Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400035278 Solanum tuberosum HOM05D010533 ORTHO05D003378 3.2e-59 231.5 113 100.0
Solyc10g012110.3 Solanum lycopersicum HOM05D010533 ORTHO05D003378 2.5e-51 205.3 112 87.5
Sopen10g005870 Solanum pennellii HOM05D010533 ORTHO05D003378 5.5e-51 204.1 112 86.6
PGSC0003DMG400036647 Solanum tuberosum HOM05D010533 ORTHO05D003378 1.4e-46 189.5 113 79.6
PGSC0003DMG400041307 Solanum tuberosum HOM05D010533 ORTHO05D003378 1.9e-43 179.1 113 77.0
Solyc10g012120.1 Solanum lycopersicum HOM05D010533 ORTHO05D003378 7.2e-43 177.2 113 75.2
Sopen10g005880 Solanum pennellii HOM05D010533 ORTHO05D003378 1.2e-42 176.4 112 74.1
PGSC0003DMG400044023 Solanum tuberosum HOM05D010533 ORTHO05D003378 5.5e-35 151.0 113 66.4
Solyc10g012130.1 Solanum lycopersicum HOM05D010533 ORTHO05D003378 3.6e-34 148.3 111 66.7
Sopen10g005900 Solanum pennellii HOM05D010533 ORTHO05D003378 2.3e-33 145.6 111 64.9
CAN.G650.39 Capsicum annuum HOM05D010533 ORTHO05D003378 3.0e-33 145.2 111 65.8
PGSC0003DMG400038800 Solanum tuberosum HOM05D010533 ORTHO05D003378 1.3e-31 139.8 115 63.5
Peaxi162Scf00008g00288 Petunia axillaris HOM05D010533 ORTHO05D003378 3.7e-31 138.3 99 69.7
Peaxi162Scf00066g00202 Petunia axillaris HOM05D010533 ORTHO05D003378 4.1e-22 108.2 109 52.3
Nitab4.5_0001821g0020 Nicotiana tabacum HOM05D000275 ORTHO05D003378 2.3e-20 102.4 108 49.1
Nitab4.5_0010416g0010 Nicotiana tabacum HOM05D000275 ORTHO05D003378 5.0e-20 101.3 98 53.1
Oeu043634.1 Olea europaea HOM05D010533 ORTHO05D003378 1.6e-18 96.3 105 45.7
SalBow8G5319 Salvia bowleyana HOM05D010533 ORTHO05D003378 2.3e-17 92.4 103 42.7
Peaxi162Scf00033g00043 Petunia axillaris HOM05D000275 ORTHO05D003378 1.5e-16 89.7 111 45.9
MSTRG.7190 Avicennia marina HOM05D000275 ORTHO05D003378 1.1e-14 83.6 111 38.7
Migut.M01357 Erythranthe guttata HOM05D010533 ORTHO05D003378 1.4e-14 83.2 93 41.9
SGA_v2.0_scaffold4G01900 Striga asiatica HOM05D000275 ORTHO05D003378 1.4e-14 83.2 107 38.3
Sopen06g019870 Solanum pennellii HOM05D010533 ORTHO05D003378 1.0e-12 77.0 102 41.2
DCAR_003257 Daucus carota HOM05D006508 ORTHO05D003378 6.6e-12 74.3 110 38.2
Dinv20122 Davidia involucrata HOM05D006508 ORTHO05D003378 6.6e-12 74.3 108 38.9
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 1.1e-11 73.6 116 37.1
DCAR_013213 Daucus carota HOM05D006508 ORTHO05D003378 1.5e-11 73.2 110 37.3
Dinv07381 Davidia involucrata HOM05D006508 ORTHO05D003378 1.5e-11 73.2 108 38.0
Dinv20120 Davidia involucrata HOM05D006508 ORTHO05D003378 2.5e-11 72.4 107 38.3
Lalb_Chr12g0203601 Lupinus albus HOM05D006508 ORTHO05D003378 2.5e-11 72.4 116 36.2
Manes.16G001900 Manihot esculenta HOM05D006508 ORTHO05D003378 7.3e-11 70.9 113 38.1
Lalb_Chr12g0203591 Lupinus albus HOM05D006508 ORTHO05D003378 1.2e-10 70.1 116 35.3
CiPaw.09G100300 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.6e-10 69.7 87 37.9
PSO832G3328 Papaver somniferum HOM05D000275 ORTHO05D003378 1.6e-10 69.7 110 34.5
Actinidia12821 Actinidia chinensis HOM05D000275 ORTHO05D003378 2.1e-10 69.3 107 36.4
Haze_06883 Corylus avellana HOM05D006508 ORTHO05D003378 3.6e-10 68.6 106 36.8
Dinv20119 Davidia involucrata HOM05D006508 ORTHO05D003378 1.1e-09 67.0 103 37.9
SEGI_16300 Sequoiadendron giganteum HOM05D000275 ORTHO05D000181 1.1e-09 67.0 96 34.4
Dinv20118 Davidia involucrata HOM05D006508 ORTHO05D003378 1.4e-09 66.6 93 34.4
CANSAT56G3402 Cannabis sativa HOM05D006508 ORTHO05D003378 2.3e-09 65.9 87 40.2
Migut.M01927 Erythranthe guttata HOM05D000275 ORTHO05D010802 2.3e-09 65.9 117 37.6
Nitab4.5_0002819g0020 Nicotiana tabacum HOM05D000275 ORTHO05D010802 2.3e-09 65.9 111 42.3
Eucgr.D01379 Eucalyptus grandis HOM05D000275 ORTHO05D003378 3.1e-09 65.5 87 34.5
SGA_v2.0_scaffold51G18665 Striga asiatica HOM05D000275 ORTHO05D010802 3.1e-09 65.5 108 40.7
Lalb_Chr20g0108251 Lupinus albus HOM05D000275 ORTHO05D000181 4.0e-09 65.1 108 32.4
COL.COLO4_26711 Corchorus olitorius HOM05D006508 ORTHO05D003378 8.9e-09 63.9 110 32.7
Manes.12G053200 Manihot esculenta HOM05D006508 ORTHO05D003378 8.9e-09 63.9 117 35.9
Os06g0539500 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 8.9e-09 63.9 119 37.8
Nitab4.5_0004082g0030 Nicotiana tabacum HOM05D010533 ORTHO05D003378 1.2e-08 63.5 53 54.7
Oeu000504.1 Olea europaea HOM05D000275 ORTHO05D010802 1.2e-08 63.5 108 38.9
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 1.2e-08 63.5 107 32.7
Ah.08g209500 Amaranthus hybridus HOM05D000275 ORTHO05D000181 1.5e-08 63.2 110 33.6
Thecc.06G230400 Theobroma cacao HOM05D006508 ORTHO05D003378 1.5e-08 63.2 107 37.4
COL.COLO4_26881 Corchorus olitorius HOM05D000275 ORTHO05D010802 2.0e-08 62.8 112 33.9
COL.COLO4_26882 Corchorus olitorius HOM05D000275 ORTHO05D010802 2.0e-08 62.8 110 36.4
Manes.12G052802 Manihot esculenta HOM05D006508 ORTHO05D003378 2.0e-08 62.8 115 34.8
COL.COLO4_03647 Corchorus olitorius HOM05D006508 ORTHO05D003378 2.6e-08 62.4 84 34.5
COL.COLO4_26709 Corchorus olitorius HOM05D006508 ORTHO05D003378 2.6e-08 62.4 109 32.1
SEGI_33977 Sequoiadendron giganteum HOM05D000275 ORTHO05D000181 2.6e-08 62.4 91 34.1
Potri.011G021900 Populus trichocarpa HOM05D000275 ORTHO05D003378 3.4e-08 62.0 79 36.7
Thecc.06G008800 Theobroma cacao HOM05D000275 ORTHO05D010802 3.4e-08 62.0 106 34.9
Cpa.g.c30210.2 Carica papaya HOM05D000275 ORTHO05D010802 5.8e-08 61.2 107 32.7
Peaxi162Scf00395g00012 Petunia axillaris HOM05D000275 ORTHO05D010802 5.8e-08 61.2 111 38.7
Duzib160G0260 Durio zibethinus HOM05D000275 ORTHO05D010802 7.5e-08 60.8 106 34.0
Migut.M01353 Erythranthe guttata HOM05D006508 ORTHO05D003378 7.5e-08 60.8 110 32.7
Nitab4.5_0004734g0020 Nicotiana tabacum HOM05D000275 ORTHO05D010802 7.5e-08 60.8 111 41.4
Oeu063154.1 Olea europaea HOM05D000275 ORTHO05D010802 7.5e-08 60.8 94 39.4
Cpa.g.sc489.7 Carica papaya HOM05D000275 ORTHO05D010802 1.3e-07 60.1 107 33.6
Hma1.2p1_0660F.1_g197500 Hydrangea macrophylla HOM05D000275 ORTHO05D003378 1.3e-07 60.1 111 41.4
PSO017G4872 Papaver somniferum HOM05D000275 ORTHO05D000181 1.3e-07 60.1 115 35.7
Thecc.06G230500 Theobroma cacao HOM05D000275 ORTHO05D003378 1.3e-07 60.1 83 34.9
COL.COLO4_26721 Corchorus olitorius HOM05D006508 ORTHO05D003378 1.7e-07 59.7 110 31.8
FAN03G2574 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.7e-07 59.7 112 27.7
Haze_06893 Corylus avellana HOM05D006508 ORTHO05D003378 2.2e-07 59.3 97 36.1
Hund05143 Selenicereus undatus HOM05D000275 ORTHO05D000181 2.9e-07 58.9 108 33.3
CiPaw.09G100400 Carya illinoinensis HOM05D006508 ORTHO05D003378 3.7e-07 58.5 83 34.9
Hma1.2p1_0071F.1_g037800 Hydrangea macrophylla HOM05D000275 ORTHO05D010802 3.7e-07 58.5 111 38.7
SEGI_29008 Sequoiadendron giganteum HOM05D000275 ORTHO05D000181 3.7e-07 58.5 109 28.4
MD10G1328900 Malus domestica HOM05D000275 ORTHO05D003378 4.9e-07 58.2 113 28.3
TWI32G0556 Tripterygium wilfordii HOM05D000275 ORTHO05D010802 4.9e-07 58.2 108 33.3
TAR624G0945 Trochodendron aralioides HOM05D000275 ORTHO05D010802 4.9e-07 58.2 108 37.0
Dinv06441 Davidia involucrata HOM05D000275 ORTHO05D010802 6.4e-07 57.8 104 35.6
Lalb_Chr07g0188481 Lupinus albus HOM05D000275 ORTHO05D003378 6.4e-07 57.8 117 31.6
Manes.06G051500 Manihot esculenta HOM05D000275 ORTHO05D010802 6.4e-07 57.8 107 32.7
Lalb_Chr07g0188491 Lupinus albus HOM05D000275 ORTHO05D003378 8.3e-07 57.4 112 32.1
Medtr3g464110 Medicago truncatula HOM05D000275 ORTHO05D003378 8.3e-07 57.4 81 38.3
Rhsim05G0220000 Rhododendron simsii HOM05D000275 ORTHO05D000181 8.3e-07 57.4 107 32.7
GSVIVG01021772001 Vitis vinifera HOM05D000275 ORTHO05D010802 8.3e-07 57.4 108 34.3
Migut.M01350 Erythranthe guttata HOM05D000275 ORTHO05D003378 1.1e-06 57.0 110 32.7
Thecc.04G124500 Theobroma cacao HOM05D000275 ORTHO05D003378 1.1e-06 57.0 82 35.4
TWI38G0468 Tripterygium wilfordii HOM05D000275 ORTHO05D003378 1.1e-06 57.0 111 31.5
Manes.06G051600 Manihot esculenta HOM05D000275 ORTHO05D010802 1.4e-06 56.6 107 31.8
Medtr0071s0070 Medicago truncatula HOM05D006508 ORTHO05D003378 1.4e-06 56.6 118 32.2
Os03g0808500 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D003378 1.4e-06 56.6 93 32.3
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 1.4e-06 56.6 85 29.4
Thecc.06G230300 Theobroma cacao HOM05D000275 ORTHO05D003378 1.4e-06 56.6 83 32.5
TWI38G1593 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 1.4e-06 56.6 99 32.3
CiPaw.09G100900 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.9e-06 56.2 117 32.5
MD01G1079700 Malus domestica HOM05D000275 ORTHO05D000181 1.9e-06 56.2 113 35.4
Medtr3g046515 Medicago truncatula HOM05D006508 ORTHO05D003378 1.9e-06 56.2 87 34.5
Oeu049720.1 Olea europaea HOM05D000275 ORTHO05D003378 1.9e-06 56.2 110 35.5
Migut.M01355 Erythranthe guttata HOM05D000275 ORTHO05D003378 2.4e-06 55.8 106 31.1
SGA_v2.0_scaffold223G42879 Striga asiatica HOM05D000275 ORTHO05D010802 2.4e-06 55.8 97 41.2
FvH4_3g01190 Fragaria vesca HOM05D000275 ORTHO05D003378 3.2e-06 55.5 116 31.0
Gohir.A05G112300 Gossypium hirsutum HOM05D000275 ORTHO05D010802 3.2e-06 55.5 103 34.0
TPR.G25291 Trifolium pratense HOM05D000275 ORTHO05D003378 3.2e-06 55.5 116 32.8
TPR.G39085 Trifolium pratense HOM05D006508 ORTHO05D003378 3.2e-06 55.5 121 30.6
Gorai.001G085000 Gossypium raimondii HOM05D000275 ORTHO05D003378 4.1e-06 55.1 105 29.5
Medtr3g046580 Medicago truncatula HOM05D006508 ORTHO05D003378 4.1e-06 55.1 118 31.4
CiPaw.09G101100 Carya illinoinensis HOM05D006508 ORTHO05D003378 5.4e-06 54.7 102 29.4
Cc09_g07350 Coffea canephora HOM05D000275 ORTHO05D010802 5.4e-06 54.7 111 35.1
Gohir.D07G080100 Gossypium hirsutum HOM05D000275 ORTHO05D003378 5.4e-06 54.7 105 29.5
Manes.14G126100 Manihot esculenta HOM05D000275 ORTHO05D010802 5.4e-06 54.7 107 30.8
Medtr3g046590 Medicago truncatula HOM05D006508 ORTHO05D003378 5.4e-06 54.7 118 32.2
Nitab4.5_0016619g0010 Nicotiana tabacum HOM05D000275 ORTHO05D010802 5.4e-06 54.7 111 38.7
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 5.4e-06 54.7 85 29.4
CSS0009125 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D003378 7.1e-06 54.3 72 40.3
Cfa000104 Carpinus fangiana HOM05D006508 ORTHO05D003378 7.1e-06 54.3 112 36.6
Gohir.A07G075600 Gossypium hirsutum HOM05D000275 ORTHO05D003378 7.1e-06 54.3 107 29.0
Lsat_1_v5_gn_1_72961 Lactuca sativa HOM05D000275 ORTHO05D000181 7.1e-06 54.3 93 36.6
Manes.13G059000 Manihot esculenta HOM05D000275 ORTHO05D003378 7.1e-06 54.3 90 32.2
vmacro22562 Vaccinium macrocarpon HOM05D000275 ORTHO05D000181 7.1e-06 54.3 113 30.1
Gorai.009G117000 Gossypium raimondii HOM05D000275 ORTHO05D010802 9.2e-06 53.9 107 31.8
Medtr3g046530 Medicago truncatula HOM05D006508 ORTHO05D003378 9.2e-06 53.9 118 31.4
PGR004G2653 Punica granatum HOM05D000275 ORTHO05D000181 9.2e-06 53.9 112 31.2
HPP92_021879 Vanilla planifolia HOM05D006508 ORTHO05D003378 9.2e-06 53.9 116 31.9


User provided reference genes

Program Settings