Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 9.6e-68 260.0 128 100.0
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 2.4e-66 255.4 128 96.9
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 3.5e-62 241.5 129 91.5
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.3e-61 238.8 128 89.8
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 3.0e-61 238.4 128 89.8
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 3.1e-50 201.8 114 83.3
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 4.1e-50 201.4 126 79.4
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.1e-50 201.4 126 79.4
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 4.1e-50 201.4 125 76.8
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 5.3e-50 201.1 126 79.4
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 5.3e-50 201.1 130 74.6
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 9.0e-50 200.3 119 79.8
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.5e-49 199.5 125 76.8
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 2.0e-49 199.1 130 76.2
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.0e-49 199.1 126 77.8
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 2.0e-49 199.1 120 78.3
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.6e-49 198.7 130 73.1
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 2.6e-49 198.7 126 77.0
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 3.4e-49 198.4 131 72.5
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 3.4e-49 198.4 130 72.3
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 4.5e-49 198.0 131 73.3
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 4.5e-49 198.0 119 77.3
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 4.5e-49 198.0 119 77.3
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 4.5e-49 198.0 119 77.3
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 4.5e-49 198.0 118 80.5
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 5.8e-49 197.6 131 74.0
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 5.8e-49 197.6 120 77.5
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 7.6e-49 197.2 130 74.6
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 1.0e-48 196.8 132 72.7
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 1.0e-48 196.8 120 80.8
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 1.0e-48 196.8 130 73.8
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 1.0e-48 196.8 130 73.8
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.3e-48 196.4 130 72.3
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.3e-48 196.4 130 72.3
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.3e-48 196.4 130 72.3
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 2.2e-48 195.7 130 71.5
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.9e-48 195.3 130 71.5
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 2.9e-48 195.3 115 78.3
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 2.9e-48 195.3 130 73.1
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 3.8e-48 194.9 121 75.2
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 3.8e-48 194.9 125 73.6
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 3.8e-48 194.9 126 73.8
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 5.0e-48 194.5 134 71.6
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 8.4e-48 193.7 130 70.8
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 8.4e-48 193.7 125 72.8
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 8.4e-48 193.7 130 72.3
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 8.4e-48 193.7 131 72.5
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.1e-47 193.4 130 70.8
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.1e-47 193.4 130 71.5
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.4e-47 193.0 130 72.3
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.4e-47 193.0 130 70.0
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 1.4e-47 193.0 130 71.5
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.9e-47 192.6 120 75.8
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.5e-47 192.2 131 71.0
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.5e-47 192.2 130 71.5
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.2e-47 191.8 115 77.4
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 3.2e-47 191.8 115 77.4
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.2e-47 191.8 133 69.9
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 4.2e-47 191.4 115 77.4
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 4.2e-47 191.4 130 71.5
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 4.2e-47 191.4 129 72.1
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 5.5e-47 191.0 125 72.8
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.5e-47 191.0 130 70.8
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 7.1e-47 190.7 120 75.0
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 9.3e-47 190.3 128 71.9
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 9.3e-47 190.3 131 71.0
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 9.3e-47 190.3 126 74.6
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 9.3e-47 190.3 130 69.2
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 9.3e-47 190.3 130 70.8
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.2e-46 189.9 125 70.4
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 1.2e-46 189.9 120 75.0
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 130 69.2
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.1e-46 189.1 115 76.5
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 2.1e-46 189.1 131 68.7
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 2.7e-46 188.7 115 76.5
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 2.7e-46 188.7 130 69.2
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 3.5e-46 188.3 125 68.8
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 3.5e-46 188.3 126 71.4
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.5e-46 188.3 117 74.4
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 3.5e-46 188.3 115 79.1
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 3.5e-46 188.3 125 70.4
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 3.5e-46 188.3 127 71.7
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 6.1e-46 187.6 130 68.5
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.9e-46 187.2 131 67.9
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 7.9e-46 187.2 125 73.6
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 7.9e-46 187.2 125 71.2
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.0e-45 186.8 126 75.4
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 2.3e-45 185.7 130 67.7
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.3e-45 185.7 127 67.7
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.3e-45 185.7 125 69.6
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 3.0e-45 185.3 120 75.0
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 3.9e-45 184.9 133 68.4
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 5.1e-45 184.5 130 71.5
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 8.7e-45 183.7 132 68.2
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 8.7e-45 183.7 130 66.9
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.7e-45 183.7 129 69.0
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.1e-44 183.3 118 72.0
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 1.5e-44 183.0 130 68.5
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.5e-44 182.2 132 68.2
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 3.3e-44 181.8 118 71.2
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 5.7e-44 181.0 140 66.4
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.4e-44 180.6 134 65.7
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 9.7e-44 180.3 132 68.9
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-43 179.9 126 65.1
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.6e-43 179.5 129 65.1
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.6e-43 179.5 133 63.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 2.2e-43 179.1 133 63.9
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 2.8e-43 178.7 133 63.2
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.8e-43 178.7 116 72.4
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 4.8e-43 177.9 112 69.6
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 4.8e-43 177.9 112 69.6
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 6.3e-43 177.6 129 63.6
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 8.2e-43 177.2 131 64.9
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.1e-42 176.8 131 64.9
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.1e-42 176.8 131 64.9
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.1e-42 176.8 131 64.9
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.1e-42 176.8 130 67.7
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 1.4e-42 176.4 133 62.4
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 1.4e-42 176.4 133 61.7
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 1.4e-42 176.4 133 61.7
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 1.4e-42 176.4 131 64.1
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.4e-42 176.4 133 61.7
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.4e-42 176.4 130 68.5
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.4e-42 176.4 132 64.4
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 1.8e-42 176.0 133 61.7
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.4e-42 175.6 108 74.1
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.1e-42 175.3 119 70.6
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 4.1e-42 174.9 134 61.9
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 5.3e-42 174.5 125 65.6
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 5.3e-42 174.5 129 62.0
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 9.0e-42 173.7 117 73.5
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.2e-41 173.3 130 63.1
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 7.7e-41 170.6 128 61.7
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 7.7e-41 170.6 130 64.6
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.0e-40 170.2 113 71.7
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 6.5e-40 167.5 112 71.4
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 8.5e-40 167.2 125 65.6
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 2.5e-39 165.6 120 64.2
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 4.2e-39 164.9 123 67.5
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 5.5e-39 164.5 120 63.3
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 1.6e-38 162.9 138 63.0
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.6e-38 162.9 129 63.6
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 4.6e-38 161.4 123 65.9
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.0e-37 158.7 122 63.9
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.0e-36 156.0 78 97.4
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 4.3e-36 154.8 124 62.9
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 4.3e-36 154.8 131 56.5
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.8e-35 151.4 91 74.7
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 4.1e-34 148.3 131 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 1.7e-32 142.9 102 64.7
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 7.9e-30 134.0 123 53.7
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 6.3e-27 124.4 85 70.6
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 8.8e-21 104.0 77 64.9
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.1e-20 103.6 70 72.9
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 3.3e-20 102.1 56 89.3
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 8.2e-19 97.4 60 75.0
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.8e-18 96.3 77 59.7
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 9.1e-18 94.0 79 58.2
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 5.9e-17 91.3 70 58.6
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 5.5e-15 84.7 76 48.7
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 2.8e-11 72.4 50 62.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 1.1e-10 70.5 95 33.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.1e-07 60.5 51 56.9
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 1.9e-07 59.7 45 62.2


User provided reference genes

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