Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025949 Solanum tuberosum HOM05D000641 ORTHO05D008820 1.4e-27 125.6 65 100.0
PGSC0003DMG400034071 Solanum tuberosum HOM05D000641 ORTHO05D008820 1.4e-27 125.6 65 100.0
CAN.G248.59 Capsicum annuum HOM05D000641 ORTHO05D008820 4.1e-14 80.9 43 88.4
PGSC0003DMG400018319 Solanum tuberosum HOM05D000641 ORTHO05D008820 6.9e-14 80.1 56 69.6
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 2.6e-13 78.2 43 83.7
Solyc07g054390.1 Solanum lycopersicum HOM05D000641 ORTHO05D008820 1.0e-12 76.3 56 64.3
Nitab4.5_0003018g0010 Nicotiana tabacum HOM05D000641 ORTHO05D008820 8.4e-12 73.2 51 70.6
Nitab4.5_0001090g0030 Nicotiana tabacum HOM05D000641 ORTHO05D008820 5.5e-11 70.5 56 64.3
Cc05_g06430 Coffea canephora HOM05D000641 ORTHO05D008820 1.6e-10 68.9 43 72.1
PSO541G2384 Papaver somniferum HOM05D000641 ORTHO05D008820 1.6e-10 68.9 43 67.4
PSO675G1637 Papaver somniferum HOM05D000641 ORTHO05D008820 1.6e-10 68.9 43 67.4
Peaxi162Scf00132g00729 Petunia axillaris HOM05D000641 ORTHO05D008820 1.6e-10 68.9 43 72.1
Sabra13G0117900 Salix brachista HOM05D000641 ORTHO05D008820 2.1e-10 68.6 43 72.1
Psat5g270000 Pisum sativum HOM05D000641 ORTHO05D008820 1.0e-09 66.2 42 69.0
Actinidia39298 Actinidia chinensis HOM05D000641 ORTHO05D008820 2.3e-09 65.1 43 67.4
Medtr2g090050 Medicago truncatula HOM05D000641 ORTHO05D008820 2.3e-09 65.1 42 66.7
MBI05_g42458_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D008820 3.9e-09 64.3 41 73.2
GSVIVG01030582001 Vitis vinifera HOM05D000641 ORTHO05D008820 3.9e-09 64.3 53 64.2
Ca_01534_v3 Cicer arietinum L. HOM05D000641 ORTHO05D008820 6.7e-09 63.5 42 64.3
Dinv23702 Davidia involucrata HOM05D000641 ORTHO05D008820 6.7e-09 63.5 43 67.4
MBI05_g33211_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D008820 6.7e-09 63.5 39 74.4
Atru.chr6.3062 Acer truncatum HOM05D000641 ORTHO05D008820 1.9e-08 62.0 45 62.2
Potri.013G146100 Populus trichocarpa HOM05D000641 ORTHO05D008820 1.9e-08 62.0 38 73.7
TWI36G0041 Tripterygium wilfordii HOM05D000641 ORTHO05D008820 1.9e-08 62.0 43 60.5
TPR.G27112 Trifolium pratense HOM05D000641 ORTHO05D008820 2.5e-08 61.6 41 63.4
CANSAT64G1209 Cannabis sativa HOM05D000641 ORTHO05D008820 3.3e-08 61.2 41 65.9
QL08p037487 Quercus lobata HOM05D000641 ORTHO05D008820 4.3e-08 60.8 41 70.7
MBI02_g35905_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D008820 9.7e-08 59.7 39 69.2
Sed0017549 Sechium edule HOM05D000641 ORTHO05D008820 9.7e-08 59.7 41 61.0
arahy.Tifrunner.gnm1.ann1.92XMB3 Arachis hypogaea HOM05D000641 ORTHO05D008820 1.3e-07 59.3 41 58.5
Cfa014550 Carpinus fangiana HOM05D000641 ORTHO05D008820 1.3e-07 59.3 41 63.4
Dinv15478 Davidia involucrata HOM05D000492 ORTHO05D008820 1.3e-07 59.3 45 64.4
CsaV3_6G012470 Cucumis sativus L. HOM05D000641 ORTHO05D008820 1.6e-07 58.9 60 48.3
Glyma.13G300600 Glycine max HOM05D000641 ORTHO05D008820 1.6e-07 58.9 42 59.5
HanXRQChr10g0297061 Helianthus annuus HOM05D000641 ORTHO05D008820 1.6e-07 58.9 45 57.8
Lj3g0000685 Lotus japonicus HOM05D000641 ORTHO05D008820 1.6e-07 58.9 42 61.9
Glyma.06G298000 Glycine max HOM05D000641 ORTHO05D008820 2.2e-07 58.5 41 61.0
Aqoxy1G02752 Aquilegia oxysepala HOM05D000641 ORTHO05D008820 2.8e-07 58.2 43 62.8
SalBow1G7770 Salvia bowleyana HOM05D000641 ORTHO05D008820 2.8e-07 58.2 43 58.1
ClCG02G017370 Citrullus lanatus HOM05D000641 ORTHO05D008820 6.3e-07 57.0 41 58.5
Oeu005830.1 Olea europaea HOM05D000641 ORTHO05D008820 6.3e-07 57.0 45 53.3
Sed0008278 Sechium edule HOM05D000641 ORTHO05D008820 6.3e-07 57.0 47 55.3
TAR624G1068 Trochodendron aralioides HOM05D000641 ORTHO05D008820 6.3e-07 57.0 46 58.7
Haze_13095 Corylus avellana HOM05D000641 ORTHO05D008820 8.2e-07 56.6 41 63.4
MELO3C013532.2 Cucumis melo HOM05D000641 ORTHO05D008820 8.2e-07 56.6 41 58.5
FAN05G1593 Fragaria x ananassa HOM05D000641 ORTHO05D008820 8.2e-07 56.6 41 63.4
Manes.05G121400 Manihot esculenta HOM05D000641 ORTHO05D008820 8.2e-07 56.6 41 61.0
arahy.Tifrunner.gnm1.ann1.4122HZ Arachis hypogaea HOM05D000641 ORTHO05D008820 1.1e-06 56.2 41 58.5
Duzib248G0813 Durio zibethinus HOM05D000641 ORTHO05D008820 1.1e-06 56.2 39 61.5
Lsat_1_v5_gn_4_70320 Lactuca sativa HOM05D000641 ORTHO05D008820 1.1e-06 56.2 43 55.8
Ciclev10017570m.g Citrus clementina HOM05D000641 ORTHO05D008820 1.4e-06 55.8 45 55.6
Migut.H01022 Erythranthe guttata HOM05D000641 ORTHO05D008820 1.4e-06 55.8 41 61.0
FAN02G0524 Fragaria x ananassa HOM05D000641 ORTHO05D008820 1.4e-06 55.8 39 64.1
SGA_v2.0_scaffold159G37628 Striga asiatica HOM05D000641 ORTHO05D008820 1.4e-06 55.8 43 55.8
arahy.Tifrunner.gnm1.ann1.ATG8WK Arachis hypogaea HOM05D000641 ORTHO05D008820 1.8e-06 55.5 41 56.1
arahy.Tifrunner.gnm1.ann1.RA1C4M Arachis hypogaea HOM05D000641 ORTHO05D008820 1.8e-06 55.5 41 56.1
Glyma.12G107200 Glycine max HOM05D000641 ORTHO05D008820 1.8e-06 55.5 41 61.0
Gohir.A12G136800 Gossypium hirsutum HOM05D000641 ORTHO05D008820 1.8e-06 55.5 41 58.5
Oeu032188.1 Olea europaea HOM05D000641 ORTHO05D008820 1.8e-06 55.5 43 58.1
Cpa.g.sc34.106 Carica papaya HOM05D000641 ORTHO05D008820 3.1e-06 54.7 41 63.4
CiPaw.04G123000 Carya illinoinensis HOM05D000641 ORTHO05D008820 3.1e-06 54.7 41 58.5
ECA234G0295 Erigeron canadensis HOM05D000492 ORTHO05D000499 3.1e-06 54.7 39 61.5
Eucgr.A01785 Eucalyptus grandis HOM05D000641 ORTHO05D008820 3.1e-06 54.7 43 55.8
Nn1g03917 Nelumbo nucifera HOM05D000641 ORTHO05D008820 3.1e-06 54.7 41 61.0
Prupe.3G232200 Prunus persica HOM05D000641 ORTHO05D008820 3.1e-06 54.7 41 63.4
VMungo1080G0966 Vigna mungo HOM05D001969 ORTHO05D003463 3.1e-06 54.7 42 54.8
DCAR_012985 Daucus carota HOM05D000641 ORTHO05D008820 4.1e-06 54.3 43 51.2
FAN14G1122 Fragaria x ananassa HOM05D000641 ORTHO05D008820 4.1e-06 54.3 41 61.0
MD17G1083000 Malus domestica HOM05D000641 ORTHO05D008820 9.0e-06 53.1 39 56.4
Phvul.005G107400 Phaseolus vulgaris HOM05D000641 ORTHO05D008820 9.0e-06 53.1 42 54.8


User provided reference genes

Program Settings