Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400034382 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.6e-103 377.9 188 100.0
PGSC0003DMG400034876 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.6e-103 377.9 188 100.0
PGSC0003DMG400039980 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.6e-103 377.9 188 100.0
PGSC0003DMG400046449 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.3e-102 375.6 188 99.5
PGSC0003DMG400043422 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.2e-74 283.5 188 82.4
PGSC0003DMG400035740 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.0e-73 280.4 152 92.8
PGSC0003DMG400046857 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.7e-65 253.1 121 99.2
PGSC0003DMG400043531 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.8e-60 235.7 121 91.7
CAN.G1131.36 Capsicum annuum HOM05D008741 ORTHO05D010787 2.3e-49 199.5 150 71.3
CAN.G170.115 Capsicum annuum HOM05D008741 ORTHO05D010787 4.0e-30 135.6 129 61.2
CAN.G836.50 Capsicum annuum HOM05D008741 ORTHO05D010787 1.2e-29 134.0 157 46.5
CAN.G546.55 Capsicum annuum HOM05D008741 ORTHO05D010787 1.7e-28 130.2 157 45.9
PGSC0003DMG400046770 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.2e-28 129.8 73 91.8
CAN.G303.25 Capsicum annuum HOM05D008741 ORTHO05D010787 1.4e-27 127.1 193 38.9
CAN.G183.6 Capsicum annuum HOM05D008741 ORTHO05D010787 1.9e-27 126.7 159 47.2
CAN.G126.3 Capsicum annuum HOM05D008741 ORTHO05D010787 2.4e-27 126.3 151 48.3
CAN.G108.14 Capsicum annuum HOM05D008741 ORTHO05D010787 5.1e-25 118.6 153 41.8
Peaxi162Scf00429g00041 Petunia axillaris HOM05D008741 ORTHO05D010787 8.6e-25 117.9 162 41.4
Peaxi162Scf00072g00004 Petunia axillaris HOM05D008741 ORTHO05D010787 1.5e-21 107.1 168 38.1
PGSC0003DMG400007751 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.4e-21 105.5 118 44.9
CAN.G1512.5 Capsicum annuum HOM05D008741 ORTHO05D010787 7.1e-19 98.2 105 41.9
PGSC0003DMG400023197 Solanum tuberosum HOM05D008741 ORTHO05D010787 9.3e-19 97.8 103 43.7
Solyc08g150122.1 Solanum lycopersicum HOM05D008741 ORTHO05D010787 2.1e-18 96.7 52 84.6
CAN.G165.9 Capsicum annuum HOM05D008741 ORTHO05D010787 1.0e-17 94.4 105 42.9
CAN.G433.7 Capsicum annuum HOM05D008741 ORTHO05D010787 1.7e-17 93.6 176 32.4
Nitab4.5_0001172g0140 Nicotiana tabacum HOM05D008741 ORTHO05D010787 3.0e-17 92.8 105 42.9
CAN.G78.19 Capsicum annuum HOM05D008741 ORTHO05D010787 9.6e-16 87.8 131 37.4
PGSC0003DMG400044755 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.8e-15 85.5 117 39.3
CAN.G1093.2 Capsicum annuum HOM05D008741 ORTHO05D010787 6.2e-15 85.1 153 35.9
PGSC0003DMG400012467 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-14 84.0 149 32.2
PGSC0003DMG400039121 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-14 84.0 176 29.0
CAN.G198.29 Capsicum annuum HOM05D008741 ORTHO05D010787 1.8e-14 83.6 157 34.4
PGSC0003DMG400038446 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.4e-14 83.2 92 45.7
PGSC0003DMG400043513 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.4e-14 83.2 125 39.2
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 9.0e-14 81.3 149 31.5
PGSC0003DMG400035832 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.5e-13 80.5 102 40.2
CAN.G2150.1 Capsicum annuum HOM05D000550 ORTHO05D000400 8.4e-12 74.7 95 46.3
SGA_v2.0_scaffold17G08080 Striga asiatica HOM05D001383 ORTHO05D000309 1.9e-11 73.6 110 38.2
DCAR_000974 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-10 70.5 75 44.0
Sopen12g021570 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-10 70.5 73 43.8
DCAR_023922 Daucus carota HOM05D001383 ORTHO05D000309 1.8e-09 67.0 75 42.7
DCAR_031437 Daucus carota HOM05D001383 ORTHO05D000309 1.8e-09 67.0 72 41.7
SGA_v2.0_scaffold1G00312 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-09 67.0 71 42.3
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 2.3e-09 66.6 94 41.5
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 2.3e-09 66.6 67 46.3
Sopen04g015170 Solanum pennellii HOM05D008741 ORTHO05D010787 2.3e-09 66.6 155 34.8
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-09 66.6 71 42.3
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-09 66.6 71 42.3
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-09 66.6 71 42.3
Solyc05g041960.1 Solanum lycopersicum HOM05D008741 ORTHO05D390761 3.0e-09 66.2 83 55.4
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 3.9e-09 65.9 78 37.2
CAN.G440.2 Capsicum annuum HOM05D008741 ORTHO05D010787 5.1e-09 65.5 131 32.1
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 5.1e-09 65.5 73 45.2
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 6.7e-09 65.1 94 40.4
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-09 65.1 109 39.4
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-09 65.1 109 39.4
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-09 65.1 71 40.8
CANSAT56G3744 Cannabis sativa HOM05D001383 ORTHO05D000309 8.7e-09 64.7 69 40.6
CANSAT80G1681 Cannabis sativa HOM05D001383 ORTHO05D000309 8.7e-09 64.7 69 40.6
QL06p049616 Quercus lobata HOM05D001383 ORTHO05D000309 8.7e-09 64.7 67 44.8
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-08 63.5 73 42.5
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.9e-08 63.5 78 35.9
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.9e-08 63.5 78 38.5
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 2.5e-08 63.2 79 41.8
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 2.5e-08 63.2 73 42.5
DCAR_026902 Daucus carota HOM05D001383 ORTHO05D000309 3.3e-08 62.8 80 41.2
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 3.3e-08 62.8 75 42.7
Peaxi162Scf00063g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-08 62.4 75 42.7
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-08 62.4 75 42.7
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-08 62.4 75 42.7
Prupe.5G025800 Prunus persica HOM05D001383 ORTHO05D000309 4.3e-08 62.4 62 45.2
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 4.3e-08 62.4 65 44.6
CAN.G475.19 Capsicum annuum HOM05D008741 ORTHO05D010787 5.6e-08 62.0 100 44.0
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 5.6e-08 62.0 63 39.7
vmacro21229 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.6e-08 62.0 66 40.9
DCAR_028616 Daucus carota HOM05D001383 ORTHO05D000309 7.4e-08 61.6 75 44.0
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.4e-08 61.6 78 38.5
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 7.4e-08 61.6 58 46.6
Migut.E00885 Erythranthe guttata HOM05D001383 ORTHO05D000309 9.6e-08 61.2 61 41.0
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.6e-08 61.2 73 38.4
Nitab4.5_0008808g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.6e-08 61.2 72 37.5
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 9.6e-08 61.2 73 41.1
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 9.6e-08 61.2 82 39.0
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 9.6e-08 61.2 63 39.7
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 1.3e-07 60.8 78 37.2
Nitab4.5_0000463g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.6e-07 60.5 72 36.1
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-07 60.5 63 39.7
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 1.6e-07 60.5 93 36.6
PGSC0003DMG400012935 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.1e-07 60.1 108 35.2
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 2.8e-07 59.7 76 44.7
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-07 59.7 78 38.5
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 2.8e-07 59.7 73 38.4
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-07 59.7 80 32.5
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-07 59.7 80 32.5
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-07 59.7 71 42.3
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-07 59.7 80 32.5
SGA_v2.0_scaffold102G29873 Striga asiatica HOM05D001383 ORTHO05D000309 2.8e-07 59.7 94 38.3
SGA_v2.0_scaffold102G29875 Striga asiatica HOM05D001383 ORTHO05D000309 2.8e-07 59.7 94 38.3
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.7e-07 59.3 95 32.6
SGA_v2.0_scaffold2426G54118 Striga asiatica HOM05D001383 ORTHO05D000309 3.7e-07 59.3 94 37.2
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 3.7e-07 59.3 85 36.5
CANSAT25G0977 Cannabis sativa HOM05D001383 ORTHO05D000309 4.8e-07 58.9 103 35.9
Gohir.A12G071433 Gossypium hirsutum HOM05D001383 ORTHO05D000309 4.8e-07 58.9 63 39.7
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 4.8e-07 58.9 73 42.5
Peaxi162Scf00884g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 4.8e-07 58.9 58 44.8
Psat3g069680 Pisum sativum HOM05D018012 ORTHO05D000309 4.8e-07 58.9 105 33.3
SGA_v2.0_scaffold54G19529 Striga asiatica HOM05D001383 ORTHO05D000309 4.8e-07 58.9 97 35.1
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 6.2e-07 58.5 92 34.8
Nitab4.5_0000052g0080 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.2e-07 58.5 66 37.9
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.1e-07 58.2 79 39.2
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 8.1e-07 58.2 70 40.0
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 8.1e-07 58.2 63 38.1
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-06 57.8 70 35.7
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 1.1e-06 57.8 73 41.1
Nitab4.5_0000100g0180 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-06 57.4 66 40.9
Nitab4.5_0000792g0240 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-06 57.4 66 37.9
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-06 57.4 70 35.7
Peaxi162Scf00147g01910 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-06 57.4 89 38.2
SGA_v2.0_scaffold18G08221 Striga asiatica HOM05D012189 ORTHO05D000309 1.4e-06 57.4 117 31.6
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 1.8e-06 57.0 53 49.1
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 1.8e-06 57.0 68 42.6
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-06 57.0 53 43.4
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 57.0 73 41.1
Gohir.D12G069001 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.4e-06 56.6 63 38.1
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.4e-06 56.6 73 41.1
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.4e-06 56.6 73 39.7
Nitab4.5_0003547g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.4e-06 56.6 71 33.8
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.4e-06 56.6 70 35.7
SGA_v2.0_scaffold10G05216 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.6 104 33.7
SGA_v2.0_scaffold13G06336 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 56.6 104 33.7
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 3.1e-06 56.2 97 35.1
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 3.1e-06 56.2 97 35.1
Gorai.008G075500 Gossypium raimondii HOM05D001383 ORTHO05D000309 3.1e-06 56.2 63 38.1
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.1e-06 56.2 102 30.4
DCAR_029935 Daucus carota HOM05D001383 ORTHO05D000309 4.0e-06 55.8 76 35.5
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.0e-06 55.8 79 34.2
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-06 55.8 77 37.7
Peaxi162Scf01021g00121 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-06 55.8 70 40.0
Prupe.3G035600 Prunus persica HOM05D001383 ORTHO05D000309 4.0e-06 55.8 48 50.0
Migut.B01125 Erythranthe guttata HOM05D001383 ORTHO05D000309 5.3e-06 55.5 66 40.9
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.3e-06 55.5 68 41.2
Lsat_1_v5_gn_2_119760 Lactuca sativa HOM05D001383 ORTHO05D000309 5.3e-06 55.5 63 39.7
Lsat_1_v5_gn_4_176701 Lactuca sativa HOM05D001383 ORTHO05D000309 5.3e-06 55.5 72 41.7
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.3e-06 55.5 70 34.3
Gohir.A01G145614 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.9e-06 55.1 75 33.3
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.9e-06 55.1 74 41.9
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 6.9e-06 55.1 56 42.9
Oeu031331.1 Olea europaea HOM05D001383 ORTHO05D000309 6.9e-06 55.1 68 36.8
Oeu045500.1 Olea europaea HOM05D001383 ORTHO05D000309 6.9e-06 55.1 68 38.2
Hma1.2p1_2672F.1_g326690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.0e-06 54.7 78 37.2
Lsat_1_v5_gn_6_80580 Lactuca sativa HOM05D001383 ORTHO05D000309 9.0e-06 54.7 53 49.1
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 9.0e-06 54.7 56 42.9
Nitab4.5_0000129g0270 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.0e-06 54.7 66 39.4
Nitab4.5_0006239g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.0e-06 54.7 63 41.3
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 9.0e-06 54.7 75 34.7
QL08p000859 Quercus lobata HOM05D022142 ORTHO05D000309 9.0e-06 54.7 77 33.8
SGA_v2.0_scaffold59G20728 Striga asiatica HOM05D001383 ORTHO05D000309 9.0e-06 54.7 67 40.3


User provided reference genes

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