Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 2.2e-51 205.3 100 100.0
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.2e-51 205.3 100 100.0
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.2e-51 205.3 100 100.0
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 1.6e-49 199.1 100 96.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 3.5e-49 198.0 99 96.0
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.6e-49 197.6 100 98.0
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.0e-48 196.4 99 96.0
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.0e-48 196.4 100 96.0
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.3e-48 195.3 100 96.0
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-46 189.5 124 79.8
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-46 189.5 124 79.8
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-46 189.5 124 79.8
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-46 189.5 124 79.8
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 4.7e-46 187.6 114 85.1
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 6.8e-45 183.7 112 83.0
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 6.4e-43 177.2 100 90.0
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.6e-41 172.6 94 89.4
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 6.6e-40 167.2 78 100.0
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.5e-39 165.2 81 95.1
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 1.2e-38 162.9 88 90.9
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 8.1e-38 160.2 78 97.4
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 8.9e-37 156.8 81 95.1
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 8.9e-37 156.8 81 95.1
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 8.9e-37 156.8 81 95.1
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 8.9e-37 156.8 81 95.1
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 8.9e-37 156.8 81 95.1
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 2.0e-36 155.6 97 80.4
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.0e-36 155.6 97 80.4
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 5.8e-36 154.1 82 91.5
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 7.6e-36 153.7 100 77.0
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.7e-35 152.5 115 69.6
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 2.2e-35 152.1 81 93.8
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 4.9e-35 151.0 97 78.4
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 4.9e-35 151.0 72 100.0
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.9e-34 149.1 82 89.0
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.4e-34 148.7 75 94.7
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 4.2e-34 147.9 69 100.0
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 5.4e-34 147.5 73 98.6
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 3.5e-33 144.8 74 94.6
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.7e-32 142.5 78 85.9
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 9.6e-31 136.7 85 82.4
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 6.2e-30 134.0 73 89.0
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.6e-28 128.6 91 71.4
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.4e-28 127.9 73 87.7
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.8e-27 124.8 73 86.3
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.8e-27 124.8 73 86.3
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.8e-27 124.8 73 86.3
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 8.4e-27 123.6 61 96.7
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 8.4e-27 123.6 61 96.7
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 8.4e-27 123.6 89 74.2
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.6e-25 119.4 57 94.7
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 4.6e-25 117.9 56 98.2
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 1.7e-24 115.9 74 74.3
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 2.3e-24 115.5 79 72.2
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.0e-24 115.2 56 98.2
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 1.6e-22 109.4 52 98.1
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 2.1e-22 109.0 66 80.3
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 3.6e-22 108.2 61 85.2
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 1.4e-21 106.3 65 78.5
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 4.5e-20 101.3 75 69.3
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.3e-19 99.8 60 83.3
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 2.9e-19 98.6 69 75.4
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 7.1e-18 94.0 56 80.4
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 3.5e-17 91.7 57 78.9
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 1.3e-16 89.7 54 75.9
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-16 89.0 55 76.4
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-14 82.8 65 66.2
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 2.8e-14 82.0 63 65.1
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 1.8e-13 79.3 55 74.5
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 4.0e-13 78.2 58 67.2
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 5.3e-13 77.8 51 76.5
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.2e-12 76.6 53 71.7
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 4.5e-12 74.7 52 78.8
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.3e-11 73.2 70 58.6
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.0e-08 63.5 32 87.5
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 3.0e-08 62.0 58 60.3
arahy.Tifrunner.gnm1.ann1.60YYL0 Arachis hypogaea HOM05D010190 ORTHO05D009823 8.7e-08 60.5 100 43.0
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 1.5e-07 59.7 29 86.2
arahy.Tifrunner.gnm1.ann1.9E5EUV Arachis hypogaea HOM05D000388 ORTHO05D000473 3.3e-07 58.5 62 56.5
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 3.3e-07 58.5 95 37.9
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.3e-07 58.2 27 100.0
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.3e-07 58.2 27 100.0
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.3e-07 58.2 27 100.0
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.3e-07 58.2 27 100.0
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.3e-07 58.2 27 100.0
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 4.3e-07 58.2 27 100.0
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 4.3e-07 58.2 27 100.0
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 4.3e-07 58.2 27 100.0
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 9.6e-07 57.0 65 52.3
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 2.8e-06 55.5 27 92.6
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 3.7e-06 55.1 27 96.3
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 3.7e-06 55.1 27 96.3
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-06 54.3 27 92.6


User provided reference genes

Program Settings