Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-129 464.5 238 100.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-58 228.8 421 40.1
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-45 186.0 368 39.4
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-44 182.6 387 36.7
PGSC0003DMG400035035 Solanum tuberosum HOM05D003888 ORTHO05D010458 8.1e-36 154.8 123 65.9
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-35 152.9 323 38.7
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.3e-21 105.1 63 82.5
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-20 103.2 61 83.6
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-19 99.4 61 80.3
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-18 97.1 58 82.8
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-17 94.0 66 68.2
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-17 93.2 61 70.5
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-17 92.4 63 73.0
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.4e-17 92.0 78 62.8
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-15 85.1 61 65.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.0e-14 84.7 61 68.9
PGSC0003DMG400035304 Solanum tuberosum HOM05D003888 ORTHO05D010458 1.0e-14 84.7 122 41.8
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-14 82.4 64 56.2
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 8.7e-14 81.6 53 69.8
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-13 80.9 101 48.5
PGSC0003DMG400039797 Solanum tuberosum HOM05D003888 ORTHO05D010458 1.5e-13 80.9 53 71.7
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-13 80.1 56 64.3
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 2.5e-13 80.1 61 57.4
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 2.5e-13 80.1 56 64.3
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-13 79.7 91 48.4
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.3e-13 79.3 61 57.4
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.7e-12 76.3 63 57.1
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.1e-12 75.1 71 49.3
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.1e-12 75.1 45 77.8
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-11 73.9 61 49.2
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-11 73.6 61 49.2
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-11 73.2 58 55.2
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 4.0e-11 72.8 69 47.8
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.0e-11 72.8 61 55.7
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-11 72.8 61 50.8
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 5.3e-11 72.4 61 50.8
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 5.3e-11 72.4 80 41.2
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-11 72.4 61 47.5
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-11 71.6 60 46.7
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-10 71.2 61 45.9
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-10 71.2 61 47.5
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 1.5e-10 70.9 56 60.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-10 70.9 49 61.2
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-10 70.5 60 46.7
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 2.6e-10 70.1 61 49.2
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-10 69.7 61 49.2
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.4e-10 69.7 64 48.4
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-10 69.3 61 47.5
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 5.8e-10 68.9 68 48.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.0e-09 68.2 56 50.0
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.0e-09 68.2 71 47.9
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-09 68.2 61 44.3
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-09 67.8 61 45.9
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-09 67.4 61 47.5
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-09 66.6 57 49.1
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-09 66.6 61 45.9
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-09 66.6 60 45.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 4.9e-09 65.9 68 44.1
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 6.4e-09 65.5 62 54.8
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-08 64.7 69 42.0
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-08 64.3 61 45.9
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.9e-08 63.9 61 45.9
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-08 63.5 61 44.3
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-08 63.5 61 42.6
Nitab4.5_0000409g0140 Nicotiana tabacum HOM05D008541 ORTHO05D010458 3.2e-08 63.2 104 41.3
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 5.5e-08 62.4 42 66.7
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.1e-08 62.0 61 41.0
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-08 62.0 57 45.6
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.3e-08 61.6 57 45.6
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-07 61.2 60 45.0
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-07 61.2 50 50.0
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-07 61.2 58 46.6
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 3.5e-07 59.7 60 46.7
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-07 59.7 57 45.6
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-07 59.3 61 39.3
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 6.0e-07 58.9 53 49.1
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-06 57.8 57 43.9
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-06 57.4 48 47.9
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.3e-06 57.0 71 42.3
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-06 57.0 57 43.9
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.1e-06 55.8 50 46.0


User provided reference genes

Program Settings