Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400035934 Solanum tuberosum HOM05D000021 ORTHO05D012344 5.1e-87 325.5 352 100.0
CAN.G404.46 Capsicum annuum HOM05D000021 ORTHO05D000010 3.0e-26 123.6 86 89.5
CAN.G1286.15 Capsicum annuum HOM05D000021 ORTHO05D000010 3.9e-26 123.2 98 68.4
Nitab4.5_0002458g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 6.6e-26 122.5 296 84.1
CAN.G189.5 Capsicum annuum HOM05D000021 ORTHO05D000010 3.3e-25 120.2 87 71.3
CAN.G1212.1 Capsicum annuum HOM05D000021 ORTHO05D000010 9.5e-25 118.6 95 75.8
CAN.G189.1 Capsicum annuum HOM05D000021 ORTHO05D000010 9.5e-25 118.6 120 63.3
CAN.G1212.10 Capsicum annuum HOM05D000185 ORTHO05D000105 1.2e-24 118.2 98 74.5
CAN.G1505.7 Capsicum annuum HOM05D000021 ORTHO05D000010 3.6e-24 116.7 96 66.7
PGSC0003DMG400026749 Solanum tuberosum HOM05D000021 ORTHO05D000010 4.7e-24 116.3 95 73.7
CAN.G801.25 Capsicum annuum HOM05D000021 ORTHO05D000010 6.2e-24 115.9 121 63.6
CAN.G647.6 Capsicum annuum HOM05D000021 ORTHO05D000010 1.4e-23 114.8 96 74.0
Nitab4.5_0003843g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.4e-23 114.8 92 77.2
CAN.G189.25 Capsicum annuum HOM05D000021 ORTHO05D000010 4.0e-23 113.2 96 71.9
CAN.G404.23 Capsicum annuum HOM05D000021 ORTHO05D000010 4.0e-23 113.2 289 52.2
CAN.G1195.4 Capsicum annuum HOM05D000021 ORTHO05D000010 5.2e-23 112.8 94 77.7
CAN.G647.12 Capsicum annuum HOM05D000021 ORTHO05D000010 6.8e-23 112.5 96 64.6
CAN.G189.3 Capsicum annuum HOM05D000021 ORTHO05D000010 8.9e-23 112.1 94 71.3
Nitab4.5_0002177g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.2e-22 111.7 84 78.6
CAN.G824.12 Capsicum annuum HOM05D000021 ORTHO05D000010 1.5e-22 111.3 96 69.8
CAN.G866.12 Capsicum annuum HOM05D000021 ORTHO05D000010 2.0e-22 110.9 96 74.0
CAN.G1286.25 Capsicum annuum HOM05D000021 ORTHO05D000010 3.4e-22 110.2 313 52.7
CAN.G866.22 Capsicum annuum HOM05D000021 ORTHO05D000010 3.4e-22 110.2 290 80.3
CAN.G1372.17 Capsicum annuum HOM05D000021 ORTHO05D000010 4.4e-22 109.8 88 75.0
CAN.G1569.24 Capsicum annuum HOM05D000021 ORTHO05D000010 4.4e-22 109.8 91 71.4
CAN.G404.18 Capsicum annuum HOM05D000021 ORTHO05D000010 4.4e-22 109.8 98 68.4
CAN.G638.10 Capsicum annuum HOM05D000021 ORTHO05D000010 4.4e-22 109.8 96 67.7
CAN.G783.13 Capsicum annuum HOM05D000002 ORTHO05D000010 4.4e-22 109.8 89 67.4
CAN.G783.17 Capsicum annuum HOM05D000021 ORTHO05D000010 9.8e-22 108.6 96 65.6
Nitab4.5_0000462g0170 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.2e-21 107.5 95 63.2
CAN.G189.7 Capsicum annuum HOM05D000021 ORTHO05D000010 2.9e-21 107.1 94 67.0
CAN.G730.39 Capsicum annuum HOM05D000021 ORTHO05D000010 3.7e-21 106.7 86 77.9
CAN.G354.60 Capsicum annuum HOM05D000021 ORTHO05D000010 6.4e-21 105.9 287 84.0
CAN.G354.8 Capsicum annuum HOM05D000021 ORTHO05D000010 1.1e-20 105.1 86 70.9
Solyc03g006100.4 Solanum lycopersicum HOM05D000021 ORTHO05D000010 1.1e-20 105.1 315 78.4
CAN.G1212.20 Capsicum annuum HOM05D000021 ORTHO05D000010 1.4e-20 104.8 96 57.3
CAN.G638.9 Capsicum annuum HOM05D000021 ORTHO05D000010 2.4e-20 104.0 98 65.3
Nitab4.5_0002177g0080 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.4e-20 104.0 96 62.5
CAN.G189.68 Capsicum annuum HOM05D000021 ORTHO05D000010 4.1e-20 103.2 88 64.8
Nitab4.5_0002177g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 4.1e-20 103.2 96 63.5
CAN.G801.22 Capsicum annuum HOM05D000021 ORTHO05D000010 9.2e-20 102.1 296 39.5
CAN.G866.13 Capsicum annuum HOM05D000021 ORTHO05D000010 2.7e-19 100.5 96 70.8
Nitab4.5_0002177g0170 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.3e-18 98.2 277 78.7
CAN.G1537.4 Capsicum annuum HOM05D000021 ORTHO05D000010 6.6e-18 95.9 285 86.3
Nitab4.5_0003843g0020 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.1e-17 95.1 95 67.4
Nitab4.5_0000462g0090 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.5e-17 94.7 85 62.4
Solyc03g006080.4 Solanum lycopersicum HOM05D000021 ORTHO05D000010 5.6e-17 92.8 88 71.6
Nitab4.5_0004221g0060 Nicotiana tabacum HOM05D000021 ORTHO05D012344 7.3e-17 92.4 99 67.7
CAN.G411.84 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-16 91.7 99 66.7
CAN.G647.34 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-16 91.7 276 64.1
Nitab4.5_0000462g0180 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.2e-16 91.7 85 71.8
CAN.G783.27 Capsicum annuum HOM05D000021 ORTHO05D000010 3.6e-16 90.1 98 63.3
CAN.G783.11 Capsicum annuum HOM05D000021 ORTHO05D000010 6.2e-16 89.4 85 71.8
CAN.G404.27 Capsicum annuum HOM05D000021 ORTHO05D000010 1.1e-15 88.6 71 77.5
CAN.G189.69 Capsicum annuum HOM05D000021 ORTHO05D000010 1.8e-15 87.8 86 62.8
CAN.G866.8 Capsicum annuum HOM05D000002 ORTHO05D000010 1.8e-15 87.8 98 59.2
Nitab4.5_0001816g0120 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.3e-15 87.4 85 69.4
CAN.G189.39 Capsicum annuum HOM05D000021 ORTHO05D000010 8.9e-15 85.5 90 57.8
CAN.G160.36 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-14 85.1 96 61.5
CAN.G866.20 Capsicum annuum HOM05D000021 ORTHO05D000010 1.5e-14 84.7 86 61.6
CAN.G1943.6 Capsicum annuum HOM05D000021 ORTHO05D000010 2.6e-14 84.0 85 69.4
CAN.G1505.11 Capsicum annuum HOM05D000021 ORTHO05D000010 4.4e-14 83.2 86 64.0
CAN.G647.25 Capsicum annuum HOM05D000021 ORTHO05D000010 5.8e-14 82.8 83 56.6
CAN.G189.11 Capsicum annuum HOM05D000021 ORTHO05D024768 7.5e-14 82.4 94 67.0
CAN.G783.16 Capsicum annuum HOM05D000021 ORTHO05D000010 1.9e-12 77.8 47 83.0
Peaxi162Scf00734g00034 Petunia axillaris HOM05D000021 ORTHO05D000010 7.1e-12 75.9 84 65.5
CAN.G866.1 Capsicum annuum HOM05D000021 ORTHO05D000010 1.6e-11 74.7 46 76.1
PGSC0003DMG401026747 Solanum tuberosum HOM05D000021 ORTHO05D024768 1.6e-11 74.7 55 67.3
CAN.G404.16 Capsicum annuum HOM05D000021 ORTHO05D000010 2.1e-11 74.3 96 54.2
CAN.G189.15 Capsicum annuum HOM05D000021 ORTHO05D000010 2.7e-11 73.9 85 58.8
Solyc03g006030.4 Solanum lycopersicum HOM05D000021 ORTHO05D000010 2.7e-11 73.9 289 78.5
PGSC0003DMG400026748 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.7e-11 73.9 86 60.5
Nitab4.5_0001265g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 4.6e-11 73.2 93 60.2
CAN.G638.12 Capsicum annuum HOM05D000021 ORTHO05D000010 6.0e-11 72.8 65 58.5
CAN.G647.17 Capsicum annuum HOM05D000021 ORTHO05D000010 1.0e-10 72.0 47 72.3
CAN.G647.30 Capsicum annuum HOM05D000021 ORTHO05D000010 1.3e-10 71.6 52 67.3
CAN.G189.20 Capsicum annuum HOM05D000021 ORTHO05D000010 1.7e-10 71.2 92 57.6
PGSC0003DMG400020697 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.7e-10 71.2 88 60.2
CAN.G866.10 Capsicum annuum HOM05D000021 ORTHO05D000010 3.0e-10 70.5 73 56.2
CAN.G647.13 Capsicum annuum HOM05D000021 ORTHO05D000010 5.1e-10 69.7 94 55.3
CAN.G783.19 Capsicum annuum HOM05D000004 ORTHO05D000002 5.1e-10 69.7 62 59.7
Peaxi162Scf00193g00220 Petunia axillaris HOM05D000021 ORTHO05D000010 6.6e-10 69.3 64 43.8
CAN.G404.22 Capsicum annuum HOM05D000021 ORTHO05D000010 1.1e-09 68.6 45 77.8
Sopen03g002040 Solanum pennellii HOM05D000021 ORTHO05D000010 1.1e-09 68.6 87 58.6
CAN.G189.17 Capsicum annuum HOM05D000021 ORTHO05D000010 1.5e-09 68.2 53 64.2
CAN.G1537.10 Capsicum annuum HOM05D000021 ORTHO05D000010 2.5e-09 67.4 54 77.8
Nitab4.5_0000005g0260 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.3e-09 67.0 120 42.5
Nitab4.5_0003268g0080 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.3e-09 67.0 88 52.3
Sabra11G0049400 Salix brachista HOM05D000021 ORTHO05D000010 3.3e-09 67.0 88 61.4
CAN.G189.23 Capsicum annuum HOM05D000021 ORTHO05D024768 7.3e-09 65.9 44 68.2
Sabra11G0051200 Salix brachista HOM05D000021 ORTHO05D000010 9.5e-09 65.5 88 59.1
CAN.G189.12 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-08 65.1 55 76.4
CAN.G189.16 Capsicum annuum HOM05D000021 ORTHO05D000010 1.6e-08 64.7 35 82.9
CAN.G189.27 Capsicum annuum HOM05D000021 ORTHO05D000002 1.6e-08 64.7 35 82.9
CAN.G638.6 Capsicum annuum HOM05D000021 ORTHO05D000010 1.6e-08 64.7 37 81.1
CAN.G1372.14 Capsicum annuum HOM05D000185 ORTHO05D000105 2.1e-08 64.3 35 85.7
CAN.G189.24 Capsicum annuum HOM05D000021 ORTHO05D000010 2.1e-08 64.3 35 85.7
Peaxi162Scf00538g00130 Petunia axillaris HOM05D012045 ORTHO05D012344 2.1e-08 64.3 81 53.1
CAN.G647.39 Capsicum annuum HOM05D000021 ORTHO05D000010 4.7e-08 63.2 53 71.7
Migut.G01178 Erythranthe guttata HOM05D000021 ORTHO05D000010 4.7e-08 63.2 90 54.4
CAN.G1286.19 Capsicum annuum HOM05D000021 ORTHO05D000010 6.2e-08 62.8 52 71.2
CAN.G638.13 Capsicum annuum HOM05D000021 ORTHO05D000010 6.2e-08 62.8 54 72.2
Cc08_g10210 Coffea canephora HOM05D000021 ORTHO05D000010 6.2e-08 62.8 70 54.3
Nitab4.5_0001038g0050 Nicotiana tabacum HOM05D000021 ORTHO05D000010 6.2e-08 62.8 97 50.5
Oeu056112.2 Olea europaea HOM05D000021 ORTHO05D000010 6.2e-08 62.8 63 52.4
CAN.G189.36 Capsicum annuum HOM05D000021 ORTHO05D115012 8.1e-08 62.4 55 72.7
CAN.G354.5 Capsicum annuum HOM05D000021 ORTHO05D000010 1.1e-07 62.0 45 68.9
Gohir.A01G051700 Gossypium hirsutum HOM05D000021 ORTHO05D000010 1.1e-07 62.0 121 45.5
CAN.G1286.22 Capsicum annuum HOM05D018613 ORTHO05D000010 1.4e-07 61.6 35 82.9
CAN.G189.41 Capsicum annuum HOM05D000021 ORTHO05D000010 1.4e-07 61.6 35 80.0
CAN.G404.31 Capsicum annuum HOM05D000021 ORTHO05D000010 1.4e-07 61.6 44 68.2
Migut.H01425 Erythranthe guttata HOM05D000021 ORTHO05D000010 1.8e-07 61.2 91 53.8
TWI77G0306 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 2.3e-07 60.8 90 41.1
CAN.G866.11 Capsicum annuum HOM05D000021 ORTHO05D000010 3.1e-07 60.5 35 80.0
CAN.G638.4 Capsicum annuum HOM05D000021 ORTHO05D000010 5.2e-07 59.7 41 73.2
Ciclev10018659m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.2e-07 59.7 90 55.6
Nitab4.5_0004712g0060 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.2e-07 59.7 102 44.1
arahy.Tifrunner.gnm1.ann1.F7SJE8 Arachis hypogaea HOM05D000021 ORTHO05D000010 6.8e-07 59.3 87 41.4
CiPaw.10G105000 Carya illinoinensis HOM05D000021 ORTHO05D000010 6.8e-07 59.3 62 53.2
vmacro09400 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 6.8e-07 59.3 61 49.2
CAN.G1394.26 Capsicum annuum HOM05D000021 ORTHO05D000010 8.9e-07 58.9 68 50.0
Gohir.A01G049266 Gossypium hirsutum HOM05D000021 ORTHO05D000010 8.9e-07 58.9 104 38.5
Medtr6g040210 Medicago truncatula HOM05D000021 ORTHO05D000010 8.9e-07 58.9 67 46.3
CAN.G289.63 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-06 58.5 42 69.0
Nitab4.5_0000462g0130 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.2e-06 58.5 53 69.8
GSVIVG01020735001 Vitis vinifera HOM05D000021 ORTHO05D440116 1.2e-06 58.5 58 55.2
COL.COLO4_27016 Corchorus olitorius HOM05D000021 ORTHO05D000010 1.5e-06 58.2 61 45.9
Peaxi162Scf00242g00015 Petunia axillaris HOM05D000021 ORTHO05D000010 1.5e-06 58.2 36 77.8
Haze_17211 Corylus avellana HOM05D000021 ORTHO05D000010 2.0e-06 57.8 61 47.5
QL03p025853 Quercus lobata HOM05D000021 ORTHO05D000010 2.6e-06 57.4 87 57.5
Hund20897 Selenicereus undatus HOM05D000021 ORTHO05D000010 2.6e-06 57.4 123 44.7
PGSC0003DMG400012514 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.6e-06 57.4 52 61.5
CAN.G189.26 Capsicum annuum HOM05D000021 ORTHO05D000010 3.4e-06 57.0 53 56.6
CAN.G404.29 Capsicum annuum HOM05D000021 ORTHO05D000010 3.4e-06 57.0 90 43.3
MD05G1075900 Malus domestica HOM05D000021 ORTHO05D000010 3.4e-06 57.0 63 54.0
Nitab4.5_0005928g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.4e-06 57.0 37 70.3
CAN.G866.17 Capsicum annuum HOM05D000021 ORTHO05D000010 4.4e-06 56.6 35 77.1
Gorai.011G040400 Gossypium raimondii HOM05D000021 ORTHO05D000010 4.4e-06 56.6 64 43.8
Hund20882 Selenicereus undatus HOM05D000021 ORTHO05D000010 4.4e-06 56.6 139 39.6
Ciclev10014011m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.8e-06 56.2 63 38.1
CAN.G189.19 Capsicum annuum HOM05D000021 ORTHO05D115818 7.6e-06 55.8 34 76.5
Lj4P570T4 Lonicera japonica HOM05D000021 ORTHO05D000010 7.6e-06 55.8 96 39.6
Peaxi162Scf00053g00526 Petunia axillaris HOM05D000021 ORTHO05D016947 7.6e-06 55.8 54 42.6
Peaxi162Scf00102g01243 Petunia axillaris HOM05D000021 ORTHO05D000010 7.6e-06 55.8 54 68.5
Cc05_g00270 Coffea canephora HOM05D000021 ORTHO05D000010 9.9e-06 55.5 92 51.1
Migut.K00604 Erythranthe guttata HOM05D000021 ORTHO05D000010 9.9e-06 55.5 90 53.3
Nitab4.5_0001816g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 9.9e-06 55.5 34 67.6
TWI14G1242 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 9.9e-06 55.5 63 44.4
unitig_578.g16029 Utricularia gibba HOM05D012045 ORTHO05D012344 9.9e-06 55.5 60 41.7


User provided reference genes

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