Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400035139 Solanum tuberosum HOM05D012079 ORTHO05D011565 6.2e-62 240.7 131 100.0
Nitab4.5_0000259g0150 Nicotiana tabacum HOM05D012079 ORTHO05D011565 2.9e-11 72.4 41 68.3
Peaxi162Scf00205g00134 Petunia axillaris HOM05D012079 ORTHO05D011565 2.9e-11 72.4 48 64.6
Peaxi162Scf00205g01428 Petunia axillaris HOM05D012079 ORTHO05D011565 2.9e-11 72.4 69 53.6
PGSC0003DMG400045879 Solanum tuberosum HOM05D013992 ORTHO05D011565 1.1e-10 70.5 41 73.2
Medtr7g055987 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-08 63.9 41 58.5
PGSC0003DMG400018170 Solanum tuberosum HOM05D013992 ORTHO05D011565 2.3e-08 62.8 39 69.2
CAN.G588.77 Capsicum annuum HOM05D013992 ORTHO05D011565 5.1e-08 61.6 60 46.7
PGSC0003DMG400005156 Solanum tuberosum HOM05D012079 ORTHO05D011565 5.1e-08 61.6 41 73.2
PGSC0003DMG400034990 Solanum tuberosum HOM05D013992 ORTHO05D011565 5.1e-08 61.6 41 68.3
CAN.G416.52 Capsicum annuum HOM05D012079 ORTHO05D011565 1.5e-07 60.1 42 64.3
FvH4_3g39990 Fragaria vesca HOM05D000007 ORTHO05D005026 3.3e-07 58.9 35 71.4
Glyma.06G181300 Glycine max HOM05D000007 ORTHO05D000017 3.3e-07 58.9 41 58.5
Medtr0128s0020 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-07 58.9 52 53.8
Glyma.05G166200 Glycine max HOM05D000007 ORTHO05D000017 4.3e-07 58.5 48 52.1
Glyma.08G134900 Glycine max HOM05D000007 ORTHO05D000017 4.3e-07 58.5 41 58.5
Medtr0464s0020 Medicago truncatula HOM05D000007 ORTHO05D000017 4.3e-07 58.5 41 56.1
Medtr3g437520 Medicago truncatula HOM05D000007 ORTHO05D000017 5.7e-07 58.2 41 56.1
PSO675G9087 Papaver somniferum HOM05D004049 ORTHO05D004496 7.4e-07 57.8 40 60.0
VMungo0464G0235 Vigna mungo HOM05D000007 ORTHO05D000017 7.4e-07 57.8 41 58.5
Medtr7g056390 Medicago truncatula HOM05D000007 ORTHO05D000017 9.7e-07 57.4 41 53.7
Glyma.05G071400 Glycine max HOM05D000007 ORTHO05D000017 1.3e-06 57.0 41 56.1
Medtr7g056290 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-06 57.0 41 53.7
Glyma.05G071700 Glycine max HOM05D000007 ORTHO05D000017 1.6e-06 56.6 41 53.7
Medtr0128s0070 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-06 56.6 52 51.9
PSO675G0425 Papaver somniferum HOM05D000007 ORTHO05D004496 1.6e-06 56.6 41 58.5
Glyma.08G353000 Glycine max HOM05D000007 ORTHO05D000017 2.2e-06 56.2 41 53.7
Medtr7g022600 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-06 56.2 41 53.7
Sc05g0008290 Simmondsia chinensis HOM05D000007 ORTHO05D000017 2.2e-06 56.2 35 65.7
Glyma.08G260800 Glycine max HOM05D000007 ORTHO05D000017 2.8e-06 55.8 40 60.0
PSO732G0178 Papaver somniferum HOM05D004049 ORTHO05D004496 2.8e-06 55.8 38 60.5
TPR.G5556 Trifolium pratense HOM05D000007 ORTHO05D000017 2.8e-06 55.8 42 54.8
Medtr5g096710 Medicago truncatula HOM05D000007 ORTHO05D000017 3.7e-06 55.5 49 51.0
PSO013G0242 Papaver somniferum HOM05D004049 ORTHO05D004496 3.7e-06 55.5 43 53.5
Medtr0242s0040 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-06 55.1 41 56.1
Medtr0242s0060 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-06 55.1 41 56.1
Phvul.003G163000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 4.8e-06 55.1 41 56.1
Psat1g005680 Pisum sativum HOM05D000007 ORTHO05D000017 4.8e-06 55.1 38 57.9
Prupe.4G237500 Prunus persica HOM05D000007 ORTHO05D005026 4.8e-06 55.1 37 62.2
Lj1g0005824 Lotus japonicus HOM05D000007 ORTHO05D000017 6.3e-06 54.7 39 53.8
Medtr1g071010 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-06 54.7 48 47.9
Medtr7g056003 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-06 54.7 41 53.7
FAN03G2862 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.2e-06 54.3 52 48.1
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 8.2e-06 54.3 41 53.7
PGSC0003DMG400046279 Solanum tuberosum HOM05D013992 ORTHO05D011565 8.2e-06 54.3 33 72.7


User provided reference genes

Program Settings