Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038736 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-43 179.5 90 100.0
PGSC0003DMG400037408 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.1e-31 137.5 99 74.7
PGSC0003DMG400045079 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.1e-22 109.8 72 79.2
Sopen06g010950 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-20 102.4 80 65.0
PGSC0003DMG400035604 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.0e-20 101.3 58 89.7
PGSC0003DMG400030756 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.8e-19 97.4 58 84.5
PGSC0003DMG400040356 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.8e-19 97.4 59 84.7
Sopen08g017680 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-19 96.7 58 86.2
PGSC0003DMG400038749 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.9e-19 96.7 55 85.5
PGSC0003DMG400035041 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.7e-18 95.9 55 89.1
PGSC0003DMG400047047 Solanum tuberosum HOM05D006181 ORTHO05D008560 2.2e-18 95.5 57 82.5
PGSC0003DMG400037281 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.9e-18 95.1 57 86.0
PGSC0003DMG400046682 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.8e-18 94.7 55 83.6
Sopen04g018540 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-17 93.2 55 81.8
PGSC0003DMG400035219 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.4e-17 92.8 64 73.4
PGSC0003DMG400042962 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.2e-17 91.7 63 74.6
Sopen10g014560 Solanum pennellii HOM05D000004 ORTHO05D000034 4.2e-17 91.3 55 78.2
Sopen02g010460 Solanum pennellii HOM05D000004 ORTHO05D003926 7.1e-17 90.5 55 76.4
Sopen11g011940 Solanum pennellii HOM05D000004 ORTHO05D000034 7.1e-17 90.5 55 83.6
Sopen01g021260 Solanum pennellii HOM05D000004 ORTHO05D000034 9.2e-17 90.1 55 83.6
PGSC0003DMG400043807 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.2e-16 89.7 52 88.5
PGSC0003DMG400047335 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-16 89.7 55 81.8
PGSC0003DMG400034641 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.7e-16 88.6 62 69.4
Sopen03g019270 Solanum pennellii HOM05D000004 ORTHO05D000034 3.5e-16 88.2 55 80.0
PGSC0003DMG400039765 Solanum tuberosum HOM05D000004 ORTHO05D003926 3.5e-16 88.2 55 80.0
PGSC0003DMG400040912 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.5e-16 88.2 54 79.6
Sopen04g020600 Solanum pennellii HOM05D000004 ORTHO05D000034 4.6e-16 87.8 55 83.6
PGSC0003DMG400041196 Solanum tuberosum HOM05D006181 ORTHO05D000034 7.8e-16 87.0 57 80.7
Sopen01g026010 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-15 86.7 55 78.2
Sopen04g015410 Solanum pennellii HOM05D000004 ORTHO05D000034 1.0e-15 86.7 55 81.8
Sopen08g018840 Solanum pennellii HOM05D000004 ORTHO05D000034 1.0e-15 86.7 55 74.5
PGSC0003DMG400044926 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.0e-15 86.7 89 55.1
Sopen00g007670 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-15 86.3 52 84.6
Sopen09g024020 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-15 86.3 52 84.6
PGSC0003DMG400045687 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.3e-15 86.3 56 76.8
Sopen05g014060 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-15 85.9 54 79.6
PGSC0003DMG400034451 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.7e-15 85.9 50 86.0
PGSC0003DMG400045438 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.7e-15 85.9 55 83.6
Sopen07g007270 Solanum pennellii HOM05D000004 ORTHO05D000034 2.3e-15 85.5 52 84.6
PGSC0003DMG400034941 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.3e-15 85.5 57 73.7
Sopen11g020920 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-15 85.1 58 75.9
PGSC0003DMG400041900 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.9e-15 84.7 55 80.0
Sopen12g024600 Solanum pennellii HOM05D000004 ORTHO05D000034 5.1e-15 84.3 55 80.0
Sopen03g021240 Solanum pennellii HOM05D000014 ORTHO05D000016 6.6e-15 84.0 50 88.0
Sopen04g011870 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-15 84.0 55 80.0
Sopen12g017310 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-15 84.0 55 76.4
Sopen07g007150 Solanum pennellii HOM05D000004 ORTHO05D000034 8.7e-15 83.6 55 74.5
Sopen11g019870 Solanum pennellii HOM05D000004 ORTHO05D000034 8.7e-15 83.6 55 76.4
Sopen07g008620 Solanum pennellii HOM05D000004 ORTHO05D000034 1.1e-14 83.2 55 74.5
Sopen11g019920 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-14 83.2 58 72.4
PGSC0003DMG400009680 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.1e-14 83.2 57 78.9
Sopen04g015350 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-14 82.8 55 80.0
Sopen04g015450 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-14 82.8 58 75.9
Sopen02g009670 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-14 82.4 52 76.9
Sopen05g011460 Solanum pennellii HOM05D000004 ORTHO05D000034 1.9e-14 82.4 55 72.7
PGSC0003DMG400035997 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.9e-14 82.4 59 71.2
Sopen07g013210 Solanum pennellii HOM05D000004 ORTHO05D003926 2.5e-14 82.0 55 76.4
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 3.3e-14 81.6 58 69.0
Sopen01g013230 Solanum pennellii HOM05D000004 ORTHO05D000034 3.3e-14 81.6 61 67.2
PGSC0003DMG400045926 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.3e-14 81.6 52 80.8
Sopen04g024080 Solanum pennellii HOM05D000004 ORTHO05D000034 4.3e-14 81.3 55 78.2
Sopen09g021060 Solanum pennellii HOM05D000004 ORTHO05D000034 4.3e-14 81.3 55 78.2
PGSC0003DMG400044773 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.3e-14 81.3 59 71.2
PGSC0003DMG400046629 Solanum tuberosum HOM05D015884 ORTHO05D000034 4.3e-14 81.3 57 75.4
Sopen05g027020 Solanum pennellii HOM05D000002 ORTHO05D002065 5.6e-14 80.9 64 70.3
Sopen12g017980 Solanum pennellii HOM05D031357 ORTHO05D000034 5.6e-14 80.9 54 77.8
Sopen04g018590 Solanum pennellii HOM05D000004 ORTHO05D000034 9.6e-14 80.1 55 72.7
Sopen04g020570 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-13 79.7 58 65.5
Sopen12g012760 Solanum pennellii HOM05D000004 ORTHO05D000034 1.6e-13 79.3 47 83.0
Sopen07g008310 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-13 79.0 55 72.7
Sopen07g021040 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-13 79.0 55 74.5
PGSC0003DMG400046603 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.1e-13 79.0 49 81.6
Sopen07g017860 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-13 78.6 55 72.7
Sopen10g007550 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-13 78.6 54 75.9
Sopen07g015720 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-13 78.2 54 77.8
Sopen12g012740 Solanum pennellii HOM05D000004 ORTHO05D000034 3.6e-13 78.2 52 73.1
Sopen12g024760 Solanum pennellii HOM05D000004 ORTHO05D000034 3.6e-13 78.2 47 78.7
PGSC0003DMG400038788 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.6e-13 78.2 58 70.7
Sopen03g011250 Solanum pennellii HOM05D000004 ORTHO05D003926 4.7e-13 77.8 54 75.9
Sopen04g019800 Solanum pennellii HOM05D000004 ORTHO05D000034 4.7e-13 77.8 55 67.3
Sopen07g005880 Solanum pennellii HOM05D000004 ORTHO05D003926 4.7e-13 77.8 55 72.7
PGSC0003DMG400035149 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.7e-13 77.8 53 75.5
PGSC0003DMG400044540 Solanum tuberosum HOM05D015884 ORTHO05D000034 4.7e-13 77.8 71 59.2
Sopen01g007140 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-13 77.4 58 63.8
Sopen01g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-13 77.4 55 74.5
Sopen03g012640 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-13 77.4 50 80.0
Sopen05g022820 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-13 77.4 55 70.9
PGSC0003DMG400010854 Solanum tuberosum HOM05D000004 ORTHO05D000034 6.2e-13 77.4 57 75.4
Sopen07g008570 Solanum pennellii HOM05D000004 ORTHO05D000034 8.1e-13 77.0 55 69.1
Sopen11g014260 Solanum pennellii HOM05D000014 ORTHO05D000093 8.1e-13 77.0 52 73.1
Sopen12g012640 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-13 77.0 53 73.6
Sopen07g019380 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-12 76.6 45 84.4
Sopen11g019900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-12 76.6 69 60.9
Sopen04g020070 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-12 76.3 47 80.9
Sopen01g007260 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-12 75.9 57 66.7
Sopen02g003160 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 75.9 54 74.1
Sopen09g013730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 75.9 53 69.8
Sopen01g007250 Solanum pennellii HOM05D000004 ORTHO05D000034 2.4e-12 75.5 66 60.6
Sopen05g016300 Solanum pennellii HOM05D000004 ORTHO05D000034 3.1e-12 75.1 52 75.0
Sopen12g017190 Solanum pennellii HOM05D000004 ORTHO05D000034 3.1e-12 75.1 55 72.7
Sopen07g018540 Solanum pennellii HOM05D000004 ORTHO05D000034 4.0e-12 74.7 57 68.4
PGSC0003DMG400037849 Solanum tuberosum HOM05D000004 ORTHO05D000034 5.3e-12 74.3 57 68.4
Sopen01g011510 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 73.9 52 71.2
Sopen10g017890 Solanum pennellii HOM05D000004 ORTHO05D000034 9.0e-12 73.6 55 69.1
PGSC0003DMG400037751 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.0e-12 73.6 60 65.0
PGSC0003DMG400046383 Solanum tuberosum HOM05D000004 ORTHO05D003926 9.0e-12 73.6 44 81.8
Sopen04g015420 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.2 42 83.3
Sopen10g015100 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-11 73.2 50 78.0
Sopen04g011730 Solanum pennellii HOM05D000014 ORTHO05D000093 1.5e-11 72.8 56 67.9
PGSC0003DMG400035576 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.5e-11 72.8 41 87.8
Sopen01g021240 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-11 72.4 55 67.3
Sopen02g010850 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-11 72.4 49 77.6
Sopen03g015760 Solanum pennellii HOM05D000004 ORTHO05D000034 2.0e-11 72.4 55 67.3
Sopen12g016730 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-11 72.4 54 72.2
Sopen05g016490 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-11 72.0 52 75.0
Sopen03g014710 Solanum pennellii HOM05D000004 ORTHO05D000034 3.4e-11 71.6 51 70.6
Sopen10g007520 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-11 71.6 78 51.3
Sopen01g010950 Solanum pennellii HOM05D000004 ORTHO05D003926 4.4e-11 71.2 52 71.2
Sopen09g011240 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-11 70.9 67 58.2
PGSC0003DMG400040330 Solanum tuberosum HOM05D000004 ORTHO05D003926 5.8e-11 70.9 49 77.6
Sopen03g017110 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-11 70.5 49 69.4
Sopen05g014960 Solanum pennellii HOM05D000014 ORTHO05D000016 7.6e-11 70.5 50 72.0
Sopen08g018290 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-11 70.1 57 64.9
Sopen11g010620 Solanum pennellii HOM05D000004 ORTHO05D000034 9.9e-11 70.1 55 69.1
Sopen12g019190 Solanum pennellii HOM05D000004 ORTHO05D003926 9.9e-11 70.1 49 71.4
Sopen11g013250 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-10 69.7 49 75.5
Sopen01g024630 Solanum pennellii HOM05D000004 ORTHO05D003926 3.8e-10 68.2 76 48.7
Sopen08g012050 Solanum pennellii HOM05D002038 ORTHO05D002165 3.8e-10 68.2 44 79.5
PGSC0003DMG400044646 Solanum tuberosum HOM05D008793 ORTHO05D000034 3.8e-10 68.2 39 82.1
Sopen03g015640 Solanum pennellii HOM05D000004 ORTHO05D003926 4.9e-10 67.8 47 74.5
PGSC0003DMG400039996 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.9e-10 67.8 53 67.9
Sopen09g008800 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-09 66.2 54 70.4
PGSC0003DMG400041168 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.9e-09 65.9 49 69.4
Sopen03g013700 Solanum pennellii HOM05D001133 ORTHO05D000034 2.4e-09 65.5 44 75.0
Sopen05g017340 Solanum pennellii HOM05D000004 ORTHO05D000034 2.4e-09 65.5 44 72.7
Sopen08g009020 Solanum pennellii HOM05D000004 ORTHO05D000034 2.4e-09 65.5 56 67.9
PGSC0003DMG400046029 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.4e-09 65.5 43 79.1
Sopen11g012500 Solanum pennellii HOM05D000014 ORTHO05D000016 4.2e-09 64.7 40 77.5
Sopen09g009630 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-09 64.3 65 53.8
Sopen11g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 5.4e-09 64.3 43 76.7
PGSC0003DMG400013191 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.1e-09 63.9 55 63.6
PGSC0003DMG400046893 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.1e-09 63.9 71 59.2
PGSC0003DMG400036388 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.3e-09 63.5 56 62.5
PGSC0003DMG400046274 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.2e-08 63.2 92 46.7
Sopen09g021240 Solanum pennellii HOM05D000004 ORTHO05D000034 1.6e-08 62.8 46 67.4
Sopen04g024100 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-08 62.4 53 67.9
PGSC0003DMG400034705 Solanum tuberosum HOM05D011937 ORTHO05D000034 2.1e-08 62.4 47 66.0
Sopen10g008680 Solanum pennellii HOM05D009548 ORTHO05D003926 3.5e-08 61.6 35 85.7
Sopen11g013650 Solanum pennellii HOM05D000004 ORTHO05D000034 3.5e-08 61.6 48 60.4
PGSC0003DMG400010939 Solanum tuberosum HOM05D000021 ORTHO05D000010 3.5e-08 61.6 48 68.8
Sopen08g013360 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-08 60.8 38 76.3
Sopen07g011500 Solanum pennellii HOM05D000006 ORTHO05D000001 7.8e-08 60.5 56 57.1
PGSC0003DMG400037955 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.8e-08 60.5 39 74.4
Sopen01g016340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 60.1 34 85.3
Sopen12g025720 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-07 59.7 41 73.2
Sopen03g017580 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-07 59.3 42 66.7
PGSC0003DMG400041274 Solanum tuberosum HOM05D000004 ORTHO05D003926 2.3e-07 58.9 52 63.5
Sopen05g009960 Solanum pennellii HOM05D000004 ORTHO05D000034 3.0e-07 58.5 55 56.4
Sopen12g014530 Solanum pennellii HOM05D000004 ORTHO05D000034 3.9e-07 58.2 48 60.4
Sopen07g016950 Solanum pennellii HOM05D000004 ORTHO05D000034 6.6e-07 57.4 33 81.8
Sopen01g013020 Solanum pennellii HOM05D000004 ORTHO05D000034 8.7e-07 57.0 43 65.1
Sopen06g016990 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-07 57.0 53 58.5
Sopen08g008390 Solanum pennellii HOM05D000004 ORTHO05D000034 8.7e-07 57.0 45 60.0
Sopen12g011770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 56.6 41 68.3
PGSC0003DMG400042450 Solanum tuberosum HOM05D000004 ORTHO05D396389 1.5e-06 56.2 65 58.5
Sopen03g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-06 55.8 40 67.5
PGSC0003DMG400038029 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.3e-06 55.1 31 83.9
PGSC0003DMG400039189 Solanum tuberosum HOM05D000004 ORTHO05D395760 3.3e-06 55.1 30 90.0
Sopen12g013660 Solanum pennellii HOM05D000004 ORTHO05D000034 4.3e-06 54.7 32 81.2
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 9.6e-06 53.5 47 61.7


User provided reference genes

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