Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038922 Solanum tuberosum HOM05D008221 ORTHO05D011984 8.2e-117 423.7 208 100.0
PGSC0003DMG400036612 Solanum tuberosum HOM05D008221 ORTHO05D011984 2.9e-90 335.5 201 83.6
PGSC0003DMG400044944 Solanum tuberosum HOM05D008221 ORTHO05D011984 3.9e-87 325.1 205 79.5
PGSC0003DMG400019230 Solanum tuberosum HOM05D008221 ORTHO05D011984 3.7e-85 318.5 205 78.0
Solyc07g063980.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 6.8e-71 271.2 205 68.3
Sopen07g032120 Solanum pennellii HOM05D008221 ORTHO05D011984 1.9e-65 253.1 205 65.9
PGSC0003DMG400043085 Solanum tuberosum HOM05D008221 ORTHO05D011984 5.6e-57 224.9 125 86.4
PGSC0003DMG400040495 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.6e-56 223.4 215 60.5
PGSC0003DMG400047240 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.7e-53 213.4 223 57.4
PGSC0003DMG400037880 Solanum tuberosum HOM05D008221 ORTHO05D011984 2.4e-52 209.5 122 82.8
PGSC0003DMG400044046 Solanum tuberosum HOM05D008221 ORTHO05D011984 9.2e-52 207.6 225 56.4
Solyc07g063990.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 3.0e-50 202.6 187 61.0
Sopen07g032130 Solanum pennellii HOM05D008221 ORTHO05D011984 8.6e-50 201.1 187 61.5
Sopen05g014840 Solanum pennellii HOM05D008221 ORTHO05D011984 1.2e-48 197.2 219 55.3
CAN.G162.145 Capsicum annuum HOM05D008221 ORTHO05D011984 1.8e-47 193.4 178 58.4
CAN.G162.151 Capsicum annuum HOM05D008221 ORTHO05D011984 2.4e-44 183.0 158 58.9
CAN.G162.152 Capsicum annuum HOM05D008221 ORTHO05D011984 9.9e-38 161.0 160 53.8
CAN.G949.6 Capsicum annuum HOM05D008221 ORTHO05D011984 8.3e-37 157.9 143 56.6
Nitab4.5_0002238g0020 Nicotiana tabacum HOM05D008221 ORTHO05D011984 2.4e-36 156.4 197 49.7
CAN.G456.9 Capsicum annuum HOM05D008221 ORTHO05D011984 5.1e-34 148.7 145 55.9
Sopen05g014450 Solanum pennellii HOM05D008221 ORTHO05D011984 2.0e-30 136.7 130 56.9
PGSC0003DMG400034432 Solanum tuberosum HOM05D008221 ORTHO05D011984 2.9e-29 132.9 130 56.9
CAN.G162.149 Capsicum annuum HOM05D008221 ORTHO05D011984 3.0e-26 122.9 100 60.0
Peaxi162Scf01086g00008 Petunia axillaris HOM05D008221 ORTHO05D011984 2.4e-23 113.2 239 37.2
Solyc05g018030.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 8.4e-21 104.8 108 55.6
Nitab4.5_0000552g0010 Nicotiana tabacum HOM05D008221 ORTHO05D011984 1.9e-20 103.6 94 59.6
CAN.G337.167 Capsicum annuum HOM05D008221 ORTHO05D115420 7.8e-19 98.2 141 39.0
CAN.G337.161 Capsicum annuum HOM05D008221 ORTHO05D114940 1.1e-17 94.4 141 37.6
Nitab4.5_0002238g0050 Nicotiana tabacum HOM05D008221 ORTHO05D011890 2.5e-17 93.2 152 41.4
Peaxi162Scf00459g00810 Petunia axillaris HOM05D008221 ORTHO05D011890 4.3e-17 92.4 142 39.4
Peaxi162Scf01086g00036 Petunia axillaris HOM05D008221 ORTHO05D011890 6.2e-16 88.6 123 41.5
PGSC0003DMG400035631 Solanum tuberosum HOM05D008221 ORTHO05D397769 6.4e-13 78.6 102 40.2
Peaxi162Scf00308g00113 Petunia axillaris HOM05D008221 ORTHO05D011890 3.9e-10 69.3 93 40.9
Peaxi162Scf00303g00111 Petunia axillaris HOM05D008221 ORTHO05D011890 5.1e-10 68.9 93 38.7
Peaxi162Scf00494g00613 Petunia axillaris HOM05D008221 ORTHO05D011890 5.1e-10 68.9 123 38.2
Peaxi162Scf04031g00002 Petunia axillaris HOM05D008221 ORTHO05D011890 6.7e-10 68.6 124 38.7
PGSC0003DMG400040419 Solanum tuberosum HOM05D008221 ORTHO05D011890 6.7e-10 68.6 172 30.8
PGSC0003DMG400045683 Solanum tuberosum HOM05D008221 ORTHO05D010882 6.7e-10 68.6 131 35.9
Peaxi162Scf00363g00084 Petunia axillaris HOM05D008221 ORTHO05D011890 1.9e-09 67.0 93 38.7
Sopen07g031950 Solanum pennellii HOM05D008221 ORTHO05D011890 1.9e-09 67.0 177 32.2
PGSC0003DMG400041033 Solanum tuberosum HOM05D008221 ORTHO05D037682 2.5e-09 66.6 105 39.0
Peaxi162Scf00886g00026 Petunia axillaris HOM05D008221 ORTHO05D011890 7.4e-09 65.1 92 39.1
Solyc07g064000.1 Solanum lycopersicum HOM05D008221 ORTHO05D037682 7.4e-09 65.1 104 38.5
CAN.G337.166 Capsicum annuum HOM05D008221 ORTHO05D011890 1.3e-08 64.3 133 34.6
Peaxi162Scf00151g00052 Petunia axillaris HOM05D008221 ORTHO05D011890 1.3e-08 64.3 92 37.0
Sopen07g032140 Solanum pennellii HOM05D008221 ORTHO05D037682 1.6e-08 63.9 105 37.1
Solyc07g063840.1 Solanum lycopersicum HOM05D008221 ORTHO05D011890 6.2e-08 62.0 87 40.2
Peaxi162Scf00609g00622 Petunia axillaris HOM05D008221 ORTHO05D011890 2.4e-07 60.1 104 34.6
CAN.G162.156 Capsicum annuum HOM05D008221 ORTHO05D011890 4.0e-07 59.3 86 38.4
CAN.G337.159 Capsicum annuum HOM05D008221 ORTHO05D011890 4.0e-07 59.3 86 38.4
PGSC0003DMG400046459 Solanum tuberosum HOM05D008221 ORTHO05D011890 4.0e-07 59.3 90 37.8


User provided reference genes

Program Settings