Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.1e-96 354.8 185 100.0
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.2e-80 302.0 218 78.0
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.7e-65 253.1 174 78.7
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-63 246.9 184 75.0
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.3e-60 236.9 144 86.8
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.7e-57 226.5 144 84.0
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 3.5e-55 218.8 147 80.3
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.3e-54 216.9 137 84.7
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 6.7e-54 214.5 183 68.9
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 1.9e-53 213.0 188 66.0
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-52 209.9 130 87.7
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 2.1e-47 193.0 188 62.8
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-43 179.5 181 55.2
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.1e-43 177.6 192 54.7
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-41 174.1 182 53.8
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-40 170.6 169 54.4
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.2e-40 168.7 169 56.2
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.5e-40 168.3 159 64.2
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-39 166.4 162 55.6
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-39 166.0 182 52.2
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-38 163.7 158 57.0
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.8e-36 156.0 163 52.8
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.8e-36 156.0 159 54.7
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-36 154.5 165 52.1
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-35 153.7 150 54.0
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.4e-35 152.9 109 79.8
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 4.1e-35 152.1 100 84.0
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-34 149.4 155 51.6
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-34 149.4 147 53.7
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 2.9e-33 146.0 156 60.3
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.5e-33 144.4 144 54.9
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-32 142.9 146 54.1
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.4e-32 141.0 164 48.2
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-31 140.6 144 52.8
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-31 140.2 164 49.4
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.7e-31 138.7 169 47.3
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-29 132.5 155 47.7
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-29 132.1 155 47.7
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 7.4e-29 131.3 174 41.4
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 7.4e-29 131.3 180 45.6
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 9.7e-29 131.0 174 41.4
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-28 129.8 165 49.7
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 2.2e-28 129.8 180 46.1
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 3.7e-28 129.0 180 45.0
Sopen12g019440 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-28 128.6 90 75.6
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-27 126.7 140 52.9
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-26 124.0 122 55.7
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-26 123.6 169 44.4
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 4.5e-26 122.1 181 44.8
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.9e-26 121.7 112 58.0
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.9e-26 121.7 143 51.0
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-25 120.9 112 56.2
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-25 120.9 143 49.0
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-25 120.6 112 57.1
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-25 120.6 158 41.1
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-25 120.2 112 55.4
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.9e-24 116.7 172 41.9
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-24 115.9 169 43.2
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.2e-24 114.8 171 42.1
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.4e-24 114.4 105 58.1
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.4e-24 114.4 159 44.7
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-23 112.5 154 43.5
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.6e-23 112.5 172 42.4
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-22 110.5 177 40.7
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 1.8e-22 110.2 167 40.7
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 1.8e-22 110.2 177 40.7
Sopen09g010940 Solanum pennellii HOM05D003617 ORTHO05D007165 4.0e-22 109.0 80 70.0
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.5e-21 104.8 127 55.1
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.7e-21 104.4 109 55.0
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 3.1e-19 99.4 165 40.6
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.1e-19 97.8 94 56.4
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-18 95.9 127 46.5
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 4.5e-18 95.5 117 49.6
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-17 94.0 107 41.1
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-17 93.6 117 47.9
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.5e-17 91.3 147 42.2
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.1e-16 90.9 107 49.5
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-16 89.7 80 57.5
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.5e-16 89.7 183 36.6
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 3.2e-16 89.4 116 49.1
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.2e-16 89.4 123 43.1
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 7.2e-16 88.2 171 36.3
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.0e-14 82.4 72 59.7
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-13 79.7 169 33.7
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 5.7e-13 78.6 172 36.6
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.5e-13 78.2 68 57.4
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.7e-12 75.9 123 38.2
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-11 72.8 67 55.2
Solyc07g041360.1 Solanum lycopersicum HOM05D003617 ORTHO05D007165 5.4e-11 72.0 109 40.4
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 9.1e-11 71.2 164 34.1
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-10 70.9 60 55.0
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-10 70.5 78 51.3
PGSC0003DMG400034694 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-10 70.5 134 33.6
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-10 70.1 96 44.8
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-09 67.0 105 39.0
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-09 66.2 133 36.1
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.8e-09 65.9 58 56.9
PGSC0003DMG400036438 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.0e-09 65.5 97 36.1
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.2e-08 61.6 68 51.5
CAN.G1451.2 Capsicum annuum HOM05D003617 ORTHO05D007165 2.8e-07 59.7 104 40.4
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.8e-07 59.7 50 62.0
Nitab4.5_0003624g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-07 59.3 78 44.9
CAN.G810.1 Capsicum annuum HOM05D003617 ORTHO05D007165 8.0e-07 58.2 110 35.5
CAN.G495.5 Capsicum annuum HOM05D003617 ORTHO05D007165 8.8e-06 54.7 82 35.4


User provided reference genes

Program Settings