Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.5e-147 526.2 266 100.0
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 4.2e-126 454.9 267 87.6
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 7.0e-89 331.3 267 68.5
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 3.8e-74 282.3 281 58.0
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.1e-73 280.8 283 58.0
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 3.9e-71 272.3 282 56.7
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.1e-71 271.9 280 55.7
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.5e-70 270.4 282 56.7
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.6e-69 266.9 282 53.9
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.7e-58 230.3 277 51.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 6.4e-58 228.4 263 53.2
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.4e-57 227.3 287 48.4
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 5.1e-55 218.8 231 56.7
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 1.1e-54 217.6 186 58.1
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 4.3e-54 215.7 186 58.6
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.3e-53 214.2 187 58.8
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.8e-53 212.2 279 49.8
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 6.2e-53 211.8 187 57.8
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 6.2e-53 211.8 187 57.2
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.1e-52 211.1 188 58.0
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.4e-52 210.7 201 55.7
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 9.0e-52 208.0 186 56.5
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 1.2e-51 207.6 186 57.5
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.6e-51 206.5 189 57.1
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 2.6e-51 206.5 230 51.7
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 3.4e-51 206.1 190 56.8
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 7.6e-51 204.9 193 54.9
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 9.9e-51 204.5 191 55.0
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 9.9e-51 204.5 257 46.7
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 2.2e-50 203.4 228 50.0
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 3.8e-50 202.6 246 50.4
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 3.8e-50 202.6 190 55.8
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 6.4e-50 201.8 187 56.1
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 8.4e-50 201.4 259 45.6
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 8.4e-50 201.4 196 54.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.1e-49 201.1 246 50.0
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 1.4e-49 200.7 188 56.9
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-49 200.7 188 54.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.4e-49 200.7 196 53.1
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.4e-49 200.7 187 56.7
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-49 199.9 188 54.3
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.2e-49 199.5 189 54.0
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.2e-49 199.5 188 53.7
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 3.2e-49 199.5 253 44.7
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 4.2e-49 199.1 254 44.9
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.5e-49 198.7 188 53.7
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.2e-48 197.6 193 53.4
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.2e-48 197.6 216 50.5
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.0e-48 195.3 188 53.2
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 6.0e-48 195.3 188 52.1
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.0e-47 194.5 188 53.2
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.0e-47 194.5 186 51.6
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.3e-47 194.1 189 53.4
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.8e-47 193.7 196 52.6
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.3e-47 193.4 187 52.4
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 2.3e-47 193.4 187 52.4
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 3.0e-47 193.0 240 47.5
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 3.9e-47 192.6 219 50.2
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 3.9e-47 192.6 189 52.4
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 5.1e-47 192.2 211 51.7
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 8.7e-47 191.4 187 51.9
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.1e-46 191.0 188 53.2
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.5e-46 190.7 188 51.1
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.9e-46 190.3 250 45.2
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 3.3e-46 189.5 187 52.9
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 9.6e-46 188.0 189 52.4
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.3e-45 187.6 189 51.9
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 3.7e-45 186.0 186 52.2
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 4.8e-45 185.7 187 54.5
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.4e-44 184.1 187 55.1
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.8e-44 183.7 218 47.7
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 2.4e-44 183.3 203 49.8
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 4.0e-44 182.6 218 47.7
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 4.0e-44 182.6 187 51.9
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 5.3e-44 182.2 229 45.0
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 3.8e-42 176.0 184 49.5
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 4.9e-42 175.6 218 44.0
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 8.4e-42 174.9 156 51.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 9.3e-41 171.4 191 49.7
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.7e-40 169.9 190 47.4
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.7e-40 169.9 223 44.4
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 7.9e-40 168.3 217 43.8
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.0e-39 167.9 190 46.8
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 1.0e-39 167.9 226 42.9
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.0e-39 167.9 188 47.9
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.3e-39 167.5 214 43.5
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.8e-39 167.2 207 44.4
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.8e-39 167.2 145 57.2
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 2.3e-39 166.8 230 41.7
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 3.9e-39 166.0 214 43.5
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 3.9e-39 166.0 214 43.5
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.5e-38 164.1 223 42.2
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 1.5e-38 164.1 236 41.5
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.9e-38 163.7 226 42.9
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.5e-38 163.3 226 42.5
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 3.3e-38 162.9 144 56.2
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 5.7e-38 162.2 185 47.6
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 6.3e-37 158.7 226 42.0
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.4e-36 157.5 162 51.9
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.5e-35 154.1 282 35.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.3e-34 151.0 189 43.4
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.6e-32 142.9 116 59.5
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 2.2e-29 133.7 176 43.2
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.7e-26 124.0 115 53.9
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.5e-26 121.7 133 46.6
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 1.1e-22 111.3 156 41.0
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.4e-22 109.4 128 49.2
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 5.7e-22 109.0 196 41.8
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.4e-20 103.6 111 48.6
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 5.3e-20 102.4 118 48.3
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 5.3e-20 102.4 118 47.5
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 2.0e-19 100.5 148 43.9
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.0e-18 98.2 121 47.1
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.6e-16 90.9 139 43.9
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.3e-15 87.0 95 49.5
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 5.2e-15 85.9 117 33.3
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 2.8e-13 80.1 146 40.4
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 3.1e-12 76.6 128 41.4


User provided reference genes

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