Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-109 399.1 210 100.0
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.2e-77 292.7 169 94.7
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-69 266.2 169 87.0
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.9e-69 265.0 158 91.8
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.1e-63 245.7 163 83.4
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-62 243.8 140 92.9
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.0e-58 229.2 148 85.8
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-51 207.2 130 87.7
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-51 206.8 123 92.7
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.0e-50 202.6 130 86.9
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 3.9e-50 202.2 197 60.9
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-44 184.1 175 57.7
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-43 180.3 175 57.7
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-42 177.2 199 49.7
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.7e-42 174.9 106 87.7
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 4.3e-41 172.2 108 86.1
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-41 171.4 198 49.5
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-40 168.7 168 55.4
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-39 166.0 175 55.4
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-39 166.0 153 60.8
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 4.0e-39 165.6 128 73.4
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-38 164.1 175 53.7
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-36 156.0 188 49.5
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 4.6e-35 152.1 101 83.2
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-34 150.2 185 48.1
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.7e-34 148.3 175 49.1
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 2.5e-33 146.4 118 70.3
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 2.0e-30 136.7 171 48.5
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-30 136.3 140 53.6
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-29 133.7 161 49.1
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-29 133.7 129 57.4
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 5.0e-29 132.1 171 48.5
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 6.5e-29 131.7 172 43.0
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-28 130.6 172 42.4
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 3.2e-28 129.4 171 46.2
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-27 126.7 125 56.8
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.9e-27 124.8 157 49.0
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-26 122.9 117 57.3
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-25 120.2 122 53.3
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.7e-25 117.9 119 52.9
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-24 117.5 126 53.2
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.8e-24 116.3 122 53.3
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-23 113.2 107 58.9
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 3.1e-23 112.8 171 40.9
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 4.1e-23 112.5 167 43.1
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 5.3e-23 112.1 133 51.9
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.0e-23 111.3 142 43.0
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-22 109.8 146 45.9
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.5e-22 109.0 119 50.4
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 2.2e-21 106.7 171 41.5
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.5e-21 105.1 108 55.6
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-20 103.2 159 41.5
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-20 103.2 124 46.0
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-20 102.8 127 47.2
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.2e-20 102.4 170 40.0
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 2.1e-19 100.1 158 42.4
Nitab4.5_0000040g0570 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-19 98.6 87 62.1
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.3e-18 96.7 154 39.6
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.3e-18 96.7 62 82.3
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-17 94.4 143 42.7
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-17 92.8 122 44.3
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-17 92.8 122 45.9
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.7e-17 91.3 128 43.8
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.7e-16 90.5 134 42.5
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 2.2e-16 90.1 116 43.1
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 2.2e-16 90.1 169 36.7
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-16 89.0 106 50.9
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-16 88.2 82 59.8
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.4e-15 86.7 153 39.2
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-15 85.9 79 58.2
CAN.G1451.2 Capsicum annuum HOM05D003617 ORTHO05D007165 5.3e-15 85.5 143 39.2
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.3e-15 85.5 139 41.7
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-14 83.6 79 55.7
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 2.0e-14 83.6 169 34.3
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 3.4e-14 82.8 106 48.1
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.7e-14 81.6 65 66.2
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.7e-14 81.6 83 53.0
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-13 79.7 79 53.2
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 6.5e-13 78.6 177 31.6
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-12 76.3 72 54.2
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-10 70.5 196 30.1
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-10 69.3 58 58.6
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-10 69.3 76 47.4
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-09 67.4 121 38.8
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-09 66.2 161 31.7
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 5.7e-09 65.5 68 57.4
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-09 65.1 53 66.0
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.4e-09 65.1 50 66.0
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.7e-09 64.7 108 37.0
CAN.G810.1 Capsicum annuum HOM05D003617 ORTHO05D007165 2.2e-08 63.5 110 36.4
Nitab4.5_0003624g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.8e-08 63.2 78 46.2
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-08 62.8 61 55.7
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-08 62.4 63 55.6
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.1e-07 58.2 55 56.4
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 3.5e-06 56.2 58 56.9
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 5.9e-06 55.5 65 41.5
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.7e-06 55.1 182 26.9


User provided reference genes

Program Settings