Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-74 282.7 160 100.0
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.5e-49 197.2 154 79.2
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 4.7e-48 194.9 160 68.8
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-45 184.9 128 85.2
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-43 179.1 153 67.3
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-42 176.8 154 68.2
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-40 170.2 163 65.6
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-40 168.7 127 85.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 9.0e-39 164.1 146 55.5
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-39 164.1 154 68.8
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-38 162.5 129 81.4
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-37 159.8 129 78.3
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-36 156.4 160 64.4
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.2e-36 155.6 108 74.1
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 6.0e-35 151.4 120 80.0
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-34 149.8 84 88.1
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-34 149.1 129 75.2
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-34 148.7 132 61.4
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-33 147.1 115 69.6
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-33 146.0 129 75.2
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-32 142.1 115 81.7
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-31 140.2 104 66.3
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-31 140.2 111 79.3
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.8e-31 139.8 131 71.0
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-31 139.4 115 67.8
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.6e-30 134.4 115 64.3
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-30 134.4 116 81.0
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-30 134.0 99 60.6
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-29 132.5 114 78.9
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.9e-28 129.8 126 55.6
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-28 129.4 122 59.8
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-28 128.3 130 62.3
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 2.1e-27 126.3 84 75.0
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-27 124.8 108 79.6
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-27 124.8 129 62.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-26 121.7 99 59.6
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 6.7e-26 121.3 84 69.0
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 8.7e-26 120.9 115 60.9
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.5e-25 119.4 115 58.3
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-24 117.1 75 76.0
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-24 115.9 120 55.0
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-24 115.9 106 62.3
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-24 115.5 104 78.8
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 6.2e-24 114.8 65 83.1
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-23 112.8 120 66.7
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-23 112.8 116 50.9
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 3.1e-23 112.5 126 54.0
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 6.9e-23 111.3 100 53.0
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-22 109.8 83 61.4
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 3.4e-22 109.0 85 60.0
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-21 107.1 87 54.0
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-21 106.7 118 44.9
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.4e-21 104.8 77 61.0
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.3e-20 100.9 90 82.2
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-19 100.1 98 57.1
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-19 99.4 87 79.3
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.0e-19 98.2 89 55.1
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 7.9e-19 97.8 69 65.2
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-18 97.4 60 78.3
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.0e-18 95.9 68 69.1
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-17 93.2 61 75.4
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.4e-17 91.3 83 53.0
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.2e-16 87.8 76 61.8
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.3e-15 85.1 138 47.1
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.0e-15 84.3 103 39.8
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 2.6e-14 82.8 102 43.1
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.0e-13 80.9 135 31.9
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.3e-13 80.5 102 42.2
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-13 80.1 66 51.5
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 2.2e-13 79.7 87 48.3
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-13 79.7 76 47.4
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.9e-13 79.3 99 38.4
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.9e-13 78.6 95 44.2
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 8.4e-13 77.8 132 29.5
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-13 77.8 75 46.7
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-12 77.4 72 51.4
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.4e-12 77.0 99 38.4
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-12 77.0 62 51.6
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-12 77.0 66 54.5
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-12 76.3 76 47.4
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 4.2e-12 75.5 99 37.4
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.3e-12 74.3 79 44.3
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-11 73.6 61 49.2
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.7e-11 72.8 72 51.4
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-11 71.2 72 45.8
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-10 69.7 152 30.9
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.3e-10 69.7 101 35.6
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-10 69.7 56 51.8
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.1e-10 68.6 89 37.1
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.1e-10 68.6 66 47.0
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.1e-09 67.4 41 78.0
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 3.3e-09 65.9 61 49.2
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 9.7e-09 64.3 104 29.8
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.3e-08 61.6 35 77.1
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.1e-07 59.3 85 37.6
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-07 58.5 64 42.2
Solyc09g031960.1 Solanum lycopersicum HOM05D003888 ORTHO05D391351 6.9e-07 58.2 27 92.6
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.2e-06 57.4 134 26.9
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 2.0e-06 56.6 136 30.9
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.4e-06 55.8 67 38.8
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.1 97 27.8
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.9e-06 55.1 65 36.9
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.7 67 38.8
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 7.7e-06 54.7 70 37.1


User provided reference genes

Program Settings