Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400037047 Solanum tuberosum HOM05D022799 ORTHO05D026034 1.2e-92 343.2 171 100.0
PGSC0003DMG400008246 Solanum tuberosum HOM05D022799 ORTHO05D026034 5.8e-36 154.8 100 82.0
PGSC0003DMG400040734 Solanum tuberosum HOM05D022799 ORTHO05D026034 2.2e-19 99.8 52 94.2
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.8e-14 82.0 183 36.6
Solyc08g061275.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 1.8e-13 80.1 70 52.9
Sopen07g006420 Solanum pennellii HOM05D004064 ORTHO05D037746 9.0e-13 77.8 50 76.0
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 1.7e-11 73.6 210 31.4
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-11 72.8 103 47.6
PGSC0003DMG400046864 Solanum tuberosum HOM05D000017 ORTHO05D009561 6.5e-11 71.6 100 44.0
CAN.G147.9 Capsicum annuum HOM05D000541 ORTHO05D009561 1.4e-10 70.5 160 36.9
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 5.5e-10 68.6 223 30.5
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.1e-10 68.2 167 34.1
Sopen08g010420 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-09 67.4 36 80.6
Sopen09g017060 Solanum pennellii HOM05D010431 ORTHO05D016891 1.2e-09 67.4 169 33.1
PGSC0003DMG400036592 Solanum tuberosum HOM05D010431 ORTHO05D016891 1.2e-09 67.4 92 45.7
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.6e-09 67.0 169 34.9
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 4.6e-09 65.5 174 31.0
Sopen01g032040 Solanum pennellii HOM05D010431 ORTHO05D016891 6.1e-09 65.1 106 42.5
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 7.9e-09 64.7 98 48.0
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-08 64.3 104 45.2
CAN.G673.18 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-08 63.9 116 37.1
Solyc05g041970.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 1.3e-08 63.9 33 78.8
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 2.3e-08 63.2 190 32.1
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.3e-08 63.2 105 48.6
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 3.0e-08 62.8 104 44.2
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 5.1e-08 62.0 98 45.9
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.7e-08 61.6 109 35.8
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 8.7e-08 61.2 102 45.1
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 98 45.9
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 1.5e-07 60.5 180 31.1
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-07 60.1 104 45.2
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 2.5e-07 59.7 108 46.3
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 2.5e-07 59.7 108 46.3
PGSC0003DMG400017333 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.5e-07 59.7 53 60.4
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 4.3e-07 58.9 56 50.0
Sopen05g023420 Solanum pennellii HOM05D000047 ORTHO05D009561 4.3e-07 58.9 98 44.9
Sopen10g014100 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 58.9 104 45.2
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 5.7e-07 58.5 97 42.3
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 5.7e-07 58.5 108 45.4
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 5.7e-07 58.5 53 58.5
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 9.7e-07 57.8 93 41.9
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 9.7e-07 57.8 101 45.5
Peaxi162Scf00455g00911 Petunia axillaris HOM05D000017 ORTHO05D012383 1.3e-06 57.4 174 30.5
Peaxi162Scf00897g00039 Petunia axillaris HOM05D000017 ORTHO05D001349 1.3e-06 57.4 179 32.4
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 1.3e-06 57.4 183 32.8
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.3e-06 57.4 108 44.4
Sopen10g027270 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-06 57.4 104 41.3
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 2.2e-06 56.6 56 46.4
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 2.2e-06 56.6 59 42.4
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 98 45.9
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 2.2e-06 56.6 108 43.5
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 98 45.9
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 98 45.9
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 98 45.9
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-06 56.6 98 45.9
Peaxi162Scf00211g00119 Petunia axillaris HOM05D000017 ORTHO05D001349 2.8e-06 56.2 174 33.3
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 2.8e-06 56.2 57 47.4
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.8e-06 56.2 86 38.4
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.7e-06 55.8 56 44.6
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 3.7e-06 55.8 59 39.0
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 3.7e-06 55.8 74 47.3
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 3.7e-06 55.8 59 40.7
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.7e-06 55.8 59 42.4
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 4.8e-06 55.5 132 37.1
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 4.8e-06 55.5 98 44.9
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 6.3e-06 55.1 59 45.8
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 6.3e-06 55.1 175 32.0
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 6.3e-06 55.1 59 39.0
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 6.3e-06 55.1 106 37.7
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-06 55.1 59 40.7
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.2e-06 54.7 103 40.8
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.2e-06 54.7 65 40.0
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 8.2e-06 54.7 106 41.5


User provided reference genes

Program Settings