Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400034431 Solanum tuberosum HOM05D007249 ORTHO05D010076 4.1e-268 927.5 495 100.0
PGSC0003DMG400045484 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.0e-170 602.4 516 63.2
PGSC0003DMG400006505 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.6e-131 473.8 369 68.6
PGSC0003DMG400043539 Solanum tuberosum HOM05D007249 ORTHO05D010076 8.7e-125 451.4 498 53.0
PGSC0003DMG400037244 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.7e-120 437.2 363 65.0
PGSC0003DMG400040017 Solanum tuberosum HOM05D007249 ORTHO05D010076 6.9e-114 415.2 283 73.9
PGSC0003DMG400036617 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.2e-113 414.5 364 61.8
PGSC0003DMG400041189 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.8e-104 382.9 370 57.6
PGSC0003DMG400041605 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.8e-104 382.9 327 62.7
PGSC0003DMG400034526 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.0e-92 344.0 300 60.7
PGSC0003DMG400036725 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.2e-91 340.5 240 72.1
PGSC0003DMG400038745 Solanum tuberosum HOM05D007249 ORTHO05D010076 5.3e-82 309.3 295 57.6
PGSC0003DMG400041737 Solanum tuberosum HOM05D007249 ORTHO05D010076 5.3e-82 309.3 301 57.8
PGSC0003DMG400037521 Solanum tuberosum HOM05D007249 ORTHO05D010076 7.0e-82 308.9 188 80.3
PGSC0003DMG400045459 Solanum tuberosum HOM05D007249 ORTHO05D010076 7.0e-82 308.9 239 67.8
PGSC0003DMG400041835 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.7e-80 304.3 364 49.7
PGSC0003DMG400046497 Solanum tuberosum HOM05D007249 ORTHO05D010076 8.5e-80 302.0 259 61.8
PGSC0003DMG400041821 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.1e-79 301.6 375 48.8
PGSC0003DMG400034643 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.5e-76 291.2 310 53.2
PGSC0003DMG400042405 Solanum tuberosum HOM05D007249 ORTHO05D010076 9.7e-76 288.5 305 53.4
PGSC0003DMG400041775 Solanum tuberosum HOM05D007249 ORTHO05D010076 4.5e-73 279.6 159 84.9
PGSC0003DMG400037694 Solanum tuberosum HOM05D007249 ORTHO05D010076 4.7e-70 269.6 204 67.2
PGSC0003DMG400037252 Solanum tuberosum HOM05D007249 ORTHO05D010076 4.4e-68 263.1 406 45.1
PGSC0003DMG400035306 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.0e-64 251.9 484 36.8
PGSC0003DMG400039448 Solanum tuberosum HOM05D007249 ORTHO05D010076 6.6e-64 249.2 323 46.7
PGSC0003DMG400046871 Solanum tuberosum HOM05D007249 ORTHO05D010076 8.6e-64 248.8 329 46.8
PGSC0003DMG400034901 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.1e-62 244.2 367 44.1
PGSC0003DMG400038039 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.5e-55 220.7 278 48.6
PGSC0003DMG400035315 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.0e-53 213.8 331 42.3
PGSC0003DMG400038141 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.3e-51 208.4 118 81.4
PGSC0003DMG400045006 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.3e-51 208.4 139 76.3
PGSC0003DMG400038103 Solanum tuberosum HOM05D007249 ORTHO05D010076 7.0e-50 202.6 134 73.1
PGSC0003DMG400040059 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.6e-44 184.1 131 68.7
PGSC0003DMG400043244 Solanum tuberosum HOM05D007249 ORTHO05D010076 5.8e-44 183.0 215 52.1
PGSC0003DMG400045824 Solanum tuberosum HOM05D007249 ORTHO05D010076 8.6e-40 169.1 193 52.8
PGSC0003DMG400034599 Solanum tuberosum HOM05D007249 ORTHO05D010076 9.9e-36 155.6 218 44.5
PGSC0003DMG400046286 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.6e-33 148.3 124 60.5
PGSC0003DMG400013996 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.5e-33 147.1 97 71.1
PGSC0003DMG400037220 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.6e-30 138.3 96 68.8
PGSC0003DMG400040229 Solanum tuberosum HOM05D007249 ORTHO05D010076 5.8e-28 129.8 127 54.3
CAN.G1333.14 Capsicum annuum HOM05D022910 ORTHO05D010076 1.9e-26 124.8 120 50.0
PGSC0003DMG400042763 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.0e-24 117.5 96 70.8
PGSC0003DMG400044380 Solanum tuberosum HOM05D007249 ORTHO05D010076 3.9e-24 117.1 198 42.4
CAN.G424.53 Capsicum annuum HOM05D000128 ORTHO05D000059 2.5e-23 114.4 232 35.8
PGSC0003DMG400021696 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.1e-22 111.3 72 70.8
CAN.G65.165 Capsicum annuum HOM05D000004 ORTHO05D000611 1.1e-21 109.0 335 33.1
PGSC0003DMG400038548 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.4e-21 107.8 140 50.7
PGSC0003DMG400038915 Solanum tuberosum HOM05D007249 ORTHO05D010076 2.6e-20 104.4 93 64.5
PGSC0003DMG400043157 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.3e-19 102.1 78 73.1
Sopen11g012300 Solanum pennellii HOM05D007249 ORTHO05D010076 1.4e-18 98.6 69 71.0
CAN.G997.1 Capsicum annuum HOM05D000067 ORTHO05D000280 3.1e-13 80.9 105 49.5
PGSC0003DMG400037719 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.2e-12 79.0 99 42.4
CAN.G1559.3 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-12 77.4 119 42.0
CAN.G407.73 Capsicum annuum HOM05D000541 ORTHO05D000137 4.9e-11 73.6 198 27.8
PGSC0003DMG400046312 Solanum tuberosum HOM05D007249 ORTHO05D010076 6.4e-11 73.2 59 61.0
TPR.G36070 Trifolium pratense HOM05D000004 ORTHO05D000002 1.9e-10 71.6 121 36.4
PSO675G6918 Papaver somniferum HOM05D000004 ORTHO05D000002 9.3e-10 69.3 145 31.0
PGSC0003DMG400038346 Solanum tuberosum HOM05D007249 ORTHO05D023158 1.2e-09 68.9 103 43.7
PGSC0003DMG400039075 Solanum tuberosum HOM05D007249 ORTHO05D023158 1.2e-09 68.9 103 43.7
THA.LOC104816126 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-09 68.9 147 28.6
TPR.G40777 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-09 68.9 121 35.5
THA.LOC109116729 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.1e-09 68.2 147 30.6
CAN.G308.19 Capsicum annuum HOM05D000011 ORTHO05D000018 2.7e-09 67.8 109 40.4
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-09 67.4 133 33.1
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-09 67.4 133 33.1
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-09 67.4 133 33.1
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-09 67.4 133 33.1
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-09 67.4 133 33.1
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 3.5e-09 67.4 133 33.1
THA.LOC104815187 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.5e-09 67.4 139 30.2
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 4.6e-09 67.0 131 31.3
THA.LOC104809125 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.0e-09 66.6 141 30.5
THA.LOC109115991 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.0e-09 66.6 141 30.5
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 7.9e-09 66.2 133 34.6
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 1.0e-08 65.9 133 32.3
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 1.0e-08 65.9 133 32.3
TPR.G17086 Trifolium pratense HOM05D000004 ORTHO05D000002 1.0e-08 65.9 121 34.7
THA.LOC109117167 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.3e-08 65.5 139 29.5
CAN.G206.78 Capsicum annuum HOM05D000629 ORTHO05D000576 1.8e-08 65.1 76 44.7
Atru.chr1.2102 Acer truncatum HOM05D000004 ORTHO05D000002 2.3e-08 64.7 120 32.5
ECA232G1740 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-08 64.7 136 29.4
ECA246G2930 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-08 64.3 126 33.3
PGR042G1210 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-08 64.3 148 29.7
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-08 64.3 133 32.3
THA.LOC109117175 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.0e-08 64.3 141 29.8
THA.LOC104821897 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.9e-08 63.9 157 28.7
Thecc.05G097400 Theobroma cacao HOM05D000004 ORTHO05D000002 3.9e-08 63.9 147 32.7
THA.LOC109116954 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.1e-08 63.5 129 30.2
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.7e-08 63.2 226 27.4
Atru.chr4.546 Acer truncatum HOM05D000004 ORTHO05D000002 8.7e-08 62.8 130 32.3
SEGI_30120 Sequoiadendron giganteum HOM05D000141 ORTHO05D004038 1.1e-07 62.4 144 31.9
PGSC0003DMG400045612 Solanum tuberosum HOM05D007249 ORTHO05D010076 1.1e-07 62.4 31 93.5
THA.LOC104815166 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-07 62.4 139 28.1
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-07 62.0 124 30.6
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-07 62.0 127 30.7
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-07 62.0 135 32.6
THA.LOC104825361 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.5e-07 62.0 129 30.2
CAN.G17.2 Capsicum annuum HOM05D001594 ORTHO05D002862 1.9e-07 61.6 89 48.3
Ca_27390_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-07 61.6 109 33.9
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-07 61.6 133 32.3
THA.LOC104800054 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.9e-07 61.6 227 26.4
PGR044G0528 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-07 61.2 124 31.5
THA.LOC104818561 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.5e-07 61.2 129 30.2
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 3.3e-07 60.8 124 31.5
THA.LOC104804981 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.3e-07 60.8 156 28.8
THA.LOC109116762 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.3e-07 60.8 147 28.6
TPR.G39423 Trifolium pratense HOM05D000004 ORTHO05D000002 3.3e-07 60.8 121 30.6
Cpa.g.sc22.44 Carica papaya HOM05D000004 ORTHO05D000002 4.3e-07 60.5 137 28.5
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 5.6e-07 60.1 135 30.4
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-07 59.3 109 33.9
Sopen11g012240 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-07 59.3 96 29.2
THA.LOC104804721 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.6e-07 59.3 140 27.9
THA.LOC104807077 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.6e-07 59.3 227 26.4
Atru.chr4.606 Acer truncatum HOM05D000004 ORTHO05D000002 1.3e-06 58.9 120 29.2
THA.LOC104815177 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.3e-06 58.9 97 36.1
SEGI_34931 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-06 58.5 113 33.6
SEGI_41256 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-06 58.5 128 30.5
THA.LOC104821189 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.6e-06 58.5 121 33.1
Hma1.2p1_0021F.1_g014260 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.1e-06 58.2 113 33.6
PGR083G0982 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-06 58.2 121 31.4
THA.LOC109116070 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.1e-06 58.2 101 30.7
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 2.1e-06 58.2 121 29.8
Cpa.g.sc210.4 Carica papaya HOM05D000004 ORTHO05D000002 2.8e-06 57.8 120 30.0
Cpa.g.sc225.3 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-06 57.8 123 30.9
THA.LOC104806049 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.8e-06 57.8 109 31.2
PGR142G4213 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-06 57.4 125 30.4
ECA232G4187 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-06 57.0 243 26.7
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 4.8e-06 57.0 169 27.2
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 4.8e-06 57.0 111 29.7
Ah.08g223370 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.2e-06 56.6 119 28.6
CAN.G453.3 Capsicum annuum HOM05D000004 ORTHO05D000002 6.2e-06 56.6 182 28.6
Cpa.g.sc782.1 Carica papaya HOM05D000004 ORTHO05D000563 6.2e-06 56.6 120 28.3
ECA246G2972 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-06 56.6 98 35.7
PSO339G1289 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-06 56.6 97 35.1
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 6.2e-06 56.6 94 37.2
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 6.2e-06 56.6 126 31.0
RcHm_v2.0_Chr5g0015171 Rosa chinensis HOM05D000004 ORTHO05D000002 6.2e-06 56.6 109 27.5
SEGI_31812 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.2e-06 56.6 98 33.7
THA.LOC104798707 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.2e-06 56.6 129 27.1
THA.LOC109117145 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 6.2e-06 56.6 102 31.4
TPR.G31041 Trifolium pratense HOM05D000004 ORTHO05D000002 6.2e-06 56.6 120 32.5
CSS0030845 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.1e-06 56.2 113 29.2
Cpa.g.sc440.3 Carica papaya HOM05D000004 ORTHO05D000002 8.1e-06 56.2 123 30.9
ECA246G1513 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.1e-06 56.2 100 34.0
Hma1.2p1_0193F.1_g083940 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.1e-06 56.2 94 34.0
PSO761G0440 Papaver somniferum HOM05D000004 ORTHO05D000002 8.1e-06 56.2 97 35.1
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 8.1e-06 56.2 93 36.6
PGSC0003DMG400037322 Solanum tuberosum HOM05D007249 ORTHO05D010076 8.1e-06 56.2 41 68.3
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 8.1e-06 56.2 108 33.3


User provided reference genes

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