Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.8e-172 608.6 324 100.0
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 3.4e-61 239.6 205 70.7
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 1.7e-57 227.3 242 62.4
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 1.2e-50 204.5 390 41.3
Sopen04g023590 Solanum pennellii HOM05D010431 ORTHO05D030636 2.6e-45 186.8 301 51.8
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.1e-41 172.6 80 100.0
PGSC0003DMG400017333 Solanum tuberosum HOM05D010431 ORTHO05D016891 5.6e-40 169.1 100 87.0
Sopen09g017060 Solanum pennellii HOM05D010431 ORTHO05D016891 2.0e-37 160.6 270 43.3
Solyc04g054147.1 Solanum lycopersicum HOM05D010431 ORTHO05D030636 1.3e-31 141.4 163 57.7
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 3.7e-31 139.8 140 57.1
Sopen01g032040 Solanum pennellii HOM05D010431 ORTHO05D016891 5.0e-28 129.4 203 43.3
PGSC0003DMG400043257 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.5e-27 127.1 229 48.0
PGSC0003DMG400036592 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.7e-26 123.6 234 48.7
PGSC0003DMG400038634 Solanum tuberosum HOM05D010431 ORTHO05D051313 4.6e-26 122.9 94 74.5
Sopen03g016300 Solanum pennellii HOM05D010431 ORTHO05D016891 2.3e-25 120.6 103 65.0
Sopen04g023140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-23 114.4 86 72.1
Solyc03g096700.3 Solanum lycopersicum HOM05D010431 ORTHO05D010855 1.1e-19 101.7 114 58.8
PGSC0003DMG400037601 Solanum tuberosum HOM05D010431 ORTHO05D016891 5.7e-16 89.4 49 81.6
PGSC0003DMG400040922 Solanum tuberosum HOM05D010431 ORTHO05D009909 5.3e-14 82.8 130 42.3
Solyc04g051787.1 Solanum lycopersicum HOM05D010431 ORTHO05D016891 9.1e-14 82.0 45 82.2
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 1.3e-12 78.2 77 48.1
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.7e-12 77.8 80 47.5
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-12 77.0 80 46.2
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.5e-12 75.9 80 45.0
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-11 75.1 80 45.0
Sopen10g015690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-11 75.1 243 39.9
Sopen02g009950 Solanum pennellii HOM05D010431 ORTHO05D030636 1.4e-11 74.7 123 45.5
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.2e-11 73.6 79 43.0
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.5e-11 72.8 76 47.4
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.5e-11 72.8 72 45.8
CAN.G69.25 Capsicum annuum HOM05D010431 ORTHO05D016891 9.4e-11 72.0 132 39.4
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.4e-11 72.0 74 43.2
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-10 71.6 93 37.6
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.2e-10 71.6 78 46.2
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-10 71.2 343 24.5
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-10 71.2 362 27.1
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-10 69.7 79 41.8
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 4.7e-10 69.7 83 38.6
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.7e-10 69.7 77 45.5
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.9e-10 68.9 80 41.2
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.8e-09 67.8 83 37.3
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.8e-09 67.8 83 37.3
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 1.8e-09 67.8 83 37.3
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.8e-09 67.8 83 37.3
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-09 67.8 77 45.5
Dinv22725 Davidia involucrata HOM05D009581 ORTHO05D004107 3.0e-09 67.0 66 47.0
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 3.9e-09 66.6 77 45.5
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.7e-09 65.9 127 31.5
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.7e-09 65.9 213 29.1
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-09 65.5 88 40.9
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 8.8e-09 65.5 88 40.9
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-09 65.5 88 40.9
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 8.8e-09 65.5 83 36.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 8.8e-09 65.5 88 40.9
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 1.1e-08 65.1 83 36.1
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-08 65.1 77 44.2
Dinv14622 Davidia involucrata HOM05D015629 ORTHO05D004107 2.0e-08 64.3 65 49.2
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-08 64.3 88 40.9
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 2.6e-08 63.9 77 42.9
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 4.4e-08 63.2 76 40.8
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.4e-08 62.4 85 42.4
Nitab4.5_0008075g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.4e-08 62.4 213 29.1
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.4e-08 62.4 230 27.8
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 9.7e-08 62.0 77 44.2
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-07 61.6 205 27.3
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-07 61.6 76 40.8
Sopen04g023700 Solanum pennellii HOM05D010431 ORTHO05D051313 1.7e-07 61.2 111 43.2
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-07 60.8 89 40.4
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 2.8e-07 60.5 232 28.4
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 3.7e-07 60.1 56 46.4
Dinv32175 Davidia involucrata HOM05D015629 ORTHO05D004107 4.8e-07 59.7 65 46.2
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.8e-07 59.7 365 26.0
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.8e-07 59.7 77 40.3
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 4.8e-07 59.7 228 26.3
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 6.3e-07 59.3 92 35.9
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 1.1e-06 58.5 77 36.4
Dinv05647 Davidia involucrata HOM05D009581 ORTHO05D004107 1.1e-06 58.5 88 39.8
PGSC0003DMG400037047 Solanum tuberosum HOM05D022799 ORTHO05D026034 1.1e-06 58.5 53 58.5
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.4e-06 58.2 341 27.0
Dinv41030 Davidia involucrata HOM05D009581 ORTHO05D004107 2.4e-06 57.4 67 43.3
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-06 57.4 65 44.6
Dinv39745 Davidia involucrata HOM05D009581 ORTHO05D004107 3.1e-06 57.0 67 43.3
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 3.1e-06 57.0 94 37.2
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 4.1e-06 56.6 77 42.9
Solyc02g031700.3 Solanum lycopersicum HOM05D010431 ORTHO05D030636 4.1e-06 56.6 53 62.3
Dinv29333 Davidia involucrata HOM05D000017 ORTHO05D000013 5.3e-06 56.2 65 43.1
Nitab4.5_0003808g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.3e-06 56.2 80 38.8
Solyc11g065330.1 Solanum lycopersicum HOM05D010431 ORTHO05D010855 5.3e-06 56.2 45 68.9
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 9.1e-06 55.5 61 45.9


User provided reference genes

Program Settings