Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038531 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.7e-69 264.6 122 100.0
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 7.8e-35 150.6 119 63.0
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.9e-34 148.3 110 67.3
PGSC0003DMG400024835 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.6e-34 147.1 110 66.4
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 3.3e-33 145.2 110 64.5
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.6e-33 144.4 110 65.5
PGSC0003DMG400037627 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.6e-33 144.4 93 74.2
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.3e-33 144.1 108 67.6
Solyc04g063400.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.1e-32 142.5 110 64.5
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.1e-32 142.5 110 64.5
Solyc04g064450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.7e-32 141.4 110 62.7
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 4.7e-32 141.4 110 64.5
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 1.4e-31 139.8 110 62.7
Sopen04g026380 Solanum pennellii HOM05D000007 ORTHO05D000039 1.4e-31 139.8 110 62.7
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 1.8e-31 139.4 110 60.9
PGSC0003DMG400039355 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.4e-31 139.0 93 72.0
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.9e-31 137.1 108 64.8
Sopen04g026410 Solanum pennellii HOM05D000007 ORTHO05D000039 4.4e-30 134.8 99 68.7
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 9.9e-30 133.7 110 60.0
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 9.9e-30 133.7 110 60.0
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.2e-29 132.5 102 65.7
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 1.7e-26 122.9 86 70.9
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.1e-24 115.9 103 61.2
CAN.G46.1 Capsicum annuum HOM05D000007 ORTHO05D000039 1.8e-23 112.8 87 60.9
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.9e-23 110.9 99 58.6
Solyc04g064460.2 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.5e-22 109.8 104 51.0
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 6.4e-21 104.4 93 55.9
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 8.1e-16 87.4 79 54.4
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 8.4e-13 77.4 94 41.5
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.9e-12 76.3 92 42.4
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.2e-12 75.1 92 41.3
Peaxi162Scf00033g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 7.1e-12 74.3 94 41.5
PGSC0003DMG400013031 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.1e-12 74.3 93 39.8
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 9.3e-12 73.9 91 44.0
Nitab4.5_0000174g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.3e-12 73.9 57 63.2
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 9.3e-12 73.9 101 41.6
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-11 73.2 96 39.6
Sopen06g019900 Solanum pennellii HOM05D000007 ORTHO05D000039 1.6e-11 73.2 93 38.7
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 3.5e-11 72.0 92 42.4
PGSC0003DMG400030753 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.6e-11 71.6 83 38.6
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.3e-10 69.3 115 32.2
PGSC0003DMG400045617 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.3e-10 69.3 88 39.8
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-10 68.9 92 44.6
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 3.0e-10 68.9 83 44.6
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.9e-10 68.6 89 38.2
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.1e-09 67.0 84 36.9
Nitab4.5_0010416g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.1e-09 67.0 87 42.5
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 1.9e-09 66.2 92 42.4
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.9e-09 66.2 83 37.3
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.3e-09 65.5 81 39.5
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.6e-09 64.7 81 38.3
Nitab4.5_0001821g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.6e-09 63.9 87 40.2
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.3e-08 63.5 81 39.5
Cfa000448 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-08 63.2 93 36.6
Cfa000455 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-08 63.2 86 36.0
Cfa000495 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.2e-08 61.2 81 39.5
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.2e-08 61.2 40 75.0
Lj5C836T5 Lonicera japonica HOM05D000007 ORTHO05D000039 8.1e-08 60.8 114 29.8
Peaxi162Scf00033g00031 Petunia axillaris HOM05D000007 ORTHO05D000039 8.1e-08 60.8 83 36.1
Cfa000440 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.1e-07 60.5 81 35.8
Nitab4.5_0020718g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.1e-07 58.9 48 62.5
CiPaw.07G024400 Carya illinoinensis HOM05D000007 ORTHO05D000039 4.0e-07 58.5 85 37.6
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 4.0e-07 58.5 114 29.8
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.3e-07 58.2 84 32.1
CiPaw.07G024100 Carya illinoinensis HOM05D000007 ORTHO05D000039 5.3e-07 58.2 75 40.0
Peaxi162Scf00037g00084 Petunia axillaris HOM05D000007 ORTHO05D000039 6.9e-07 57.8 83 34.9
CiPaw.07G024200 Carya illinoinensis HOM05D000007 ORTHO05D000039 9.0e-07 57.4 85 37.6
Ciclev10027392m.g Citrus clementina HOM05D000007 ORTHO05D000039 9.0e-07 57.4 88 37.5
Cfa000452 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-06 57.0 81 32.1
Duzib114G0947 Durio zibethinus HOM05D000007 ORTHO05D000039 1.2e-06 57.0 82 34.1
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.5e-06 56.6 97 35.1
CiPaw.07G024500 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.0e-06 56.2 85 37.6
Ciclev10027421m.g Citrus clementina HOM05D000007 ORTHO05D000039 2.0e-06 56.2 74 40.5
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.0e-06 56.2 100 31.0
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.0e-06 56.2 100 35.0
CiPaw.07G024300 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.6e-06 55.8 75 38.7
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.6e-06 55.8 99 35.4
Thecc.10G168400 Theobroma cacao HOM05D000007 ORTHO05D000039 2.6e-06 55.8 75 34.7
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 2.6e-06 55.8 75 34.7
Cfa000449 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.4e-06 55.5 81 33.3
Lj5C842T1 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-06 55.5 85 36.5
Lj6C102T0 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-06 55.5 86 37.2
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 4.5e-06 55.1 84 33.3
Lj5C836T3 Lonicera japonica HOM05D000007 ORTHO05D000039 4.5e-06 55.1 86 36.0
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 4.5e-06 55.1 87 35.6
Cfa000443 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.8e-06 54.7 81 33.3
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.8e-06 54.7 92 35.9
Cfa000453 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.6e-06 54.3 81 33.3
Lj7P401T34 Lonicera japonica HOM05D000007 ORTHO05D000039 7.6e-06 54.3 101 32.7
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-05 53.9 107 28.0
Thecc.10G168500 Theobroma cacao HOM05D000007 ORTHO05D000039 1.0e-05 53.9 74 35.1


User provided reference genes

Program Settings