Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400035925 Solanum tuberosum HOM05D005152 ORTHO05D006162 1.3e-61 239.6 123 100.0
PGSC0003DMG400017379 Solanum tuberosum HOM05D005152 ORTHO05D006162 1.2e-51 206.5 120 90.0
Sopen07g023910 Solanum pennellii HOM05D005152 ORTHO05D006162 1.3e-50 203.0 120 88.3
Solyc07g045370.3 Solanum lycopersicum HOM05D005152 ORTHO05D006162 1.7e-50 202.6 120 87.5
CAN.G1514.1 Capsicum annuum HOM05D005152 ORTHO05D006162 8.4e-45 183.7 120 83.3
Peaxi162Scf00014g00212 Petunia axillaris HOM05D005152 ORTHO05D006162 5.4e-44 181.0 118 78.8
Nitab4.5_0000975g0020 Nicotiana tabacum HOM05D005152 ORTHO05D006162 1.1e-33 146.7 120 68.3
Nitab4.5_0000236g0070 Nicotiana tabacum HOM05D005152 ORTHO05D006162 2.5e-33 145.6 120 69.2
Dinv36154 Davidia involucrata HOM05D005152 ORTHO05D006162 1.2e-19 100.1 117 47.9
Rhsim13G0207600 Rhododendron simsii HOM05D005152 ORTHO05D006162 1.2e-19 100.1 118 45.8
Gohir.A03G000034 Gossypium hirsutum HOM05D005152 ORTHO05D006162 3.3e-17 92.0 113 44.2
Gohir.D03G176100 Gossypium hirsutum HOM05D005152 ORTHO05D006162 5.7e-17 91.3 113 44.2
Gorai.003G185300 Gossypium raimondii HOM05D005152 ORTHO05D006162 5.7e-17 91.3 113 44.2
QL01p016753 Quercus lobata HOM05D005152 ORTHO05D006162 5.7e-17 91.3 117 44.4
Haze_23256 Corylus avellana HOM05D005152 ORTHO05D006162 1.7e-16 89.7 116 45.7
vmacro12803 Vaccinium macrocarpon HOM05D005152 ORTHO05D006162 2.2e-16 89.4 114 42.1
Ciclev10014592m.g Citrus clementina HOM05D005152 ORTHO05D006162 2.8e-16 89.0 116 42.2
Actinidia24470 Actinidia chinensis HOM05D005152 ORTHO05D006162 3.7e-16 88.6 116 44.8
COL.COLO4_16941 Corchorus olitorius HOM05D005152 ORTHO05D006162 6.3e-16 87.8 113 40.7
Oeu046802.1 Olea europaea HOM05D005152 ORTHO05D006162 8.2e-16 87.4 97 49.5
Thecc.03G310200 Theobroma cacao HOM05D005152 ORTHO05D006162 1.1e-15 87.0 117 40.2
GSVIVG01029300001 Vitis vinifera HOM05D005152 ORTHO05D006162 1.4e-15 86.7 113 45.1
Hma1.2p1_0460F.1_g157490 Hydrangea macrophylla HOM05D005152 ORTHO05D006162 2.4e-15 85.9 93 50.5
Duzib205G1611 Durio zibethinus HOM05D005152 ORTHO05D006162 3.1e-15 85.5 113 41.6
Atru.chr11.1591 Acer truncatum HOM05D005152 ORTHO05D006162 4.1e-15 85.1 113 42.5
MSTRG.20931 Avicennia marina HOM05D005152 ORTHO05D006162 6.9e-15 84.3 115 40.9
SalBow4G0649 Salvia bowleyana HOM05D005152 ORTHO05D006162 1.2e-14 83.6 115 41.7
Lalb_Chr10g0106191 Lupinus albus HOM05D005152 ORTHO05D006162 4.5e-14 81.6 117 40.2
Cfa009894 Carpinus fangiana HOM05D005152 ORTHO05D006162 5.9e-14 81.3 88 50.0
EL10Ac4g10101 Beta vulgaris HOM05D005152 ORTHO05D006162 7.7e-14 80.9 110 40.9
Oeu022376.1 Olea europaea HOM05D005152 ORTHO05D006162 7.7e-14 80.9 115 42.6
TAR636G3031 Trochodendron aralioides HOM05D005152 ORTHO05D006162 1.7e-13 79.7 122 39.3
Migut.A00480 Erythranthe guttata HOM05D005152 ORTHO05D006162 2.2e-13 79.3 117 35.9
DCAR_002098 Daucus carota HOM05D005152 ORTHO05D006162 3.8e-13 78.6 92 48.9
Phvul.008G202300 Phaseolus vulgaris HOM05D005152 ORTHO05D006162 3.8e-13 78.6 113 42.5
Sabra09G0050800 Salix brachista HOM05D005152 ORTHO05D006162 3.8e-13 78.6 109 43.1
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea HOM05D005152 ORTHO05D006162 8.5e-13 77.4 113 43.4
Cc02_g30140 Coffea canephora HOM05D005152 ORTHO05D006162 8.5e-13 77.4 109 42.2
Psat2g020920 Pisum sativum HOM05D005152 ORTHO05D006162 8.5e-13 77.4 116 41.4
LjContig00564g0003451 Lotus japonicus HOM05D005152 ORTHO05D006162 1.1e-12 77.0 115 42.6
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea HOM05D005152 ORTHO05D006162 1.4e-12 76.6 113 42.5
Ca_06203_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 2.5e-12 75.9 116 38.8
Ca_06206_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 2.5e-12 75.9 116 38.8
Medtr5g089190 Medicago truncatula HOM05D005152 ORTHO05D006162 3.2e-12 75.5 106 44.3
Prupe.3G132200 Prunus persica HOM05D005152 ORTHO05D006162 3.2e-12 75.5 115 40.9
Prupe.4G267500 Prunus persica HOM05D005152 ORTHO05D006162 4.2e-12 75.1 99 43.4
Potri.001G273600 Populus trichocarpa HOM05D005152 ORTHO05D006162 5.5e-12 74.7 90 48.9
Sc09g0005710 Simmondsia chinensis HOM05D005152 ORTHO05D006162 9.4e-12 73.9 114 36.8
Atru.chr10.529 Acer truncatum HOM05D005152 ORTHO05D006162 1.6e-11 73.2 89 42.7
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 1.6e-11 73.2 114 39.5
VMungo0647G0059 Vigna mungo HOM05D005152 ORTHO05D006162 2.1e-11 72.8 116 39.7
AUR62006555 Chenopodium quinoa HOM05D005152 ORTHO05D006162 2.7e-11 72.4 96 40.6
TPR.G16391 Trifolium pratense HOM05D005152 ORTHO05D006162 4.7e-11 71.6 90 44.4
TWI75G0576 Tripterygium wilfordii HOM05D005152 ORTHO05D006162 4.7e-11 71.6 90 44.4
Lsat_1_v5_gn_2_33000 Lactuca sativa HOM05D005152 ORTHO05D006162 6.1e-11 71.2 98 41.8
Manes.02G136600 Manihot esculenta HOM05D005152 ORTHO05D006162 6.1e-11 71.2 92 45.7
Hund07432 Selenicereus undatus HOM05D005152 ORTHO05D006162 6.1e-11 71.2 110 37.3
Eucgr.J00691 Eucalyptus grandis HOM05D005152 ORTHO05D006162 7.9e-11 70.9 112 39.3
Glyma.14G036100 Glycine max HOM05D005152 ORTHO05D006162 7.9e-11 70.9 113 42.5
CiPaw.14G111400 Carya illinoinensis HOM05D005152 ORTHO05D006162 1.0e-10 70.5 114 38.6
FAN04G0382 Fragaria x ananassa HOM05D005152 ORTHO05D006162 1.4e-10 70.1 116 37.1
FvH4_5g29960 Fragaria vesca HOM05D005152 ORTHO05D006162 1.8e-10 69.7 116 37.9
Glyma.02G278500 Glycine max HOM05D005152 ORTHO05D006162 1.8e-10 69.7 86 47.7
FAN13G1175 Fragaria x ananassa HOM05D005152 ORTHO05D006162 2.3e-10 69.3 116 36.2
Potri.009G067800 Populus trichocarpa HOM05D005152 ORTHO05D006162 2.3e-10 69.3 93 44.1
MD08G1241200 Malus domestica HOM05D005152 ORTHO05D006162 3.0e-10 68.9 92 41.3
HanXRQChr14g0432261 Helianthus annuus HOM05D005152 ORTHO05D006162 3.9e-10 68.6 86 43.0
MD15G1434100 Malus domestica HOM05D005152 ORTHO05D006162 6.7e-10 67.8 90 42.2
RcHm_v2.0_Chr7g0223811 Rosa chinensis HOM05D005152 ORTHO05D006162 8.8e-10 67.4 113 38.9
CANSAT11G0534 Cannabis sativa HOM05D005152 ORTHO05D006162 1.5e-09 66.6 86 44.2
THA.LOC104816332 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 1.5e-09 66.6 86 44.2
AUR62000209 Chenopodium quinoa HOM05D005152 ORTHO05D006162 2.0e-09 66.2 98 38.8
FAN08G2618 Fragaria x ananassa HOM05D005152 ORTHO05D006162 2.0e-09 66.2 99 39.4
FAN18G0878 Fragaria x ananassa HOM05D005152 ORTHO05D006162 2.0e-09 66.2 134 33.6
Atru.chr11.1398 Acer truncatum HOM05D005152 ORTHO05D006162 3.3e-09 65.5 83 43.4
Cpa.g.c26789.2 Carica papaya HOM05D005152 ORTHO05D006162 3.3e-09 65.5 90 41.1
CARHR200900 Cardamine hirsuta HOM05D005152 ORTHO05D006162 4.4e-09 65.1 86 40.7
Thhalv10012989m.g Eutrema salsugineum HOM05D005152 ORTHO05D006162 4.4e-09 65.1 86 40.7
THA.LOC104799141 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 4.4e-09 65.1 87 42.5
Aqoxy7G02965 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 5.7e-09 64.7 94 41.5
Sp6g31420 Schrenkiella parvula HOM05D005152 ORTHO05D006162 5.7e-09 64.7 86 41.9
AL6G23010 Arabidopsis lyrata HOM05D005152 ORTHO05D006162 7.4e-09 64.3 86 41.9
AT5G12220 Arabidopsis thaliana HOM05D005152 ORTHO05D006162 9.7e-09 63.9 86 41.9
Carub.0006s1072 Capsella rubella HOM05D005152 ORTHO05D006162 9.7e-09 63.9 86 41.9
Aqoxy1G00386 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 1.3e-08 63.5 94 41.5
Aa31LG3G15010 Aethionema arabicum HOM05D005152 ORTHO05D006162 6.3e-08 61.2 86 39.5
ECA238G0396 Erigeron canadensis HOM05D005152 ORTHO05D006162 8.2e-08 60.8 85 38.8
BolC3t13143H Brassica oleracea HOM05D005152 ORTHO05D006162 1.4e-07 60.1 86 43.0
A03p05460 Brassica napus HOM05D005152 ORTHO05D006162 1.8e-07 59.7 86 41.9
BraA03t09884Z Brassica rapa HOM05D005152 ORTHO05D006162 1.8e-07 59.7 86 41.9
Nn7g36798 Nelumbo nucifera HOM05D005152 ORTHO05D006162 2.4e-07 59.3 119 33.6
C03p06370 Brassica napus HOM05D005152 ORTHO05D006162 3.1e-07 58.9 86 40.7
A02p39210 Brassica napus HOM05D005152 ORTHO05D006162 4.1e-07 58.5 86 41.9
CsaV3_6G038870 Cucumis sativus L. HOM05D005152 ORTHO05D006162 4.1e-07 58.5 89 39.3
Sed0006572 Sechium edule HOM05D005152 ORTHO05D006162 5.3e-07 58.2 89 39.3
BcaB01g05418 Brassica carinata HOM05D005152 ORTHO05D006162 7.0e-07 57.8 82 41.5
ClCG02G022750 Citrullus lanatus HOM05D005152 ORTHO05D006162 7.0e-07 57.8 87 40.2
MELO3C014552.2 Cucumis melo HOM05D005152 ORTHO05D006162 7.0e-07 57.8 89 39.3
Zm00001eb150380 Zea mays HOM05D005152 ORTHO05D006162 7.7e-06 54.3 93 36.6


User provided reference genes

Program Settings