Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-88 327.4 178 100.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-61 240.4 157 89.2
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-45 187.2 115 96.5
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-42 176.8 140 78.6
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-41 172.9 134 83.6
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.4e-34 147.9 111 82.0
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 6.9e-32 141.4 141 52.5
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-30 137.1 92 73.9
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-29 133.7 124 53.2
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 3.2e-29 132.5 86 74.4
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.2e-29 132.1 97 63.9
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-29 132.1 99 60.6
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 9.3e-29 131.0 100 59.0
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-28 130.6 115 59.1
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-28 128.3 94 83.0
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-28 127.9 120 55.8
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-26 123.6 97 57.7
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-26 123.2 99 56.6
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.7e-26 121.7 132 48.5
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.4e-26 121.3 97 57.7
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.7e-25 119.0 99 56.6
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-25 118.6 64 95.3
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 6.3e-25 118.2 148 45.3
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 8.2e-25 117.9 96 56.2
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-23 114.0 109 57.8
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-23 113.6 85 61.2
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-23 113.2 77 70.1
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 2.6e-23 112.8 132 48.5
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-23 111.7 107 55.1
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-23 111.3 98 53.1
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-22 109.4 127 50.4
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.5e-22 107.8 97 52.6
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 9.4e-21 104.4 106 53.8
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-20 103.6 63 82.5
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.7e-20 102.8 125 44.8
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-20 102.8 85 55.3
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-20 102.8 119 47.1
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-19 99.8 65 78.5
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.7e-17 93.6 132 34.1
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-17 92.4 133 34.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 8.2e-17 91.3 62 74.2
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.2e-17 91.3 76 53.9
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-16 90.5 79 53.2
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-16 89.7 93 49.5
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 1.2e-15 87.4 140 35.0
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.2e-15 87.4 103 45.6
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 2.0e-15 86.7 61 60.7
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-15 85.9 62 61.3
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 5.9e-15 85.1 140 34.3
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 2.2e-14 83.2 65 60.0
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-13 80.9 96 43.8
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-13 80.5 73 49.3
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 2.5e-13 79.7 109 42.2
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.2e-13 79.0 129 31.0
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-13 78.2 62 53.2
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 9.4e-13 77.8 94 41.5
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.4e-13 77.8 63 55.6
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-13 77.8 69 49.3
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 2.1e-12 76.6 98 38.8
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 2.1e-12 76.6 97 39.2
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-12 76.6 69 49.3
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 2.7e-12 76.3 60 58.3
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-12 76.3 62 54.8
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.6e-12 75.9 62 54.8
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.6e-12 75.9 152 33.6
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 4.7e-12 75.5 97 39.2
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.1e-12 75.1 85 44.7
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 8.0e-12 74.7 62 50.0
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.0e-12 74.7 62 51.6
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.4e-11 73.9 97 38.1
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.3e-11 73.2 90 40.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 3.0e-11 72.8 62 53.2
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-11 72.8 69 47.8
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-11 72.8 101 40.6
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 5.2e-11 72.0 99 40.4
EL10Ac2g03390 Beta vulgaris HOM05D003888 ORTHO05D007163 8.8e-11 71.2 79 44.3
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.8e-11 71.2 62 50.0
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-10 70.9 80 46.2
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-10 70.5 97 37.1
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-10 70.5 57 54.4
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 2.0e-10 70.1 76 46.1
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 3.3e-10 69.3 95 35.8
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-10 69.3 71 46.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 4.4e-10 68.9 57 50.9
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 4.4e-10 68.9 90 38.9
Peaxi162Scf00373g00032 Petunia axillaris HOM05D003888 ORTHO05D007163 4.4e-10 68.9 82 45.1
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-10 68.9 51 58.8
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-10 68.9 59 54.2
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 5.7e-10 68.6 94 38.3
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 7.4e-10 68.2 78 44.9
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 9.7e-10 67.8 95 34.7
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.7e-10 67.8 58 51.7
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 3.7e-09 65.9 124 33.1
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.7e-09 65.9 62 46.8
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 4.8e-09 65.5 93 46.2
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-09 64.7 58 51.7
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-09 64.7 107 34.6
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-08 64.3 62 48.4
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-08 63.5 111 31.5
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.4e-08 63.2 82 45.1
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.1e-08 62.8 65 50.8
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-08 62.8 109 35.8
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-08 62.8 58 50.0
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 5.3e-08 62.0 144 27.8
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-07 59.7 48 54.2
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 3.5e-07 59.3 72 38.9
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 3.5e-07 59.3 61 49.2
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.5e-07 58.9 60 50.0
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.7e-07 58.2 65 46.2
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-06 57.0 35 68.6
Peaxi162Scf00055g00058 Petunia axillaris HOM05D003888 ORTHO05D007163 2.2e-06 56.6 114 36.0
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.8e-06 55.8 65 46.2
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.5e-06 55.1 65 43.1
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 8.5e-06 54.7 65 40.0
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 8.5e-06 54.7 65 38.5
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 8.5e-06 54.7 35 57.1


User provided reference genes

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