Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.9e-105 385.2 186 100.0
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 1.5e-61 240.0 196 65.8
Solyc02g062060.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 7.4e-61 237.7 196 65.3
Solyc02g061870.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.1e-59 231.9 186 65.6
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 7.0e-43 177.9 147 62.6
PGSC0003DMG400023889 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.2e-42 177.2 189 55.0
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 5.0e-41 171.8 147 60.5
Sopen02g013010 Solanum pennellii HOM05D008149 ORTHO05D010130 5.5e-40 168.3 183 53.0
PGSC0003DMG400023892 Solanum tuberosum HOM05D008149 ORTHO05D010130 7.2e-40 167.9 171 55.6
PGSC0003DMG400023888 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.2e-39 167.2 152 60.5
PGSC0003DMG400035879 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.6e-39 166.8 152 59.9
Solyc02g061910.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.6e-39 165.6 211 49.8
PGSC0003DMG400045200 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.7e-39 165.2 169 58.6
PGSC0003DMG400037967 Solanum tuberosum HOM05D008149 ORTHO05D010130 5.2e-38 161.8 151 60.3
Sopen02g012890 Solanum pennellii HOM05D008149 ORTHO05D010130 6.7e-38 161.4 151 59.6
Sopen02g013030 Solanum pennellii HOM05D008149 ORTHO05D010130 6.7e-38 161.4 170 51.8
CAN.G158.3 Capsicum annuum HOM05D008149 ORTHO05D010130 1.3e-36 157.1 164 51.8
PGSC0003DMG400042894 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.8e-33 145.6 169 50.3
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.0e-33 145.2 150 50.0
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 2.6e-29 132.9 148 46.6
Solyc02g062090.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.6e-26 123.6 76 73.7
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 3.5e-26 122.5 189 42.9
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 1.0e-25 120.9 167 44.9
Peaxi162Scf00650g00014 Petunia axillaris HOM05D008149 ORTHO05D010130 1.1e-24 117.5 167 43.7
Solyc02g062210.3 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.5e-24 116.3 199 39.7
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 3.3e-24 115.9 144 47.2
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 9.5e-24 114.4 145 44.8
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.1e-23 113.2 151 44.4
Nitab4.5_0009705g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.1e-23 111.7 133 47.4
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 1.0e-22 110.9 159 44.7
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 4.0e-22 109.0 166 41.6
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 4.0e-22 109.0 166 41.6
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 4.0e-22 109.0 166 41.6
Sopen00g013830 Solanum pennellii HOM05D008149 ORTHO05D010130 6.8e-22 108.2 142 43.0
Sopen02g012300 Solanum pennellii HOM05D010460 ORTHO05D010130 8.9e-22 107.8 177 38.4
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.7e-21 105.1 156 39.7
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 7.5e-21 104.8 157 41.4
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 9.8e-21 104.4 136 44.9
Nitab4.5_0001896g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.3e-20 104.0 148 41.2
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.2e-20 103.2 156 41.0
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.7e-20 102.4 157 40.8
Solyc02g062080.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.9e-20 102.1 208 37.5
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.9e-20 102.1 164 37.8
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.1e-19 99.0 156 39.1
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 2.0e-18 96.7 145 40.0
CAN.G1485.2 Capsicum annuum HOM05D008149 ORTHO05D010130 2.0e-18 96.7 116 46.6
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 2.0e-18 96.7 149 38.3
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 2.0e-18 96.7 149 38.3
CAN.G569.40 Capsicum annuum HOM05D008149 ORTHO05D010130 5.9e-18 95.1 157 41.4
Peaxi162Scf00245g01014 Petunia axillaris HOM05D017006 ORTHO05D010130 2.3e-17 93.2 203 34.0
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 5.0e-17 92.0 132 38.6
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.2e-15 87.4 144 40.3
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 1.6e-15 87.0 145 41.4
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 6.1e-15 85.1 142 39.4
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 8.0e-15 84.7 171 37.4
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.0e-15 84.7 145 41.4
PGSC0003DMG400008179 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.4e-14 84.0 126 44.4
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 1.2e-13 80.9 109 40.4
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-13 80.5 154 30.5
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-13 80.5 154 30.5
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-13 80.5 154 30.5
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-13 78.6 141 39.7
Peaxi162Scf00009g00021 Petunia axillaris HOM05D009491 ORTHO05D003796 4.9e-12 75.5 154 27.9
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 4.1e-11 72.4 145 35.2
Peaxi162Scf00245g00118 Petunia axillaris HOM05D008149 ORTHO05D010130 2.0e-10 70.1 107 43.9
Peaxi162Scf00245g01210 Petunia axillaris HOM05D017006 ORTHO05D010130 2.0e-10 70.1 145 35.9
Cfa013250 Carpinus fangiana HOM05D009365 ORTHO05D000952 7.8e-10 68.2 165 31.5
Peaxi162Scf00106g00206 Petunia axillaris HOM05D008050 ORTHO05D003796 7.8e-10 68.2 146 28.8
Peaxi162Scf01007g00110 Petunia axillaris HOM05D009491 ORTHO05D003796 1.3e-09 67.4 135 29.6
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.7e-09 67.0 148 27.7
CAN.G616.30 Capsicum annuum HOM05D009491 ORTHO05D003796 2.3e-09 66.6 189 26.5
FAN24G3101 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.9e-09 65.9 168 31.5
FAN15G3021 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.0e-09 65.5 151 34.4
Peaxi162Scf00397g00002 Petunia axillaris HOM05D009491 ORTHO05D003796 5.0e-09 65.5 129 31.0
Nitab4.5_0000008g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 6.6e-09 65.1 116 34.5
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 8.6e-09 64.7 175 28.6
Solyc02g062070.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.9e-08 63.5 77 46.8
PGSC0003DMG400038867 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.5e-08 63.2 126 28.6
Thecc.05G051100 Theobroma cacao HOM05D000010 ORTHO05D000952 2.5e-08 63.2 125 31.2
Aqoxy5G02186 Aquilegia oxysepala HOM05D000010 ORTHO05D014820 9.5e-08 61.2 138 37.7
Nitab4.5_0009705g0050 Nicotiana tabacum HOM05D008149 ORTHO05D010130 9.5e-08 61.2 65 46.2
Haze_23870 Corylus avellana HOM05D009365 ORTHO05D000952 1.2e-07 60.8 179 27.4
PGSC0003DMG400009377 Solanum tuberosum HOM05D009491 ORTHO05D003796 3.6e-07 59.3 142 26.1
CAN.G78.31 Capsicum annuum HOM05D001826 ORTHO05D004184 4.7e-07 58.9 159 27.7
Haze_21692 Corylus avellana HOM05D009365 ORTHO05D000952 4.7e-07 58.9 97 36.1
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 6.2e-07 58.5 145 26.9
SGA_v2.0_scaffold18G08273 Striga asiatica HOM05D007636 ORTHO05D003796 6.2e-07 58.5 145 26.2
Haze_23566 Corylus avellana HOM05D002630 ORTHO05D000952 1.8e-06 57.0 152 27.0
Rhsim04G0211600 Rhododendron simsii HOM05D008858 ORTHO05D000952 1.8e-06 57.0 162 28.4
EL10Ac2g02925 Beta vulgaris HOM05D010810 ORTHO05D018537 2.3e-06 56.6 175 28.6
COL.COLO4_28749 Corchorus olitorius HOM05D013935 ORTHO05D000952 6.8e-06 55.1 146 31.5
Ah.02g124550 Amaranthus hybridus HOM05D000010 ORTHO05D000063 8.9e-06 54.7 170 30.0
Rhsim04G0194200 Rhododendron simsii HOM05D008858 ORTHO05D000952 8.9e-06 54.7 168 29.8
RcHm_v2.0_Chr2g0099671 Rosa chinensis HOM05D000010 ORTHO05D000063 8.9e-06 54.7 153 32.0


User provided reference genes

Program Settings