Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 1.4e-251 872.5 431 100.0
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 9.0e-235 816.6 432 94.7
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 2.2e-209 732.3 440 83.9
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 1.8e-206 722.6 434 83.4
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 1.2e-191 673.3 452 79.9
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 2.4e-179 632.5 404 79.7
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 2.0e-154 549.7 435 66.9
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 1.2e-141 507.3 437 62.0
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 2.0e-141 506.5 437 61.8
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 8.3e-140 501.1 433 61.9
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 2.7e-138 496.1 434 62.0
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 8.6e-137 491.1 442 61.8
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 4.0e-126 455.7 432 57.4
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 3.8e-108 396.0 429 52.7
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 1.2e-106 391.0 448 50.4
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 2.1e-106 390.2 428 53.7
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 1.3e-103 380.9 439 49.9
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 1.1e-99 367.9 432 50.7
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 5.5e-99 365.5 433 49.9
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 3.5e-98 362.8 446 50.2
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 3.5e-98 362.8 430 49.3
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 4.0e-94 349.4 168 98.2
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 2.7e-90 336.7 436 46.1
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 4.6e-90 335.9 427 47.3
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.8e-89 334.0 232 68.5
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 8.5e-84 315.1 440 43.4
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 1.1e-83 314.7 232 62.1
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 3.2e-83 313.2 248 60.1
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 2.2e-79 300.4 429 42.2
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 2.4e-78 297.0 225 64.0
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 2.4e-78 297.0 225 64.0
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 2.0e-77 293.9 248 56.5
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 1.4e-75 287.7 201 68.2
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 6.1e-74 282.3 239 59.0
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 3.5e-45 186.8 139 61.9
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 4.1e-22 110.2 105 51.4
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.3e-15 88.6 188 28.7
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 7.8e-13 79.3 192 28.6
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 4.3e-11 73.6 191 29.8
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 9.6e-11 72.4 182 27.5
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 3.4e-08 63.9 192 26.6
CDE12G0818 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 3.8e-07 60.5 157 28.7
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 3.8e-07 60.5 106 34.0
PSO063G4532 Papaver somniferum HOM05D000886 ORTHO05D000525 2.4e-06 57.8 147 27.2
Manes.11G141300 Manihot esculenta HOM05D000886 ORTHO05D000525 3.2e-06 57.4 152 27.6
Os01g0737600 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 3.2e-06 57.4 111 32.4
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 3.2e-06 57.4 150 28.0
CDE12G0614 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 4.2e-06 57.0 113 30.1
COL.COLO4_12936 Corchorus olitorius HOM05D008582 ORTHO05D010200 4.2e-06 57.0 112 34.8
Psat0s4525g0040 Pisum sativum HOM05D000886 ORTHO05D000525 9.3e-06 55.8 144 30.6


User provided reference genes

Program Settings