Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 5.3e-80 301.2 180 100.0
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.9e-74 282.7 181 89.0
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 5.1e-59 231.5 182 79.7
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.9e-53 213.0 174 78.2
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 7.5e-34 147.9 182 53.3
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 7.5e-34 147.9 182 53.3
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 7.5e-34 147.9 182 53.3
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 9.1e-32 141.0 185 50.3
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 2.7e-31 139.4 74 95.9
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.7e-31 139.4 86 84.9
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.7e-31 139.4 86 84.9
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 4.5e-31 138.7 185 50.8
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.3e-30 137.1 97 79.4
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 2.3e-30 136.3 86 83.7
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 8.6e-30 134.4 178 47.8
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 3.2e-29 132.5 190 47.9
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 4.2e-29 132.1 85 77.6
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 4.2e-29 132.1 85 81.2
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 4.2e-29 132.1 100 71.0
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 7.2e-29 131.3 187 49.2
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 7.2e-29 131.3 163 54.6
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 9.5e-29 131.0 187 47.1
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 9.5e-29 131.0 98 71.4
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 9.5e-29 131.0 90 74.4
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 1.2e-28 130.6 87 77.0
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.2e-28 130.6 86 79.1
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 1.6e-28 130.2 94 73.4
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 2.8e-28 129.4 183 48.6
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 3.6e-28 129.0 173 50.3
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 4.7e-28 128.6 90 74.4
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 8.0e-28 127.9 97 70.1
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.8e-27 126.7 177 50.3
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.8e-27 126.7 185 50.3
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.8e-27 126.7 85 78.8
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 3.0e-27 125.9 86 73.3
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.0e-27 125.9 180 50.0
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 3.0e-27 125.9 87 79.3
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 4.0e-27 125.6 89 73.0
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 4.0e-27 125.6 86 75.6
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 5.2e-27 125.2 86 75.6
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 8.8e-27 124.4 87 75.9
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.2e-26 124.0 94 69.1
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.5e-26 123.6 98 67.3
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.5e-26 123.6 87 78.2
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.5e-26 123.6 171 49.1
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 2.0e-26 123.2 84 75.0
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 5.7e-26 121.7 101 66.3
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.7e-25 120.2 96 66.7
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 1.7e-25 120.2 81 76.5
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 2.8e-25 119.4 88 73.9
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 3.7e-25 119.0 92 69.6
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 3.7e-25 119.0 101 65.3
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 3.7e-25 119.0 101 65.3
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 3.7e-25 119.0 101 65.3
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 3.7e-25 119.0 92 70.7
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 4.9e-25 118.6 101 65.3
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 4.9e-25 118.6 170 50.0
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 4.9e-25 118.6 86 72.1
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 4.9e-25 118.6 90 67.8
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 6.3e-25 118.2 69 84.1
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 6.3e-25 118.2 102 65.7
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 8.3e-25 117.9 82 75.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 8.3e-25 117.9 86 73.3
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.1e-24 117.5 92 69.6
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.1e-24 117.5 86 68.6
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.1e-24 117.5 86 68.6
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.1e-24 117.5 86 68.6
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.1e-24 117.5 102 64.7
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 1.4e-24 117.1 82 76.8
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.8e-24 116.7 165 49.1
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.8e-24 116.7 165 49.1
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.8e-24 116.7 178 45.5
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 1.8e-24 116.7 102 60.8
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 2.4e-24 116.3 165 45.5
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 2.4e-24 116.3 83 72.3
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 3.1e-24 115.9 84 72.6
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 3.1e-24 115.9 171 48.0
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 4.1e-24 115.5 97 64.9
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 4.1e-24 115.5 94 68.1
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 5.4e-24 115.2 153 53.6
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 7.0e-24 114.8 173 47.4
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 9.2e-24 114.4 95 66.3
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.2e-23 114.0 96 66.7
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.6e-23 113.6 174 44.3
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 2.0e-23 113.2 176 48.3
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 2.7e-23 112.8 90 66.7
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 2.7e-23 112.8 93 64.5
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 5.9e-23 111.7 71 80.3
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 1.0e-22 110.9 85 69.4
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.3e-22 110.5 73 72.6
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.8e-22 109.0 67 80.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.5e-21 107.1 64 81.2
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 5.6e-21 105.1 76 72.4
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 9.5e-21 104.4 92 58.7
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 4.0e-19 99.0 84 63.1
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 6.8e-19 98.2 69 76.8
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 7.5e-18 94.7 95 54.7
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 8.3e-17 91.3 60 73.3
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 3.5e-15 85.9 65 66.2
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 5.9e-15 85.1 77 55.8
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 4.3e-13 79.0 87 49.4
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.3e-11 73.2 70 55.7
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.3e-11 73.2 72 56.9
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 1.2e-10 70.9 80 50.0
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 2.6e-10 69.7 54 57.4
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 3.2e-08 62.8 70 50.0


User provided reference genes

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