Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.0e-196 688.3 350 100.0
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.8e-140 500.7 339 80.2
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.4e-131 471.9 409 64.3
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.2e-121 437.6 409 62.6
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 3.1e-116 422.5 409 59.2
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 7.5e-115 417.9 409 59.2
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 6.0e-96 355.1 243 78.6
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.6e-94 347.8 333 61.0
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.1e-84 317.8 319 58.3
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-67 261.2 160 88.1
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.6e-61 240.7 278 54.0
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-54 217.6 120 93.3
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 5.7e-54 215.7 131 84.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-53 214.5 411 38.4
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-50 203.4 415 35.2
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-46 189.5 288 43.8
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-45 186.4 318 41.2
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-44 183.0 288 42.4
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-40 171.4 399 32.8
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-39 167.5 390 32.1
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.7e-39 165.6 395 33.7
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-37 159.1 248 42.7
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.1e-36 155.2 321 34.3
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-34 151.8 249 41.0
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-33 147.1 236 40.7
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-33 145.6 333 32.7
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 6.1e-32 142.5 195 43.1
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 6.8e-31 139.0 194 45.9
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-31 138.7 210 42.4
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-30 137.9 226 42.9
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-30 137.5 215 40.5
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-30 137.5 332 33.1
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-29 134.8 303 33.7
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-29 134.4 211 42.7
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-28 129.8 374 29.9
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-26 124.4 64 89.1
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.8e-26 123.2 72 83.3
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-25 121.7 248 36.3
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-25 121.7 155 43.9
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-25 119.8 134 47.0
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-24 117.5 216 38.9
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 8.0e-24 115.5 65 87.7
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-23 115.2 248 32.7
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.2e-22 111.7 61 88.5
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-22 110.5 339 31.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-22 109.4 158 41.1
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 5.7e-22 109.4 79 72.2
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-21 108.2 313 32.3
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-20 102.8 346 27.2
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-20 102.4 126 45.2
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-19 101.7 394 28.4
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-19 100.5 254 32.3
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-18 96.7 123 45.5
Nitab4.5_0005762g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-16 89.7 135 45.9
Nitab4.5_0000857g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-16 89.4 145 44.8
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-16 89.0 69 55.1
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-15 88.6 190 36.3
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-15 88.2 170 41.8
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-15 87.4 190 36.3
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-15 86.7 352 25.6
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 8.9e-15 85.5 69 53.6
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-14 84.0 184 38.6
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-14 82.4 69 49.3
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-13 81.6 63 58.7
Nitab4.5_0011092g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-13 81.6 71 53.5
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.3e-13 81.6 69 46.4
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-13 80.9 67 52.2
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-13 80.1 61 59.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-13 79.3 67 52.2
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-13 79.0 369 26.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 8.3e-13 79.0 190 36.3
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-13 79.0 156 37.8
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 2.4e-12 77.4 62 53.2
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.4e-12 77.4 69 47.8
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-12 76.6 61 54.1
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-12 75.9 137 34.3
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 2.0e-11 74.3 138 36.2
Nitab4.5_0000512g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-11 73.6 119 43.7
Nitab4.5_0000936g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-11 73.6 90 41.1
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-11 73.2 65 52.3
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-11 73.2 296 27.7
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-11 72.4 213 32.9
Nitab4.5_0000362g0190 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-10 72.0 63 52.4
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-10 70.9 66 47.0
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-10 70.5 249 29.3
Nitab4.5_0000003g0320 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-10 69.7 62 46.8
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 5.0e-10 69.7 58 50.0
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-10 69.3 160 37.5
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.6e-10 68.9 62 50.0
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.6e-10 68.9 264 28.0
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-09 68.2 247 28.3
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-09 67.8 69 44.9
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-09 67.4 134 35.1
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 3.3e-09 67.0 195 28.7
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-09 67.0 65 44.6
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-09 67.0 65 46.2
Nitab4.5_0000134g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-09 66.6 195 28.7
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-09 66.6 91 36.3
Nitab4.5_0000903g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-08 64.7 56 55.4
Nitab4.5_0000053g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-08 64.3 147 36.7
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-08 64.3 180 32.2
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 2.8e-08 63.9 116 29.3
Actinidia27557 Actinidia chinensis HOM05D021049 ORTHO05D001773 3.6e-08 63.5 333 24.0
Nitab4.5_0000022g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-08 63.5 60 48.3
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 4.7e-08 63.2 215 29.3
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-08 63.2 55 50.9
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 4.7e-08 63.2 56 48.2
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-08 62.8 56 50.0
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-08 62.4 215 29.8
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-08 62.4 74 40.5
Nitab4.5_0007170g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-08 62.4 66 37.9
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-07 61.6 55 49.1
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 61.2 214 30.4
Nitab4.5_0001859g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-07 60.8 58 44.8
Nitab4.5_0007746g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-07 60.5 62 40.3
SalBow6G6357 Salvia bowleyana HOM05D003574 ORTHO05D002175 8.9e-07 58.9 66 36.4
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-06 58.5 62 40.3
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.5e-06 58.2 66 34.8
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 2.0e-06 57.8 66 34.8
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 2.0e-06 57.8 66 34.8
Rhsim07G0168400 Rhododendron simsii HOM05D000995 ORTHO05D002175 3.4e-06 57.0 63 34.9
Nitab4.5_0004222g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-06 56.6 70 35.7
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-06 56.2 62 38.7


User provided reference genes

Program Settings