Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 4.9e-41 170.6 82 100.0
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.0e-38 162.9 82 96.3
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.0e-38 162.9 82 96.3
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 3.2e-32 141.4 82 84.1
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 8.7e-30 133.3 82 78.0
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 1.5e-21 105.9 80 65.0
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 3.7e-20 101.3 80 58.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 3.7e-20 101.3 80 60.0
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 4.8e-20 100.9 80 58.8
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 5.3e-19 97.4 81 60.5
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 9.0e-19 96.7 80 57.5
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.3e-17 92.8 81 55.6
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.7e-17 92.4 82 51.2
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 2.9e-17 91.7 83 55.4
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.9e-17 91.7 81 56.8
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 4.9e-17 90.9 81 56.8
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 1.4e-16 89.4 81 55.6
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.2e-16 88.2 80 53.8
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 3.2e-16 88.2 80 55.0
Peaxi162Scf00798g00320 Petunia axillaris HOM05D008200 ORTHO05D007342 3.2e-16 88.2 83 53.0
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 2.7e-15 85.1 79 51.9
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.8e-14 82.4 66 54.5
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 3.0e-14 81.6 72 58.3
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 3.9e-14 81.3 56 62.5
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.1e-14 80.9 56 60.7
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 5.1e-14 80.9 56 60.7
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 1.1e-13 79.7 75 46.7
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.9e-13 79.0 56 60.7
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.5e-13 78.6 80 47.5
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.5e-13 78.6 56 57.1
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 3.3e-13 78.2 56 60.7
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 1.3e-12 76.3 57 52.6
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.6e-12 75.9 56 60.7
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.1e-12 75.5 56 58.9
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.1e-12 75.5 68 48.5
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.8e-12 75.1 65 49.2
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 1.1e-11 73.2 89 43.8
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.4e-11 72.8 82 47.6
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.8e-11 72.4 65 46.2
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.9e-11 70.5 56 51.8
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.9e-11 70.5 56 51.8
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.9e-11 70.5 81 43.2
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.9e-11 70.5 80 45.0
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 6.9e-11 70.5 56 51.8
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 1.2e-10 69.7 58 50.0
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 1.5e-10 69.3 71 49.3
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.5e-10 69.3 79 45.6
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.4e-10 68.2 81 43.2
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.5e-10 67.8 80 45.0
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 5.8e-10 67.4 56 51.8
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 5.8e-10 67.4 65 41.5
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 7.6e-10 67.0 78 38.5
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.0e-09 66.6 56 50.0
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 1.3e-09 66.2 79 44.3
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-09 65.9 67 44.8
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.8e-09 64.7 56 46.4
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 5.0e-09 64.3 80 42.5
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 6.5e-09 63.9 65 38.5
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 8.4e-09 63.5 65 41.5
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 8.4e-09 63.5 79 41.8
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 8.4e-09 63.5 75 40.0
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-08 62.8 82 43.9
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 1.9e-08 62.4 78 38.5
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 2.5e-08 62.0 57 43.9
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 3.2e-08 61.6 76 42.1
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 5.5e-08 60.8 74 36.5
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 5.5e-08 60.8 62 41.9
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 7.1e-08 60.5 75 44.0
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 7.1e-08 60.5 82 42.7
Psat7g225880 Pisum sativum HOM05D007628 ORTHO05D007342 1.2e-07 59.7 78 37.2
Prupe.1G552700 Prunus persica HOM05D007628 ORTHO05D007342 2.7e-07 58.5 74 40.5
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.5e-07 58.2 68 41.2
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 4.6e-07 57.8 67 41.8
Nitab4.5_0007796g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.3e-06 55.5 25 96.0
Hund02181 Selenicereus undatus HOM05D007628 ORTHO05D007342 3.9e-06 54.7 72 47.2
Actinidia25283 Actinidia chinensis HOM05D007628 ORTHO05D007342 5.1e-06 54.3 75 44.0
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.7e-06 53.5 64 34.4


User provided reference genes

Program Settings