Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.0e-185 651.7 340 100.0
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 5.6e-107 391.7 365 64.4
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.5e-85 319.3 310 61.9
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 1.5e-75 287.3 336 55.1
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 5.0e-71 272.3 305 57.7
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-65 253.8 174 78.7
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-63 246.1 163 83.4
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-63 246.1 172 77.9
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.5e-62 242.3 174 77.0
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.6e-61 239.6 164 79.9
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.4e-60 237.7 204 67.2
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 2.8e-58 229.9 214 62.1
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-58 228.8 382 41.9
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 3.5e-56 223.0 243 55.1
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.8e-55 219.5 207 57.0
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-52 211.1 209 56.5
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.7e-52 208.8 211 54.5
Sopen12g019440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-50 204.5 252 52.4
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.7e-50 204.1 137 80.3
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-50 203.0 327 41.6
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-49 200.7 367 39.0
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-49 199.9 207 52.7
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.7e-48 195.3 355 40.3
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-47 194.5 367 37.3
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.1e-45 187.2 139 77.7
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.2e-44 182.6 373 34.6
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.8e-44 182.2 254 46.1
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-43 180.6 364 35.7
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-40 171.0 352 34.9
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 2.0e-40 170.6 307 41.0
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-40 169.9 170 55.9
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-40 169.9 378 34.9
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.5e-40 169.5 298 37.2
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.9e-40 169.1 187 49.7
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-39 167.9 210 44.8
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-39 167.2 173 54.3
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-39 166.8 354 34.5
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 2.9e-39 166.8 210 45.7
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.8e-39 166.4 162 53.7
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-38 164.5 231 48.1
PGSC0003DMG400039593 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.5e-38 163.7 151 62.9
PGSC0003DMG400046895 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.5e-38 163.7 151 60.9
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-38 163.3 170 56.5
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 4.2e-38 162.9 210 43.8
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 1.6e-37 161.0 108 82.4
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-37 159.1 312 35.9
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 2.6e-35 153.7 197 41.6
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 4.4e-35 152.9 197 41.1
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 9.8e-35 151.8 312 33.7
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 8.3e-34 148.7 207 41.5
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-33 148.3 338 32.0
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-33 148.3 167 51.5
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-33 147.5 356 32.3
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-33 146.4 346 32.9
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-33 146.0 269 38.7
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.9e-32 142.5 330 31.8
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.7e-32 142.1 182 46.7
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-31 141.0 334 36.5
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 2.3e-31 140.6 391 30.9
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.6e-31 139.0 130 56.2
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.6e-31 139.0 292 36.0
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-30 137.5 120 57.5
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-30 136.3 120 58.3
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-29 133.3 122 55.7
Sopen09g010940 Solanum pennellii HOM05D003617 ORTHO05D007165 4.0e-28 129.8 147 49.7
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.8e-28 129.0 194 40.7
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 8.9e-28 128.6 197 39.1
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-27 127.1 248 37.1
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-27 126.7 386 29.8
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.7e-27 125.9 297 32.0
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.3e-26 122.1 201 39.8
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-25 119.4 312 31.1
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 9.2e-25 118.6 150 40.7
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-24 117.5 103 57.3
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.7e-24 117.1 174 41.4
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-24 116.7 279 34.1
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.8e-24 115.5 270 32.2
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.8e-24 115.5 168 41.1
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-22 111.3 116 50.9
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-22 110.2 336 31.0
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.6e-22 109.4 300 32.3
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 3.6e-21 106.7 106 50.9
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 2.6e-19 100.5 202 35.1
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-18 97.4 212 35.8
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 2.9e-18 97.1 177 37.3
PGSC0003DMG400037839 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.4e-17 94.7 65 75.4
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 1.9e-17 94.4 202 33.2
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.9e-17 94.4 154 40.9
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 7.0e-17 92.4 269 29.7
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-16 91.3 306 28.4
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-16 90.9 98 56.1
PGSC0003DMG400007445 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.0e-16 89.4 64 75.0
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-15 87.8 283 27.2
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-14 84.7 99 39.4
Nitab4.5_0000040g0570 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.5e-14 82.0 78 61.5
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-13 81.6 122 38.5
CAN.G1451.2 Capsicum annuum HOM05D003617 ORTHO05D007165 2.8e-13 80.5 134 39.6
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 6.8e-12 75.9 200 29.5
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.9e-12 75.5 123 37.4
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-11 75.1 68 55.9
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-11 73.2 128 38.3
PGSC0003DMG400045403 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.8e-11 72.8 56 67.9
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-10 70.1 283 27.9
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-09 68.2 150 32.0
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-09 67.8 245 26.5
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 3.2e-09 67.0 155 32.3
Solyc07g041360.1 Solanum lycopersicum HOM05D003617 ORTHO05D007165 1.2e-08 65.1 104 36.5
Nitab4.5_0000623g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-08 64.7 113 38.9
Nitab4.5_0007944g0030 Nicotiana tabacum HOM05D003617 ORTHO05D286428 1.6e-08 64.7 230 27.8
PGSC0003DMG400034694 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-08 64.7 134 31.3
Nitab4.5_0003624g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-08 63.5 78 47.4
Nitab4.5_0003674g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-07 60.1 164 29.9
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.6e-07 58.9 194 23.2
COL.COLO4_02834 Corchorus olitorius HOM05D014876 ORTHO05D012510 1.9e-06 57.8 210 26.7
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.9e-06 57.8 50 60.0
COL.COLO4_15854 Corchorus olitorius HOM05D014876 ORTHO05D012510 2.5e-06 57.4 210 26.7
CAN.G810.1 Capsicum annuum HOM05D003617 ORTHO05D007165 5.6e-06 56.2 103 34.0
Rhsim02G0146600 Rhododendron simsii HOM05D000995 ORTHO05D001773 9.5e-06 55.5 234 23.9


User provided reference genes

Program Settings