Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.6e-97 359.4 181 100.0
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.6e-84 316.2 181 89.0
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 4.6e-84 314.7 181 88.4
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 9.4e-69 263.8 156 84.0
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.7e-68 261.5 164 78.0
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 4.7e-68 261.5 168 78.0
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.3e-59 232.6 165 68.5
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.0e-59 231.9 151 74.2
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 1.2e-55 220.3 149 71.1
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.7e-55 219.2 149 71.1
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.5e-55 218.8 165 67.9
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.0e-54 217.2 165 67.3
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.9e-54 215.7 154 69.5
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 2.9e-54 215.7 151 70.2
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 5.0e-54 214.9 149 71.1
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-53 213.8 149 71.1
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.5e-53 213.4 166 65.1
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 3.2e-53 212.2 169 63.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 3.2e-53 212.2 148 69.6
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 7.2e-53 211.1 148 69.6
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 2.1e-52 209.5 147 70.7
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 3.6e-52 208.8 149 68.5
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 3.6e-52 208.8 169 61.5
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 6.1e-52 208.0 160 66.2
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 6.1e-52 208.0 162 61.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 1.8e-51 206.5 162 63.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.8e-51 206.5 158 62.7
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 6.8e-51 204.5 151 66.9
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 6.8e-51 204.5 149 69.1
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 1.5e-50 203.4 154 64.9
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.0e-50 203.0 149 66.4
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 2.6e-50 202.6 152 64.5
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 5.7e-50 201.4 166 61.4
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 7.5e-50 201.1 172 61.0
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 9.8e-50 200.7 150 66.7
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.3e-49 200.3 152 65.8
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 4.8e-49 198.4 151 64.9
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 6.3e-49 198.0 163 60.1
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 8.3e-49 197.6 168 60.7
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 1.1e-48 197.2 132 71.2
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 1.4e-48 196.8 131 71.0
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-48 196.8 159 60.4
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-48 196.8 159 60.4
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.4e-48 196.8 159 60.4
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.4e-48 196.1 159 60.4
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 5.4e-48 194.9 148 65.5
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 1.6e-47 193.4 148 62.2
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.0e-47 193.0 161 60.2
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 3.5e-47 192.2 161 57.8
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 7.7e-47 191.0 159 55.3
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.3e-46 190.3 147 64.6
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.3e-46 189.5 154 63.0
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 3.8e-46 188.7 158 58.2
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.1e-45 187.2 150 62.7
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.9e-45 186.4 148 60.8
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 4.2e-45 185.3 145 62.1
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.2e-44 183.7 147 57.8
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.6e-44 183.3 173 56.1
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 3.6e-44 182.2 153 60.1
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 3.6e-44 182.2 116 75.0
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 6.1e-44 181.4 148 57.4
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 6.1e-44 181.4 148 57.4
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 2.3e-43 179.5 148 57.4
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.3e-43 179.5 239 44.8
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 2.3e-43 179.5 145 61.4
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 5.2e-43 178.3 148 56.1
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 5.2e-43 178.3 153 53.6
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 1.5e-42 176.8 203 48.8
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.6e-42 176.0 129 66.7
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.4e-42 175.6 159 52.8
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.7e-41 173.3 147 55.1
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.1e-40 170.6 140 57.9
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.8e-40 169.9 152 57.9
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 3.1e-40 169.1 152 60.5
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 4.1e-40 168.7 132 59.1
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 5.4e-40 168.3 132 59.1
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.2e-39 167.2 150 59.3
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.3e-38 163.7 167 56.9
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.7e-38 163.3 132 56.1
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 2.3e-38 162.9 132 56.8
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 5.0e-38 161.8 141 62.4
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 6.6e-38 161.4 132 56.1
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.5e-37 160.2 154 53.2
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 4.3e-37 158.7 137 54.0
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 3.6e-36 155.6 126 59.5
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 8.0e-36 154.5 147 51.0
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.2e-34 150.6 128 54.7
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 9.2e-32 141.0 134 52.2
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 7.8e-31 137.9 147 44.9
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.7e-30 136.7 98 66.3
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 8.9e-27 124.4 82 75.6
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.2e-26 124.0 96 70.8
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.2e-26 124.0 108 65.7
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 2.6e-26 122.9 92 72.8
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.7e-25 120.2 163 45.4
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.9e-25 118.6 184 34.8
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 4.9e-25 118.6 108 49.1
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 1.1e-24 117.5 112 58.9
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.1e-24 115.5 80 73.8
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 6.0e-23 111.7 88 58.0
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 3.0e-22 109.4 68 86.8
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 3.3e-21 105.9 73 63.0
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.6e-20 102.4 72 61.1
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 4.7e-20 102.1 86 55.8
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 4.4e-18 95.5 144 34.7
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 4.4e-18 95.5 140 37.9
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 9.9e-18 94.4 66 71.2
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.9e-13 80.1 117 41.0
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 2.0e-10 70.1 168 31.0
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 6.4e-09 65.1 55 56.4
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 4.2e-08 62.4 73 43.8


User provided reference genes

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