Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-91 340.1 189 100.0
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-61 238.8 152 88.8
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.5e-48 194.1 132 82.6
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-46 188.3 102 92.2
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-46 188.0 115 96.5
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-40 170.2 125 84.8
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-36 156.8 98 78.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.4e-35 151.8 98 75.5
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-34 149.4 123 77.2
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-30 134.8 113 76.1
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-29 134.0 129 51.9
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.3e-27 124.4 99 53.5
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.3e-27 124.4 99 52.5
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-26 121.3 99 51.5
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-25 119.4 99 51.5
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 7.4e-24 114.8 99 50.5
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-23 113.2 137 48.9
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-23 112.5 127 51.2
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-22 110.9 99 48.5
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-22 110.2 107 54.2
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-21 106.3 117 50.4
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 2.2e-20 103.2 106 53.8
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.4e-20 101.7 124 45.2
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-20 101.3 61 83.6
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-18 97.1 146 40.4
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-18 96.7 132 37.9
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-18 95.1 133 36.1
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-18 94.7 163 35.6
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-18 94.7 67 68.7
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-16 89.4 99 45.5
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 7.4e-16 88.2 99 40.4
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 7.4e-16 88.2 157 32.5
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-15 87.4 95 48.4
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-15 87.4 132 36.4
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 1.6e-15 87.0 99 40.4
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-15 86.7 99 40.4
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.2e-15 85.1 68 55.9
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-14 83.2 110 45.5
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 3.1e-14 82.8 135 39.3
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.1e-14 82.8 62 59.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 4.0e-14 82.4 151 33.8
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-13 80.9 50 76.0
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.2e-13 80.9 50 76.0
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-13 80.1 97 41.2
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.0e-13 80.1 161 35.4
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 4.5e-13 79.0 109 42.2
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-12 77.4 83 45.8
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-12 77.4 99 38.4
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-12 76.6 62 53.2
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.9e-12 76.3 127 36.2
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-12 75.5 62 51.6
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 8.4e-12 74.7 111 39.6
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-11 74.3 64 51.6
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-11 74.3 64 48.4
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.4e-11 73.9 70 51.4
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-11 73.6 125 32.8
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-11 73.6 125 32.0
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-11 73.2 125 32.0
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 3.2e-11 72.8 125 32.0
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.2e-11 72.8 90 38.9
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-11 72.4 131 31.3
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 9.3e-11 71.2 125 32.0
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 9.3e-11 71.2 63 50.8
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.2e-10 70.9 65 49.2
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-10 70.9 57 52.6
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-10 69.7 64 51.6
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 3.5e-10 69.3 116 32.8
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 3.5e-10 69.3 62 50.0
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 4.6e-10 68.9 97 37.1
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-10 68.6 62 48.4
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 7.9e-10 68.2 95 43.2
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 7.9e-10 68.2 36 77.8
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-10 68.2 68 47.1
Peaxi162Scf00373g00032 Petunia axillaris HOM05D003888 ORTHO05D007163 1.0e-09 67.8 82 45.1
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 67.4 151 29.1
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-09 67.4 99 38.4
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 1.8e-09 67.0 90 37.8
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 2.3e-09 66.6 57 49.1
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-09 66.6 51 56.9
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-09 66.6 59 52.5
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 5.1e-09 65.5 38 73.7
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-09 65.5 58 50.0
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-09 65.1 107 34.6
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 8.7e-09 64.7 97 46.4
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-08 64.3 62 45.2
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.5e-08 63.9 146 28.8
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-08 63.9 62 45.2
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 2.5e-08 63.2 36 75.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 4.3e-08 62.4 62 46.8
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-08 62.4 58 50.0
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.7e-08 62.0 109 34.9
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 7.4e-08 61.6 113 30.1
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.4e-08 61.6 37 73.0
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 7.4e-08 61.6 37 70.3
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.6e-07 60.5 65 49.2
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-07 60.5 58 48.3
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-07 60.1 62 45.2
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-07 59.7 99 30.3
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 2.8e-07 59.7 159 25.2
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.7e-07 59.3 65 47.7
Peaxi162Scf00962g00310 Petunia axillaris HOM05D008541 ORTHO05D010458 4.8e-07 58.9 37 67.6
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 6.3e-07 58.5 55 54.5
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 8.2e-07 58.2 160 25.0
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-06 57.8 165 24.2
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 1.1e-06 57.8 164 24.4
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-06 57.8 66 45.5
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-06 57.8 50 48.0
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-06 57.8 48 52.1
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 1.4e-06 57.4 165 24.2
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.8e-06 57.0 62 46.8
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-06 57.0 39 61.5
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 3.1e-06 56.2 88 37.5
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.1e-06 55.8 219 23.3
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 6.9e-06 55.1 199 23.1
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.9e-06 55.1 64 43.8
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.9e-06 55.1 64 43.8
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 9.0e-06 54.7 165 23.6
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 9.0e-06 54.7 191 24.6
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.0e-06 54.7 67 41.8
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 9.0e-06 54.7 42 47.6


User provided reference genes

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