Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400030102 Solanum tuberosum HOM05D007801 ORTHO05D009763 1.3e-35 152.5 78 100.0
Nitab4.5_0006788g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.2e-20 102.8 82 67.1
Sopen04g024140 Solanum pennellii HOM05D007801 ORTHO05D009763 4.5e-20 100.9 84 67.9
PGSC0003DMG400012798 Solanum tuberosum HOM05D007801 ORTHO05D009763 1.0e-19 99.8 79 68.4
Nitab4.5_0000818g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.3e-19 99.4 83 68.7
Peaxi162Scf00295g00003 Petunia axillaris HOM05D007801 ORTHO05D009763 1.3e-19 99.4 81 67.9
Solyc04g054340.1 Solanum lycopersicum HOM05D007801 ORTHO05D009763 2.9e-19 98.2 84 66.7
Nitab4.5_0008777g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.5e-18 95.9 89 61.8
Peaxi162Scf00611g00068 Petunia axillaris HOM05D007801 ORTHO05D009763 2.8e-17 91.7 86 61.6
Nitab4.5_0000727g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 3.6e-17 91.3 87 60.9
Nitab4.5_0004756g0030 Nicotiana tabacum HOM05D007801 ORTHO05D009763 6.1e-17 90.5 87 60.9
Peaxi162Scf28863g00002 Petunia axillaris HOM05D007801 ORTHO05D009763 1.4e-16 89.4 75 65.3
Peaxi162Scf00204g00033 Petunia axillaris HOM05D007801 ORTHO05D009763 6.8e-16 87.0 86 60.5
Rhsim10G0155500 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.7e-14 82.4 83 54.2
Rhsim10G0155300 Rhododendron simsii HOM05D007801 ORTHO05D009763 6.3e-14 80.5 83 54.2
PGSC0003DMG400016738 Solanum tuberosum HOM05D007801 ORTHO05D009763 6.3e-14 80.5 91 54.9
Rhsim10G0155200 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.0e-11 73.2 81 51.9
Manes.13G088400 Manihot esculenta HOM05D007801 ORTHO05D009763 1.1e-10 69.7 78 48.7
TAR280G0007 Trochodendron aralioides HOM05D007801 ORTHO05D009763 1.9e-10 68.9 83 51.8
Cc07_g15740 Coffea canephora HOM05D007801 ORTHO05D009763 3.3e-10 68.2 88 50.0
Prupe.6G177500 Prunus persica HOM05D007801 ORTHO05D009763 4.3e-10 67.8 83 49.4
FAN19G1576 Fragaria x ananassa HOM05D007801 ORTHO05D009763 5.6e-10 67.4 78 53.8
Manes.12G139700 Manihot esculenta HOM05D007801 ORTHO05D009763 9.5e-10 66.6 84 45.2
COL.COLO4_11043 Corchorus olitorius HOM05D007801 ORTHO05D009763 1.2e-09 66.2 80 50.0
Dinv21964 Davidia involucrata HOM05D007801 ORTHO05D009763 1.2e-09 66.2 77 57.1
Duzib264G0602 Durio zibethinus HOM05D007801 ORTHO05D009763 1.6e-09 65.9 80 53.8
FAN28G2811 Fragaria x ananassa HOM05D007801 ORTHO05D009763 2.1e-09 65.5 78 52.6
FAN23G2938 Fragaria x ananassa HOM05D007801 ORTHO05D009763 2.8e-09 65.1 78 52.6
Nn1g05241 Nelumbo nucifera HOM05D007801 ORTHO05D009763 2.8e-09 65.1 81 48.1
Potri.007G086000 Populus trichocarpa HOM05D007801 ORTHO05D009763 2.8e-09 65.1 81 50.6
SalBow3G2462 Salvia bowleyana HOM05D007801 ORTHO05D009763 3.6e-09 64.7 83 50.6
Thecc.01G109200 Theobroma cacao HOM05D007801 ORTHO05D009763 6.2e-09 63.9 80 51.2
FAN26G2641 Fragaria x ananassa HOM05D007801 ORTHO05D009763 8.0e-09 63.5 78 51.3
Gohir.D12G094400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.0e-08 63.2 79 51.9
Gorai.008G102600 Gossypium raimondii HOM05D007801 ORTHO05D009763 1.0e-08 63.2 79 51.9
Gohir.D03G044800 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.4e-08 62.8 82 46.3
Gorai.003G045900 Gossypium raimondii HOM05D007801 ORTHO05D009763 1.4e-08 62.8 82 46.3
Oeu010979.1 Olea europaea HOM05D007801 ORTHO05D009763 1.8e-08 62.4 87 46.0
Gohir.A12G076100 Gossypium hirsutum HOM05D007801 ORTHO05D009763 3.1e-08 61.6 79 53.2
Manes.13G088201 Manihot esculenta HOM05D007801 ORTHO05D009763 3.1e-08 61.6 83 48.2
Haze_25007 Corylus avellana HOM05D007801 ORTHO05D009763 4.0e-08 61.2 86 46.5
Gohir.A02G133400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 5.2e-08 60.8 82 45.1
CSS0019659 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 6.8e-08 60.5 106 41.5
CSS0041778 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 6.8e-08 60.5 106 41.5
QL06p033111 Quercus lobata HOM05D007801 ORTHO05D009763 6.8e-08 60.5 80 50.0
Cpa.g.c48066 Carica papaya HOM05D007801 ORTHO05D009763 8.9e-08 60.1 78 43.6
Rhsim10G0155400 Rhododendron simsii HOM05D007801 ORTHO05D009763 8.9e-08 60.1 74 47.3
Rhsim10G0155600 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.2e-07 59.7 68 48.5
CiPaw.03G137300 Carya illinoinensis HOM05D007801 ORTHO05D009763 2.0e-07 58.9 83 47.0
Potri.005G081400 Populus trichocarpa HOM05D007801 ORTHO05D009763 3.4e-07 58.2 81 46.9
TAR376G1197 Trochodendron aralioides HOM05D007801 ORTHO05D009763 3.4e-07 58.2 82 41.5
Cfa002725 Carpinus fangiana HOM05D007801 ORTHO05D009763 4.4e-07 57.8 81 45.7
Gorai.003G046000 Gossypium raimondii HOM05D007801 ORTHO05D009763 4.4e-07 57.8 83 47.0
Sabra05G0066600 Salix brachista HOM05D007801 ORTHO05D009763 4.4e-07 57.8 81 45.7
Gohir.D03G044900 Gossypium hirsutum HOM05D007801 ORTHO05D009763 7.5e-07 57.0 83 48.2
Nn5g28972 Nelumbo nucifera HOM05D007801 ORTHO05D009763 9.8e-07 56.6 82 41.5
TWI77G0824 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 1.7e-06 55.8 88 46.6
TAR376G0126 Trochodendron aralioides HOM05D007801 ORTHO05D009763 1.7e-06 55.8 81 39.5
Glyma.18G020600 Glycine max HOM05D007801 ORTHO05D009763 2.2e-06 55.5 80 45.0
TWI74G0355 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 2.9e-06 55.1 84 44.0
Glyma.05G182100 Glycine max HOM05D007801 ORTHO05D009763 3.7e-06 54.7 82 40.2
Glyma.08G139800 Glycine max HOM05D007801 ORTHO05D009763 3.7e-06 54.7 81 40.7
Gohir.A02G133600 Gossypium hirsutum HOM05D007801 ORTHO05D009763 6.4e-06 53.9 84 45.2


User provided reference genes

Program Settings