Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400030813 Solanum tuberosum HOM05D002457 ORTHO05D005750 1.8e-30 135.2 64 100.0
Solyc04g074490.3 Solanum lycopersicum HOM05D002457 ORTHO05D005750 1.5e-24 115.5 58 93.1
Sopen04g029500 Solanum pennellii HOM05D002457 ORTHO05D005750 5.6e-24 113.6 62 85.5
CAN.G970.12 Capsicum annuum HOM05D002457 ORTHO05D005750 3.4e-21 104.4 58 84.5
Nitab4.5_0000786g0170 Nicotiana tabacum HOM05D002457 ORTHO05D005750 2.2e-20 101.7 62 75.8
Nitab4.5_0006196g0020 Nicotiana tabacum HOM05D002457 ORTHO05D005750 1.4e-19 99.0 62 74.2
Peaxi162Scf00030g01716 Petunia axillaris HOM05D002457 ORTHO05D005750 1.0e-17 92.8 62 74.2
Dinv19118 Davidia involucrata HOM05D002457 ORTHO05D005750 5.4e-11 70.5 58 56.9
Dinv44797 Davidia involucrata HOM05D002457 ORTHO05D005750 5.4e-11 70.5 57 57.9
Rhsim06G0078900 Rhododendron simsii HOM05D002457 ORTHO05D005750 1.6e-10 68.9 57 54.4
MD08G1186800 Malus domestica HOM05D002457 ORTHO05D005750 2.0e-10 68.6 58 53.4
Cc10_g06810 Coffea canephora HOM05D002457 ORTHO05D005750 1.3e-09 65.9 57 54.4
MD15G1372700 Malus domestica HOM05D002457 ORTHO05D005750 1.3e-09 65.9 58 53.4
Prupe.1G521300 Prunus persica HOM05D002457 ORTHO05D005750 3.9e-09 64.3 58 48.3
vmacro21245 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 3.9e-09 64.3 58 51.7
vmacro21299 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 3.9e-09 64.3 58 51.7
Sabra02G0078000 Salix brachista HOM05D002457 ORTHO05D005750 1.1e-08 62.8 58 50.0
Gohir.A01G132300 Gossypium hirsutum HOM05D002457 ORTHO05D005750 1.9e-08 62.0 60 46.7
Gorai.002G140900 Gossypium raimondii HOM05D002457 ORTHO05D005750 2.5e-08 61.6 60 46.7
Ciclev10000161m.g Citrus clementina HOM05D002457 ORTHO05D005750 3.3e-08 61.2 58 46.6
Hund26976 Selenicereus undatus HOM05D002457 ORTHO05D005750 4.3e-08 60.8 58 51.7
CSS0003030 Camellia sinensis var. sinensis HOM05D002457 ORTHO05D005750 5.6e-08 60.5 58 48.3
Gohir.D01G115200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 5.6e-08 60.5 60 45.0
Lj1g0014547 Lotus japonicus HOM05D002457 ORTHO05D005750 7.3e-08 60.1 58 46.6
TAR381G1374 Trochodendron aralioides HOM05D002457 ORTHO05D005750 9.5e-08 59.7 58 53.4
COL.COLO4_12026 Corchorus olitorius HOM05D002457 ORTHO05D005750 2.1e-07 58.5 58 51.7
Potri.002G099400 Populus trichocarpa HOM05D002457 ORTHO05D005750 2.1e-07 58.5 58 51.7
FvH4_5g36800 Fragaria vesca HOM05D002457 ORTHO05D005750 4.7e-07 57.4 58 48.3
Aqoxy6G00731 Aquilegia oxysepala HOM05D002457 ORTHO05D005750 1.1e-06 56.2 58 51.7
AUR62027799 Chenopodium quinoa HOM05D002457 ORTHO05D005750 1.8e-06 55.5 58 46.6
TPR.G14216 Trifolium pratense HOM05D002457 ORTHO05D005750 2.3e-06 55.1 58 50.0
PGR042G2032 Punica granatum HOM05D002457 ORTHO05D005750 3.1e-06 54.7 61 52.5
RcHm_v2.0_Chr7g0243001 Rosa chinensis HOM05D002457 ORTHO05D005750 3.1e-06 54.7 58 46.6
GSVIVG01009071001 Vitis vinifera HOM05D002457 ORTHO05D005750 3.1e-06 54.7 58 50.0
Eucgr.F00367 Eucalyptus grandis HOM05D002457 ORTHO05D005750 4.0e-06 54.3 60 48.3
FAN04G0153 Fragaria x ananassa HOM05D002457 ORTHO05D005750 4.0e-06 54.3 56 48.2
FAN08G0375 Fragaria x ananassa HOM05D002457 ORTHO05D005750 4.0e-06 54.3 56 48.2
FAN13G1549 Fragaria x ananassa HOM05D002457 ORTHO05D005750 4.0e-06 54.3 56 48.2
FAN18G1557 Fragaria x ananassa HOM05D002457 ORTHO05D005750 4.0e-06 54.3 56 48.2
Ca_16043_v3 Cicer arietinum L. HOM05D002457 ORTHO05D005750 5.2e-06 53.9 61 44.3
Glyma.06G101600 Glycine max HOM05D002457 ORTHO05D005750 5.2e-06 53.9 60 41.7
Manes.18G065400 Manihot esculenta HOM05D002457 ORTHO05D005750 5.2e-06 53.9 61 49.2
Actinidia10339 Actinidia chinensis HOM05D002457 ORTHO05D005750 6.8e-06 53.5 59 45.8
RcHm_v2.0_Chr7g0243141 Rosa chinensis HOM05D002457 ORTHO05D005750 8.9e-06 53.1 58 46.6
RcHm_v2.0_Chr7g0243351 Rosa chinensis HOM05D002457 ORTHO05D005750 8.9e-06 53.1 58 46.6


User provided reference genes

Program Settings