Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.3e-114 416.4 211 100.0
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 2.8e-104 382.1 213 94.4
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.3e-93 346.7 196 94.4
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.0e-90 335.5 210 80.5
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.5e-89 332.4 210 79.5
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 3.6e-72 275.4 198 74.2
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.5e-65 253.4 201 67.7
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.7e-61 240.0 207 61.4
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.2e-60 235.7 201 63.2
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.9e-52 209.9 208 56.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 3.9e-50 202.2 205 52.2
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.9e-49 199.9 174 61.5
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 4.8e-48 195.3 203 50.7
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 6.2e-48 194.9 204 48.5
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 8.2e-48 194.5 203 49.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 4.1e-47 192.2 206 48.1
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 5.3e-47 191.8 207 50.7
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 5.3e-47 191.8 206 51.0
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 6.9e-47 191.4 220 47.3
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 9.0e-47 191.0 210 49.5
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.0e-45 187.6 201 49.8
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.0e-45 187.6 233 46.8
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 1.0e-45 187.6 201 49.8
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 1.0e-45 187.6 201 49.8
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.7e-45 186.8 142 64.8
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.5e-44 183.0 207 46.9
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 4.2e-44 182.2 198 49.5
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 5.5e-44 181.8 211 50.2
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.1e-44 181.4 207 47.3
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 9.3e-44 181.0 219 45.7
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.6e-43 180.3 207 49.3
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.1e-43 179.9 207 46.4
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.1e-43 179.9 207 47.8
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.5e-43 179.1 206 48.1
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 3.0e-42 176.0 208 46.6
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 3.9e-42 175.6 202 46.5
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.5e-41 172.9 204 47.5
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 7.4e-41 171.4 205 47.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.2e-40 169.9 207 44.9
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.4e-39 167.2 210 45.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.1e-39 166.0 197 47.2
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 4.1e-39 165.6 213 45.1
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.0e-38 163.3 209 41.1
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.6e-38 162.9 201 46.3
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.2e-37 159.8 207 43.0
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 2.9e-37 159.5 197 46.2
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.8e-37 159.1 207 43.5
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.8e-37 159.1 207 43.5
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.0e-37 158.7 207 43.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.9e-36 156.8 196 42.9
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.9e-36 156.8 196 42.9
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.9e-36 156.8 198 46.0
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.5e-36 156.4 198 42.4
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 2.5e-36 156.4 208 43.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 9.4e-36 154.5 219 42.9
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 9.4e-36 154.5 204 44.1
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 9.4e-36 154.5 204 42.6
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 1.6e-35 153.7 218 42.2
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.1e-35 153.3 207 42.0
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.1e-35 153.3 206 43.2
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.7e-35 152.9 206 41.3
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 6.1e-35 151.8 211 43.6
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 7.9e-35 151.4 220 42.7
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.0e-34 151.0 206 42.7
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.8e-34 150.2 208 42.3
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 3.0e-34 149.4 156 51.3
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 8.8e-34 147.9 189 45.0
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 8.8e-34 147.9 206 39.8
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.5e-33 147.1 195 45.1
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.5e-33 146.4 205 43.9
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 2.5e-33 146.4 196 43.4
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.3e-33 146.0 194 44.3
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 7.4e-33 144.8 205 41.5
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 2.2e-32 143.3 199 43.2
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 8.2e-32 141.4 210 44.3
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.4e-31 140.6 213 42.7
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.8e-31 140.2 212 39.2
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.8e-31 140.2 192 42.2
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.8e-31 140.2 193 40.9
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 4.1e-31 139.0 194 39.7
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 5.3e-31 138.7 201 44.3
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 9.1e-31 137.9 202 43.1
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 9.1e-31 137.9 206 42.2
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 7.7e-30 134.8 219 37.0
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.3e-29 134.0 192 40.1
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 1.3e-29 134.0 207 40.6
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.3e-29 134.0 202 41.6
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.9e-29 132.9 156 46.2
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.4e-28 130.6 210 37.6
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 2.5e-28 129.8 195 42.1
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 2.1e-27 126.7 200 43.0
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 3.6e-27 125.9 210 39.0
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 6.1e-27 125.2 200 43.0
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.0e-26 124.4 196 41.8
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.5e-25 120.6 200 40.5
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.5e-25 120.6 200 40.5
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 3.3e-25 119.4 218 41.3
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 7.4e-25 118.2 197 42.6
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 1.7e-24 117.1 194 42.3
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 3.7e-24 115.9 200 40.5
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 8.2e-24 114.8 200 41.0
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.4e-23 114.0 202 39.1
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 7.0e-23 111.7 215 34.0
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 2.0e-22 110.2 198 39.4
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.6e-22 109.8 164 44.5
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 7.7e-22 108.2 178 35.4
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.1e-20 104.4 198 36.9
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 1.1e-20 104.4 206 36.9
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 7.2e-20 101.7 200 38.0
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.7e-19 99.8 153 37.9
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 6.7e-18 95.1 199 32.2
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 4.5e-14 82.4 156 35.3
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 1.7e-13 80.5 198 33.3
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 9.4e-12 74.7 142 38.7
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 4.0e-10 69.3 41 68.3
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 4.0e-10 69.3 41 68.3
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 2.2e-08 63.5 99 41.4
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 2.2e-08 63.5 113 35.4
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 2.2e-08 63.5 91 38.5
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.7e-08 62.8 98 39.8
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 6.3e-08 62.0 221 28.1
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 2.4e-07 60.1 40 62.5
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 4.1e-07 59.3 161 28.6
SalBow7G2854 Salvia bowleyana HOM05D008060 ORTHO05D003608 1.2e-06 57.8 81 46.9
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.0e-06 57.0 148 29.1


User provided reference genes

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