D000014 ORTHO05D003532 5.0e-31 139.4 185 45.9
PGSC0003DMG400035744 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-30 137.5 300 32.3
PGSC0003DMG400038159 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.2e-30 135.6 161 46.6
PGSC0003DMG400040357 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.2e-30 135.6 217 35.9
PGSC0003DMG400037998 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.4e-30 135.2 347 29.4
Sopen04g021750 Solanum pennellii HOM05D003150 ORTHO05D003532 2.7e-29 133.7 149 47.0
PGSC0003DMG400041444 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.1e-29 132.5 179 41.3
Sopen07g019450 Solanum pennellii HOM05D000014 ORTHO05D000016 2.6e-27 127.1 133 48.9
PGSC0003DMG400046979 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.5e-24 116.3 203 31.0
Sopen01g028170 Solanum pennellii HOM05D000014 ORTHO05D000093 2.2e-23 114.0 227 35.7
PGSC0003DMG400040997 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-20 105.1 213 33.8
PGSC0003DMG400036090 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-20 103.6 207 34.8
PGSC0003DMG400043460 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.2e-20 102.8 253 30.0
PGSC0003DMG400045561 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.8e-20 102.1 179 33.0
PGSC0003DMG400045563 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-19 101.7 99 49.5
PGSC0003DMG400042690 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.5e-19 101.3 187 39.0
PGSC0003DMG400034704 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.0e-19 100.9 127 44.9
PGSC0003DMG400046130 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.6e-19 100.5 203 30.5
PGSC0003DMG400036307 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.7e-19 99.4 162 34.6
PGSC0003DMG400035280 Solanum tuberosum HOM05D043514 ORTHO05D003532 7.5e-19 99.0 60 80.0
PGSC0003DMG400037630 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-18 98.2 80 55.0
PGSC0003DMG400037804 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.7e-18 97.8 61 80.3
PGSC0003DMG400043631 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.2e-18 97.4 156 35.9
PGSC0003DMG400034683 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.7e-18 96.7 187 31.0
PGSC0003DMG400038726 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.7e-18 96.7 322 28.0
CAN.G47.17 Capsicum annuum HOM05D003150 ORTHO05D003532 6.3e-18 95.9 118 43.2
PGSC0003DMG400044245 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.2e-18 95.5 134 35.8
CAN.G1215.7 Capsicum annuum HOM05D003150 ORTHO05D003532 1.1e-17 95.1 108 38.9
PGSC0003DMG400044226 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.8e-17 94.4 335 26.6
PGSC0003DMG400045493 Solanum tuberosum HOM05D003150 ORTHO05D003532 7.0e-17 92.4 136 38.2
PGSC0003DMG400035954 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-16 91.7 108 37.0
Sopen06g012880 Solanum pennellii HOM05D003150 ORTHO05D003532 2.0e-16 90.9 113 41.6
CAN.G721.1 Capsicum annuum HOM05D003150 ORTHO05D003532 7.7e-16 89.0 113 39.8
Sopen04g018650 Solanum pennellii HOM05D003150 ORTHO05D003532 1.0e-15 88.6 77 50.6
PGSC0003DMG400041144 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-15 88.2 262 27.5
Sopen11g019680 Solanum pennellii HOM05D003150 ORTHO05D003532 6.5e-15 85.9 110 50.0
PGSC0003DMG400039721 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.5e-14 84.0 89 51.7
Sopen08g011960 Solanum pennellii HOM05D000014 ORTHO05D000016 5.5e-14 82.8 54 75.9
MSTRG.11524 Avicennia marina HOM05D000247 ORTHO05D003114 6.1e-13 79.3 174 29.9
PGSC0003DMG400035349 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.1e-13 79.3 69 50.7
Nitab4.5_0001204g0060 Nicotiana tabacum HOM05D008707 ORTHO05D014667 8.0e-13 79.0 181 29.3
PGSC0003DMG400047275 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.0e-12 78.6 181 28.7
PGSC0003DMG400041191 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.0e-12 77.0 73 49.3
Sopen00g009940 Solanum pennellii HOM05D003150 ORTHO05D003532 5.2e-12 76.3 147 35.4
PGSC0003DMG400026773 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.2e-12 76.3 97 40.2
PGSC0003DMG400043349 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.2e-12 76.3 78 53.8
Sopen12g020580 Solanum pennellii HOM05D003150 ORTHO05D003532 1.2e-11 75.1 262 24.8
PGSC0003DMG400045706 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.6e-11 73.9 81 46.9
PGSC0003DMG400046967 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.6e-11 73.9 82 47.6
PGSC0003DMG400017909 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.2e-10 70.9 55 58.2
PGSC0003DMG400046250 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.8e-10 70.5 283 25.8
Sopen09g011670 Solanum pennellii HOM05D003150 ORTHO05D003532 3.7e-10 70.1 166 29.5
PGSC0003DMG400038112 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-09 68.2 52 59.6
PGSC0003DMG400044792 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-09 68.2 69 49.3
PGSC0003DMG400035450 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.4e-09 67.4 57 50.9
Nitab4.5_0004673g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 3.1e-09 67.0 162 27.8
SHI06343 Sapria himalayana HOM05D000014 ORTHO05D000093 3.1e-09 67.0 176 26.1
PGSC0003DMG400039427 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.1e-09 67.0 162 29.0
PGSC0003DMG400041070 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.1e-09 67.0 82 45.1
PGSC0003DMG400035314 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.1e-09 66.6 66 43.9
PGSC0003DMG400039669 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.1e-09 66.6 57 56.1
PGSC0003DMG400043480 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.1e-09 65.5 81 42.0
ECA247G3092 Erigeron canadensis HOM05D007234 ORTHO05D008488 1.2e-08 65.1 244 26.2
Nitab4.5_0008137g0070 Nicotiana tabacum HOM05D011204 ORTHO05D011566 2.7e-08 63.9 151 27.8
PGSC0003DMG400023047 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-08 63.5 229 25.8
PGSC0003DMG400034525 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-08 63.5 78 43.6
PGSC0003DMG400045228 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-08 63.5 85 42.4
PGSC0003DMG400038184 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.9e-08 62.8 47 68.1
PGSC0003DMG400038808 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-07 61.6 57 50.9
PGSC0003DMG400043456 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.3e-07 61.6 85 44.7
Sopen11g022700 Solanum pennellii HOM05D003150 ORTHO05D003532 1.7e-07 61.2 107 35.5
PGSC0003DMG400039726 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.8e-07 60.1 83 41.0
Ca_19825_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.0e-07 59.7 146 30.8
Sopen07g020680 Solanum pennellii HOM05D003150 ORTHO05D003532 5.0e-07 59.7 154 30.5
PGSC0003DMG400044687 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-07 59.7 65 43.1
Sopen01g022170 Solanum pennellii HOM05D003150 ORTHO05D003532 6.5e-07 59.3 53 54.7
PGSC0003DMG400035217 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-07 59.3 85 42.4
PGSC0003DMG400045008 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-07 59.3 112 37.5
Oeu019659.1 Olea europaea HOM05D007234 ORTHO05D008488 8.5e-07 58.9 197 24.4
CsaV3_6G014490 Cucumis sativus L. HOM05D007234 ORTHO05D008488 1.1e-06 58.5 179 27.4
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 1.5e-06 58.2 186 24.2
Ca_05501_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-06 58.2 151 29.8
MELO3C021476.2 Cucumis melo HOM05D007234 ORTHO05D008488 1.5e-06 58.2 177 28.2
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 1.9e-06 57.8 174 24.1
PGSC0003DMG400045795 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-06 57.8 49 49.0
arahy.Tifrunner.gnm1.ann1.3BTZ55 Arachis hypogaea HOM05D015149 ORTHO05D003532 2.5e-06 57.4 182 26.4
PGSC0003DMG400027715 Solanum tuberosum HOM05D044798 ORTHO05D051316 2.5e-06 57.4 52 50.0
Ca_14684_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.2e-06 56.6 150 30.7
Nitab4.5_0008383g0010 Nicotiana tabacum HOM05D008707 ORTHO05D014667 4.2e-06 56.6 59 44.1
Sopen03g013540 Solanum pennellii HOM05D000014 ORTHO05D000093 4.2e-06 56.6 37 83.8
CiPaw.07G132700 Carya illinoinensis HOM05D009249 ORTHO05D002074 7.2e-06 55.8 140 27.9
Ca_22864_v3 Cicer arietinum L. HOM05D026577 ORTHO05D008488 7.2e-06 55.8 146 26.7
Ca_27133_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.2e-06 55.8 153 28.1
Ca_27869_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.5e-06 55.5 152 31.6
PGSC0003DMG400037930 Solanum tuberosum HOM05D003150 ORTHO05D003532 9.5e-06 55.5 56 48.2


User provided reference genes

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