Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 1.8e-41 172.2 87 100.0
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 4.9e-39 164.1 87 95.4
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 1.1e-38 162.9 87 94.3
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 1.4e-33 146.0 85 88.2
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.9e-31 138.3 83 81.9
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 2.8e-26 121.7 86 69.8
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.6e-26 121.3 66 86.4
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 4.7e-26 120.9 85 70.6
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.8e-25 119.0 84 69.0
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 8.9e-25 116.7 88 67.0
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.0e-24 115.5 86 68.6
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 2.6e-24 115.2 79 68.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 3.4e-24 114.8 69 76.8
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 7.5e-24 113.6 88 63.6
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 7.5e-24 113.6 91 64.8
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 1.3e-23 112.8 84 65.5
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.7e-23 112.5 89 61.8
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 1.7e-23 112.5 85 68.2
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 2.2e-23 112.1 84 63.1
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 2.2e-23 112.1 84 63.1
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 2.2e-23 112.1 84 63.1
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.2e-23 112.1 89 62.9
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 2.9e-23 111.7 82 64.6
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.9e-23 111.7 80 66.2
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 3.7e-23 111.3 85 67.1
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 3.7e-23 111.3 89 62.9
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 4.9e-23 110.9 84 60.7
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 4.9e-23 110.9 85 63.5
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 4.9e-23 110.9 87 64.4
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 6.4e-23 110.5 91 62.6
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.4e-23 110.5 86 67.4
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 6.4e-23 110.5 86 67.4
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 1.1e-22 109.8 85 63.5
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.4e-22 109.4 84 61.9
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 1.4e-22 109.4 89 62.9
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 1.9e-22 109.0 82 64.6
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.9e-22 109.0 85 63.5
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.9e-22 109.0 84 63.1
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.4e-22 108.6 80 68.8
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 3.2e-22 108.2 86 61.6
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 5.4e-22 107.5 84 60.7
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.4e-22 107.5 85 62.4
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 9.2e-22 106.7 87 59.8
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 9.2e-22 106.7 81 63.0
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.6e-21 105.9 84 60.7
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.6e-21 105.9 84 60.7
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.6e-21 105.9 84 60.7
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 2.1e-21 105.5 87 59.8
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 2.1e-21 105.5 86 60.5
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-21 105.5 86 60.5
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-21 105.5 86 60.5
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 3.5e-21 104.8 84 61.9
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.5e-21 104.8 85 62.4
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.5e-21 104.8 86 64.0
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 6.0e-21 104.0 84 60.7
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 1.0e-20 103.2 72 65.3
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.0e-20 103.2 83 60.2
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.0e-20 103.2 79 62.0
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.3e-20 102.8 66 69.7
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 2.3e-20 102.1 85 62.4
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 3.0e-20 101.7 79 63.3
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.0e-20 101.7 83 60.2
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.0e-20 101.7 67 71.6
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 6.6e-20 100.5 87 57.5
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 8.6e-20 100.1 83 59.0
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 8.6e-20 100.1 88 56.8
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.5e-19 98.6 83 59.0
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 4.3e-19 97.8 85 56.5
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.6e-18 95.9 67 70.1
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 2.1e-18 95.5 100 53.0
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 2.1e-18 95.5 66 68.2
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 4.7e-18 94.4 85 54.1
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.1e-17 93.2 86 54.7
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.4e-17 92.8 83 56.6
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 2.4e-17 92.0 66 60.6
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 5.2e-17 90.9 72 59.7
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 8.9e-17 90.1 69 59.4
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 8.9e-17 90.1 65 64.6
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 3.4e-16 88.2 69 55.1
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 9.9e-16 86.7 59 67.8
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 6.4e-15 84.0 50 74.0
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 6.4e-15 84.0 50 80.0
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.9e-14 82.4 63 58.7
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 7.1e-14 80.5 69 55.1
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.0e-12 76.6 70 47.1
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 2.3e-12 75.5 75 50.7
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.3e-10 69.7 44 70.5
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.8e-09 65.9 44 65.9
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 2.0e-08 62.4 41 68.3
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 3.4e-08 61.6 43 67.4
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.1e-06 56.6 84 39.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 9.3e-06 53.5 36 66.7


User provided reference genes

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