Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 6.7e-301 1036.6 523 100.0
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.4e-274 948.3 524 93.3
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 5.5e-263 910.6 525 90.3
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 7.5e-260 900.2 529 89.2
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.4e-234 815.5 550 81.1
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.1e-229 798.5 550 79.8
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 6.6e-224 780.8 557 77.4
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 9.0e-189 664.1 553 65.6
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 4.6e-185 651.7 538 66.5
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 5.3e-173 611.7 534 62.9
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 3.4e-172 609.0 549 61.2
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 3.3e-167 592.4 531 61.4
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 4.4e-167 592.0 520 62.5
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.2e-166 589.7 502 64.3
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 3.7e-166 589.0 546 60.3
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 3.8e-163 578.9 537 60.3
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 2.5e-162 576.2 550 60.2
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 4.2e-162 575.5 516 62.4
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 2.1e-161 573.2 546 59.5
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 4.7e-161 572.0 603 55.9
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.3e-158 563.9 541 59.3
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.7e-158 563.5 506 62.6
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.7e-158 563.5 552 58.9
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.2e-158 563.1 513 61.6
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 6.3e-158 561.6 507 60.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 6.3e-158 561.6 531 59.9
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.4e-157 560.5 534 59.6
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 2.6e-156 556.2 553 58.6
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.0e-155 554.3 531 57.8
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.8e-155 552.4 489 62.8
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 8.5e-155 551.2 489 62.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 2.5e-154 549.7 489 62.4
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.1e-153 546.6 526 58.9
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 2.1e-153 546.6 491 62.9
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.7e-153 546.2 497 61.8
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 2.7e-153 546.2 528 59.8
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.0e-152 544.3 541 56.7
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.4e-152 543.9 548 56.9
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 3.5e-148 529.3 543 57.5
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 8.5e-147 524.6 495 59.4
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.5e-146 523.1 501 60.1
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 4.2e-146 522.3 535 57.2
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.7e-145 518.8 501 59.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 8.0e-145 518.1 503 58.3
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.3e-144 516.5 504 59.5
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 8.8e-144 514.6 501 59.3
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.2e-143 514.2 501 59.5
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.5e-143 513.8 513 57.5
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 2.0e-143 513.5 506 58.5
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 2.6e-143 513.1 559 52.8
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 2.6e-143 513.1 559 52.8
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 4.4e-143 512.3 529 56.5
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.3e-142 510.8 509 57.8
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 8.3e-142 508.1 507 58.0
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.2e-140 504.2 511 57.5
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 3.5e-140 502.7 497 57.3
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 3.5e-140 502.7 520 56.3
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 4.5e-140 502.3 515 55.5
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 5.9e-140 501.9 523 56.2
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 7.7e-140 501.5 534 56.0
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.0e-139 501.1 419 65.6
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 6.5e-139 498.4 516 55.6
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 7.2e-138 495.0 532 54.9
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.4e-136 490.7 521 56.2
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 3.0e-136 489.6 520 54.8
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 4.0e-136 489.2 463 59.0
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 4.1e-133 479.2 525 54.1
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.6e-132 477.2 527 54.5
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.7e-132 476.5 479 57.0
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 9.5e-130 468.0 506 52.4
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.4e-128 464.2 500 54.0
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 8.9e-128 461.5 494 54.5
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.5e-127 460.7 517 52.2
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.7e-123 447.2 486 54.1
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.9e-123 446.0 497 52.1
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 8.6e-123 444.9 483 54.0
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.1e-121 440.3 536 51.7
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 8.9e-120 434.9 497 52.9
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.2e-118 430.3 437 54.9
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 2.9e-118 429.9 538 49.8
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 3.9e-115 419.5 450 53.6
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 5.0e-115 419.1 346 64.7
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 8.6e-115 418.3 494 51.0
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 7.3e-114 415.2 515 49.5
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.4e-112 411.0 545 47.7
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.8e-112 410.6 509 50.7
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.1e-112 409.8 545 48.8
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 4.7e-105 386.0 495 47.9
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.9e-101 374.0 500 48.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 2.1e-100 370.5 404 55.4
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 6.0e-100 369.0 501 45.1
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.1e-92 344.0 327 60.9
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.7e-92 343.6 507 45.6
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.9e-82 310.8 529 38.6
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 4.3e-82 309.7 504 44.4
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.6e-82 309.3 510 42.4
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 2.6e-79 300.4 510 42.4
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.2e-78 297.4 300 56.3
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 3.2e-77 293.5 502 39.2
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.3e-74 283.5 569 37.8
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.8e-72 277.7 519 38.9
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 5.8e-71 272.7 279 58.1
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.4e-69 268.1 552 37.0
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.2e-69 266.5 242 63.6
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 6.0e-68 262.7 506 37.7
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 1.9e-61 241.1 355 46.5
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.6e-60 236.9 221 58.4
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 3.9e-51 206.8 555 31.7
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 2.5e-45 187.6 583 29.3
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 3.5e-39 167.2 141 63.1
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.9e-37 161.4 376 35.4
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 5.5e-37 159.8 521 27.3
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.4e-26 123.6 96 66.7
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 4.2e-21 107.1 161 45.3
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 6.3e-17 93.2 107 49.5
Oeu041156.1 Olea europaea HOM05D006568 ORTHO05D008342 1.2e-10 72.4 74 55.4
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 1.1e-08 65.9 52 61.5
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.4e-08 65.5 299 27.4


User provided reference genes

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