Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400034488 Solanum tuberosum HOM05D008583 ORTHO05D014265 1.8e-125 452.6 224 100.0
PGSC0003DMG400042154 Solanum tuberosum HOM05D008583 ORTHO05D002661 2.8e-30 136.3 102 67.6
PGSC0003DMG400006675 Solanum tuberosum HOM05D008583 ORTHO05D010950 1.6e-25 120.6 75 74.7
PGSC0003DMG400045596 Solanum tuberosum HOM05D008583 ORTHO05D017134 2.7e-25 119.8 75 74.7
PGSC0003DMG400046017 Solanum tuberosum HOM05D008583 ORTHO05D010950 1.8e-24 117.1 135 51.9
PGSC0003DMG400035718 Solanum tuberosum HOM05D008583 ORTHO05D010950 8.7e-24 114.8 75 72.0
PGSC0003DMG400043689 Solanum tuberosum HOM05D000107 ORTHO05D014265 6.3e-22 108.6 64 85.9
PGSC0003DMG400022871 Solanum tuberosum HOM05D008583 ORTHO05D012196 9.0e-21 104.8 109 59.6
PGSC0003DMG400042755 Solanum tuberosum HOM05D008583 ORTHO05D010950 7.6e-20 101.7 55 87.3
Sopen10g011670 Solanum pennellii HOM05D000107 ORTHO05D014265 1.3e-19 100.9 71 74.6
PGSC0003DMG400041639 Solanum tuberosum HOM05D007862 ORTHO05D003926 1.7e-19 100.5 147 45.6
PGSC0003DMG400040905 Solanum tuberosum HOM05D039473 ORTHO05D397515 8.5e-19 98.2 176 42.0
Sopen09g017580 Solanum pennellii HOM05D000107 ORTHO05D014265 1.9e-18 97.1 69 72.5
Sopen11g019250 Solanum pennellii HOM05D000107 ORTHO05D014265 2.5e-18 96.7 71 74.6
PGSC0003DMG400007220 Solanum tuberosum HOM05D008583 ORTHO05D010950 2.5e-18 96.7 111 51.4
PGSC0003DMG400035440 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.2e-18 95.1 111 50.5
PGSC0003DMG400036101 Solanum tuberosum HOM05D005093 ORTHO05D002107 1.6e-17 94.0 105 52.4
PGSC0003DMG400037764 Solanum tuberosum HOM05D008583 ORTHO05D012196 2.7e-17 93.2 101 53.5
PGSC0003DMG400047023 Solanum tuberosum HOM05D008583 ORTHO05D010950 1.8e-16 90.5 75 60.0
Sopen07g006310 Solanum pennellii HOM05D000107 ORTHO05D014265 1.1e-15 87.8 70 62.9
PGSC0003DMG400042404 Solanum tuberosum HOM05D000107 ORTHO05D014265 2.5e-15 86.7 70 60.0
Sopen09g017160 Solanum pennellii HOM05D000107 ORTHO05D014265 3.3e-15 86.3 70 61.4
Sopen07g020900 Solanum pennellii HOM05D000107 ORTHO05D000062 7.4e-15 85.1 76 59.2
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 9.7e-15 84.7 70 60.0
PGSC0003DMG400045017 Solanum tuberosum HOM05D008583 ORTHO05D010950 9.7e-15 84.7 75 54.7
PGSC0003DMG400043089 Solanum tuberosum HOM05D008583 ORTHO05D010950 1.6e-14 84.0 75 54.7
PGSC0003DMG400041026 Solanum tuberosum HOM05D004121 ORTHO05D009816 2.8e-14 83.2 75 54.7
Sopen03g027010 Solanum pennellii HOM05D000107 ORTHO05D014265 3.7e-14 82.8 70 60.0
Sopen04g010740 Solanum pennellii HOM05D000107 ORTHO05D000062 3.7e-14 82.8 70 60.0
Sopen11g015220 Solanum pennellii HOM05D000107 ORTHO05D014265 4.8e-14 82.4 71 57.7
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 6.3e-14 82.0 70 60.0
Sopen08g019930 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-13 81.3 70 60.0
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 1.1e-13 81.3 72 58.3
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 1.8e-13 80.5 70 58.6
PGSC0003DMG400037078 Solanum tuberosum HOM05D008583 ORTHO05D004645 1.8e-13 80.5 140 40.0
PGSC0003DMG400046687 Solanum tuberosum HOM05D008583 ORTHO05D000088 1.8e-13 80.5 103 48.5
PGSC0003DMG400039372 Solanum tuberosum HOM05D008583 ORTHO05D010950 6.9e-13 78.6 75 52.0
Sopen04g021200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-12 77.8 70 57.1
PGSC0003DMG400043540 Solanum tuberosum HOM05D000107 ORTHO05D014265 1.3e-11 74.3 75 49.3
PGSC0003DMG400016768 Solanum tuberosum HOM05D008195 ORTHO05D010950 6.5e-11 72.0 64 54.7
Solyc10g050065.1 Solanum lycopersicum HOM05D000107 ORTHO05D014265 1.1e-10 71.2 66 56.1
PGSC0003DMG400046202 Solanum tuberosum HOM05D008583 ORTHO05D002661 5.5e-10 68.9 97 44.3
PGSC0003DMG400014501 Solanum tuberosum HOM05D002602 ORTHO05D002661 7.2e-10 68.6 73 50.7
PGSC0003DMG400046436 Solanum tuberosum HOM05D008583 ORTHO05D010950 9.4e-10 68.2 80 47.5
PGSC0003DMG400043581 Solanum tuberosum HOM05D008583 ORTHO05D000001 2.1e-09 67.0 34 91.2
PGSC0003DMG400036519 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.7e-09 66.6 92 44.6
PGSC0003DMG400039033 Solanum tuberosum HOM05D008583 ORTHO05D010950 3.6e-09 66.2 71 49.3
PGSC0003DMG400039608 Solanum tuberosum HOM05D008583 ORTHO05D010950 4.6e-09 65.9 34 85.3
PGSC0003DMG400041566 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.6e-09 65.9 44 79.5
Solyc11g042873.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.1e-09 65.5 41 80.5
PGSC0003DMG400041905 Solanum tuberosum HOM05D008583 ORTHO05D010950 7.9e-09 65.1 45 73.3
PGSC0003DMG400005772 Solanum tuberosum HOM05D000158 ORTHO05D010408 1.0e-08 64.7 38 81.6
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 5.1e-08 62.4 59 57.6
PGSC0003DMG400016568 Solanum tuberosum HOM05D008583 ORTHO05D012196 6.7e-08 62.0 76 48.7
PGSC0003DMG400042596 Solanum tuberosum HOM05D008583 ORTHO05D010950 2.0e-07 60.5 67 49.3
PGSC0003DMG400043609 Solanum tuberosum HOM05D008583 ORTHO05D010950 4.4e-07 59.3 136 37.5
PGSC0003DMG400046583 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.4e-07 59.3 54 57.4
Sopen08g007140 Solanum pennellii HOM05D000107 ORTHO05D000570 5.7e-07 58.9 68 50.0
PGSC0003DMG400035956 Solanum tuberosum HOM05D008583 ORTHO05D000034 5.7e-07 58.9 28 89.3
PGSC0003DMG400037939 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.3e-06 57.8 49 63.3
PGSC0003DMG400025621 Solanum tuberosum HOM05D002065 ORTHO05D002050 2.2e-06 57.0 64 50.0
Sopen09g016800 Solanum pennellii HOM05D000107 ORTHO05D000062 4.8e-06 55.8 66 54.5
Sopen09g017230 Solanum pennellii HOM05D000107 ORTHO05D014265 4.8e-06 55.8 45 64.4


User provided reference genes

Program Settings