Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-89 333.2 182 100.0
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-73 279.3 183 82.0
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-69 266.2 183 79.2
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.0e-68 260.8 169 83.4
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.2e-64 247.3 182 81.3
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-57 226.9 183 66.7
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-56 222.6 190 73.2
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.0e-51 205.3 161 65.8
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.8e-50 201.4 209 58.4
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-47 192.6 128 67.2
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.6e-46 188.0 205 56.6
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-43 179.1 190 50.0
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-43 178.3 177 62.1
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-41 172.9 215 46.0
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-39 164.5 129 81.4
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-37 158.7 126 54.0
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-35 153.3 123 53.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 2.3e-35 152.9 178 44.9
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.9e-35 151.0 115 87.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 5.8e-34 148.3 121 79.3
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 2.2e-33 146.4 129 74.4
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-33 145.2 109 72.5
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-32 144.1 113 83.2
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-32 143.7 120 80.8
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-32 141.7 107 86.0
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.2e-32 141.0 123 50.4
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-31 139.8 84 70.2
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-31 138.7 115 80.0
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 6.0e-31 138.3 115 58.3
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-30 136.7 112 65.2
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-29 132.9 115 64.3
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.3e-29 131.3 106 76.4
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 9.6e-29 131.0 63 92.1
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 3.6e-28 129.0 120 62.5
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-27 127.1 63 84.1
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-27 127.1 99 53.5
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-27 126.7 99 54.5
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-27 126.3 115 59.1
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-27 124.8 103 79.6
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-26 124.0 161 46.6
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-26 123.2 121 56.2
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.4e-26 122.5 102 53.9
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-26 121.3 63 79.4
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 3.8e-25 119.0 115 59.1
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.9e-25 118.6 125 43.2
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-24 116.3 70 68.6
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-24 115.9 88 85.2
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 4.2e-24 115.5 113 63.7
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-24 114.8 163 38.7
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 4.6e-23 112.1 121 56.2
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-23 112.1 116 48.3
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.7e-22 110.2 54 88.9
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-22 109.4 119 60.5
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 8.7e-22 107.8 115 56.5
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 3.3e-21 105.9 118 50.8
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 7.3e-21 104.8 109 54.1
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 7.3e-21 104.8 64 78.1
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-20 104.0 111 46.8
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 3.6e-20 102.4 48 89.6
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-19 99.8 119 58.0
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-19 99.8 121 57.0
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.5e-18 97.1 116 37.9
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 2.6e-18 96.3 114 39.5
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.8e-18 95.1 157 50.3
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-16 89.7 63 66.7
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-16 89.7 63 68.3
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 4.2e-16 89.0 59 74.6
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 1.2e-15 87.4 66 57.6
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-15 87.0 52 78.8
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-15 86.3 99 38.4
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-15 84.7 142 32.4
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 3.0e-14 82.8 142 31.7
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-13 80.9 97 54.6
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-13 80.5 62 54.8
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.5e-13 79.7 150 32.7
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-13 79.7 62 53.2
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 3.3e-13 79.3 152 32.2
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 4.3e-13 79.0 63 57.1
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-13 79.0 63 52.4
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.6e-13 77.8 62 50.0
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-12 77.0 44 81.8
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-12 76.3 152 31.6
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 2.8e-12 76.3 63 54.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-12 75.9 62 54.8
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-12 75.5 158 30.4
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 4.8e-12 75.5 60 56.7
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-11 74.3 225 22.2
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-11 73.6 125 32.0
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.8e-11 73.6 193 26.9
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-11 73.6 62 48.4
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-11 72.8 50 62.0
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-11 72.8 82 43.9
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 5.3e-11 72.0 150 30.0
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-11 72.0 130 32.3
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-11 71.6 60 53.3
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.0e-11 71.2 66 48.5
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-10 70.9 61 45.9
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-10 70.5 139 30.2
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.0e-10 70.1 223 23.3
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 2.0e-10 70.1 55 52.7
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.6e-10 69.7 182 26.4
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-10 69.3 51 58.8
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 3.4e-10 69.3 51 58.8
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 4.5e-10 68.9 44 77.3
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-10 68.9 56 50.0
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 67.4 182 24.7
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 1.7e-09 67.0 182 25.8
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-09 67.0 63 49.2
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 2.9e-09 66.2 182 24.2
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.8e-09 65.9 56 53.6
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 1.4e-08 63.9 85 38.8
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.9e-08 63.5 182 23.6
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 1.9e-08 63.5 103 38.8
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 3.2e-08 62.8 52 55.8
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 7.1e-08 61.6 187 25.1
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-07 60.5 70 40.0
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 2.7e-07 59.7 182 24.7
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 2.7e-07 59.7 63 44.4
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 3.5e-07 59.3 159 23.9
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 1.3e-06 57.4 164 23.2
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 1.3e-06 57.4 43 58.1
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-06 57.4 51 49.0
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.0e-06 56.2 60 43.3
Solyc09g031960.1 Solanum lycopersicum HOM05D003888 ORTHO05D391351 3.9e-06 55.8 27 85.2
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.1e-06 55.5 63 39.7
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 8.7e-06 54.7 179 26.8
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.7e-06 54.7 63 38.1


User provided reference genes

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